Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 1.3e-76 289.7 145 100.0
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 1.2e-45 186.8 119 76.5
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 1.3e-39 166.8 105 74.3
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 1.5e-29 133.3 143 51.0
Manes.17G056250 Manihot esculenta HOM05D008848 ORTHO05D008136 7.6e-29 131.0 124 60.5
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 3.8e-20 102.1 118 44.1
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 8.4e-20 100.9 136 41.9
QL07p012771 Quercus lobata HOM05D008848 ORTHO05D008136 1.9e-19 99.8 118 42.4
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 3.3e-16 89.0 114 45.6
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 3.7e-15 85.5 116 38.8
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.7e-15 85.5 139 38.8
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 4.8e-15 85.1 108 46.3
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.8e-15 85.1 112 43.8
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 8.2e-15 84.3 141 37.6
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.1e-14 84.0 109 45.0
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.8e-14 83.2 119 42.9
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 2.4e-14 82.8 136 33.1
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 1.2e-13 80.5 120 39.2
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 1.5e-13 80.1 89 46.1
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.5e-13 80.1 120 41.7
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 1.7e-12 76.6 116 42.2
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 1.7e-12 76.6 106 37.7
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.9e-12 75.9 109 42.2
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 3.8e-12 75.5 121 38.8
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 2.5e-11 72.8 121 38.8
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.2e-11 72.4 80 50.0
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 7.2e-11 71.2 98 40.8
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 7.2e-11 71.2 105 37.1
Ciclev10006601m.g Citrus clementina HOM05D010926 ORTHO05D011735 2.7e-10 69.3 96 38.5
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.6e-10 68.6 128 32.0
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.6e-10 68.6 111 36.0
MD07G1115400 Malus domestica HOM05D010926 ORTHO05D011735 6.1e-10 68.2 87 39.1
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.1e-10 68.2 119 32.8
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.9e-10 67.8 119 32.8
Ciclev10006726m.g Citrus clementina HOM05D010926 ORTHO05D011735 1.0e-09 67.4 111 33.3
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 1.0e-09 67.4 111 34.2
MD02G1210800 Malus domestica HOM05D010926 ORTHO05D011735 1.4e-09 67.0 87 39.1
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.1e-09 65.1 131 30.5
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 8.8e-09 64.3 114 38.6
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 2.5e-08 62.8 124 36.3
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.3e-08 62.4 131 29.8
Nitab4.5_0003050g0040 Nicotiana tabacum HOM05D008848 ORTHO05D008136 5.7e-08 61.6 65 49.2
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 7.4e-08 61.2 114 33.3
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 2.2e-07 59.7 129 33.3
Ciclev10007031m.g Citrus clementina HOM05D010926 ORTHO05D011735 2.2e-07 59.7 83 36.1
Dinv06361 Davidia involucrata HOM05D028634 ORTHO05D022500 2.8e-07 59.3 62 41.9
Prupe.2G137400 Prunus persica HOM05D010926 ORTHO05D011735 4.8e-07 58.5 86 39.5
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.3e-07 58.2 108 34.3
GSVIVG01001261001 Vitis vinifera HOM05D008848 ORTHO05D008136 6.3e-07 58.2 89 34.8
Peaxi162Scf00102g00938 Petunia axillaris HOM05D008848 ORTHO05D008136 8.2e-07 57.8 88 38.6
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 8.2e-07 57.8 85 40.0
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.2e-07 57.8 106 33.0
GSVIVG01019271001 Vitis vinifera HOM05D008848 ORTHO05D008136 8.2e-07 57.8 98 32.7
Oeu020786.1 Olea europaea HOM05D009287 ORTHO05D008136 1.1e-06 57.4 105 37.1
Oeu020785.1 Olea europaea HOM05D009287 ORTHO05D008136 1.8e-06 56.6 105 38.1
QL04p038305 Quercus lobata HOM05D010926 ORTHO05D011735 3.1e-06 55.8 83 34.9
Phvul.010G072200 Phaseolus vulgaris HOM05D017052 ORTHO05D011735 4.1e-06 55.5 86 38.4
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 4.1e-06 55.5 118 32.2
Peaxi162Scf01083g00013 Petunia axillaris HOM05D008848 ORTHO05D008136 6.9e-06 54.7 105 32.4
Dinv06358 Davidia involucrata HOM05D028634 ORTHO05D022500 9.1e-06 54.3 53 41.5


User provided reference genes

Program Settings