Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 5.6e-115 417.9 259 100.0
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 3.6e-90 335.5 180 92.8
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 1.6e-82 310.1 196 83.2
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 1.1e-81 307.4 213 75.6
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 3.1e-81 305.8 224 70.1
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 2.6e-80 302.8 216 75.0
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 9.9e-80 300.8 215 73.0
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 1.3e-79 300.4 198 75.3
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 2.9e-79 299.3 211 70.6
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 3.8e-79 298.9 175 82.9
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 6.4e-79 298.1 199 75.4
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 2.4e-78 296.2 213 69.0
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 3.2e-78 295.8 219 70.8
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 5.4e-78 295.0 213 70.4
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 9.3e-78 294.3 175 81.1
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 9.3e-78 294.3 175 80.6
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 1.2e-77 293.9 204 72.5
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 1.2e-77 293.9 199 73.4
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 1.2e-77 293.9 206 72.8
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 1.2e-77 293.9 220 69.1
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 2.7e-77 292.7 215 69.3
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 3.5e-77 292.4 175 80.6
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 7.9e-77 291.2 218 70.6
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 7.9e-77 291.2 219 69.4
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 1.0e-76 290.8 171 80.7
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 1.0e-76 290.8 206 73.8
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 1.0e-76 290.8 198 72.7
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 1.0e-76 290.8 178 79.8
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 1.0e-76 290.8 210 70.0
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 1.3e-76 290.4 173 80.9
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 1.8e-76 290.0 255 65.9
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 2.3e-76 289.7 178 79.8
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 6.7e-76 288.1 173 80.9
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 6.7e-76 288.1 204 71.6
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 8.7e-76 287.7 199 71.4
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 8.7e-76 287.7 200 72.0
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 2.5e-75 286.2 178 78.1
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 4.3e-75 285.4 176 79.0
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 5.6e-75 285.0 217 68.7
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 9.6e-75 284.3 211 68.2
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 1.6e-74 283.5 201 71.1
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 2.1e-74 283.1 178 75.8
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 2.1e-74 283.1 178 75.8
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 2.8e-74 282.7 176 76.7
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 4.8e-74 282.0 176 78.4
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 8.1e-74 281.2 176 76.1
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 1.4e-73 280.4 240 68.8
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 3.1e-73 279.3 171 78.9
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 5.3e-73 278.5 214 68.2
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 2.0e-72 276.6 206 68.4
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 3.4e-72 275.8 223 63.7
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 3.4e-72 275.8 207 68.1
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 5.8e-72 275.0 213 64.8
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 4.9e-71 271.9 177 71.8
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 6.4e-71 271.6 180 71.1
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 2.5e-70 269.6 225 60.9
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 2.5e-70 269.6 213 63.8
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 2.1e-69 266.5 182 75.8
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 2.7e-69 266.2 268 56.7
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 4.6e-69 265.4 176 72.2
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 7.9e-69 264.6 198 65.7
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 1.0e-68 264.2 178 72.5
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 1.0e-68 264.2 171 73.1
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 2.3e-68 263.1 223 62.8
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 3.0e-68 262.7 151 83.4
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 3.9e-68 262.3 178 70.8
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 6.7e-68 261.5 171 71.9
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 1.5e-67 260.4 178 71.3
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 1.9e-67 260.0 212 62.3
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 1.9e-67 260.0 153 81.0
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 3.3e-67 259.2 215 61.4
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 4.3e-67 258.8 190 72.1
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 1.6e-66 256.9 178 69.7
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 2.8e-66 256.1 178 70.2
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 2.8e-66 256.1 178 70.2
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 2.8e-66 256.1 178 70.2
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 3.7e-66 255.8 178 70.2
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 4.8e-66 255.4 158 78.5
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 1.4e-65 253.8 178 69.7
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 3.1e-65 252.7 172 70.9
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 3.4e-64 249.2 174 69.5
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 1.0e-63 247.7 170 71.8
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 1.7e-63 246.9 162 74.1
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 1.1e-62 244.2 168 73.2
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 2.5e-62 243.0 172 69.8
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 9.7e-59 231.1 170 65.3
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 2.8e-58 229.6 157 73.2
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 2.0e-56 223.4 152 71.7
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 1.0e-55 221.1 170 58.8
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 5.5e-54 215.3 214 52.8
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 7.7e-48 194.9 177 56.5
Hma1.2p1_0394F.1_g143400 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 9.4e-46 188.0 155 64.5
Manes.09G072800 Manihot esculenta HOM05D007436 ORTHO05D009398 9.4e-46 188.0 154 67.5
Lj1A1250G60 Lonicera japonica HOM05D007436 ORTHO05D009398 1.0e-44 184.5 116 77.6
Gohir.A05G177200 Gossypium hirsutum HOM05D007436 ORTHO05D009398 5.3e-41 172.2 121 68.6
MELO3C007986.2 Cucumis melo HOM05D007436 ORTHO05D009398 9.1e-41 171.4 118 70.3
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 1.0e-39 167.9 171 53.8
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 1.1e-35 154.5 175 49.1
SEGI_34845 Sequoiadendron giganteum HOM05D007436 ORTHO05D009398 2.0e-32 143.7 82 79.3
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 5.0e-31 139.0 184 42.9
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 1.4e-28 131.0 138 42.8
PRCOL_00006376 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 5.5e-22 109.0 176 38.1
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 3.0e-20 103.2 156 39.1
Lj1A1250G59 Lonicera japonica HOM05D007436 ORTHO05D009398 5.5e-14 82.4 39 94.9


User provided reference genes

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