Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 9.1e-218 760.0 396 100.0
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 3.0e-67 260.0 399 43.1
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 1.2e-65 254.6 391 43.7
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 9.6e-58 228.4 411 39.7
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 2.4e-53 213.8 396 40.2
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 7.1e-53 212.2 408 38.2
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 2.7e-52 210.3 392 37.8
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 3.5e-52 209.9 384 38.3
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 5.1e-51 206.1 404 37.1
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 3.3e-50 203.4 391 38.6
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 2.4e-48 197.2 389 39.1
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 2.0e-47 194.1 381 37.0
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 1.3e-41 174.9 400 34.2
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 1.3e-41 174.9 406 34.0
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 1.1e-40 171.8 402 34.3
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 2.4e-40 170.6 382 36.1
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 7.6e-39 165.6 390 34.4
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 6.5e-38 162.5 382 36.6
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 2.5e-37 160.6 393 32.8
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 2.3e-35 154.1 411 31.9
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 8.2e-33 145.6 390 32.6
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 4.0e-32 143.3 391 31.2
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 4.2e-29 133.3 395 31.9
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 1.9e-26 124.4 428 28.7
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 3.3e-26 123.6 387 31.8
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 3.3e-26 123.6 387 31.8
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 3.7e-25 120.2 424 29.2
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 5.0e-22 109.8 400 28.5
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 8.5e-14 82.4 398 25.9
Atru.chr1.2205 Acer truncatum HOM05D009025 ORTHO05D011227 1.0e-11 75.5 192 35.9
Eucgr.E04236 Eucalyptus grandis HOM05D009025 ORTHO05D011227 5.1e-11 73.2 141 34.0
Haze_07066 Corylus avellana HOM05D009025 ORTHO05D011227 5.7e-10 69.7 259 29.7
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 3.7e-09 67.0 114 34.2
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 6.3e-09 66.2 168 32.1
Zm00001eb199500 Zea mays HOM05D009025 ORTHO05D011227 6.3e-09 66.2 102 37.3
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 2.4e-08 64.3 107 35.5


User provided reference genes

Program Settings