Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G135400 Populus trichocarpa HOM05D005936 ORTHO05D007967 3.4e-164 581.6 301 100.0
Sabra15G0147400 Salix brachista HOM05D005936 ORTHO05D007967 3.0e-152 542.0 296 94.3
CSS0027176 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 7.3e-143 510.8 301 86.7
CSS0048625 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 7.3e-143 510.8 301 86.7
Duzib084G0661 Durio zibethinus HOM05D005936 ORTHO05D007967 1.1e-141 506.9 301 85.4
Thecc.03G170800 Theobroma cacao HOM05D005936 ORTHO05D007967 1.8e-141 506.1 301 83.4
Gohir.D09G040700 Gossypium hirsutum HOM05D005936 ORTHO05D007967 7.6e-140 500.7 301 84.7
Gorai.006G046600 Gossypium raimondii HOM05D005936 ORTHO05D007967 7.6e-140 500.7 301 84.7
CiPaw.04G067400 Carya illinoinensis HOM05D005936 ORTHO05D007967 3.8e-139 498.4 301 83.7
Actinidia34080 Actinidia chinensis HOM05D005936 ORTHO05D007967 8.4e-139 497.3 301 84.4
Eucgr.A02812 Eucalyptus grandis HOM05D005936 ORTHO05D007967 2.4e-138 495.7 301 85.0
QL09p014981 Quercus lobata HOM05D005936 ORTHO05D007967 3.2e-138 495.4 300 83.0
Gohir.A09G039900 Gossypium hirsutum HOM05D005936 ORTHO05D007967 9.3e-138 493.8 301 83.7
Cfa008280 Carpinus fangiana HOM05D005936 ORTHO05D007967 1.0e-136 490.3 301 82.1
GSVIVG01010618001 Vitis vinifera HOM05D005936 ORTHO05D007967 1.3e-136 490.0 302 84.1
Nitab4.5_0005024g0030 Nicotiana tabacum HOM05D005936 ORTHO05D007967 3.3e-135 485.3 307 80.5
DCAR_018171 Daucus carota HOM05D005936 ORTHO05D007967 2.1e-134 482.6 301 80.4
vmacro06722 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 2.1e-134 482.6 304 82.2
Peaxi162Scf00915g00243 Petunia axillaris HOM05D005936 ORTHO05D007967 2.8e-134 482.3 302 79.8
ClCG05G007820 Citrullus lanatus HOM05D005936 ORTHO05D007967 6.2e-134 481.1 301 81.7
Nitab4.5_0001083g0080 Nicotiana tabacum HOM05D005936 ORTHO05D007967 6.2e-134 481.1 308 79.5
CsaV3_3G016820 Cucumis sativus L. HOM05D005936 ORTHO05D007967 8.1e-134 480.7 301 82.4
FAN03G0200 Fragaria x ananassa HOM05D005936 ORTHO05D007967 2.4e-133 479.2 301 81.7
Hma1.2p1_0270F.1_g108440 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 2.4e-133 479.2 301 81.7
FvH4_7g29020 Fragaria vesca HOM05D005936 ORTHO05D007967 4.0e-133 478.4 302 82.1
FAN03G0500 Fragaria x ananassa HOM05D005936 ORTHO05D007967 4.0e-133 478.4 301 81.4
FAN06G1408 Fragaria x ananassa HOM05D005936 ORTHO05D007967 4.0e-133 478.4 302 82.1
PGR042G3346 Punica granatum HOM05D005936 ORTHO05D007967 4.0e-133 478.4 305 81.6
MD07G1264500 Malus domestica HOM05D005936 ORTHO05D007967 5.3e-133 478.0 302 81.5
FAN06G0122 Fragaria x ananassa HOM05D005936 ORTHO05D007967 2.0e-132 476.1 302 81.8
Oeu021758.1 Olea europaea HOM05D005936 ORTHO05D007967 2.6e-132 475.7 301 80.4
Prupe.2G290400 Prunus persica HOM05D005936 ORTHO05D007967 5.8e-132 474.6 300 81.7
CANSAT21G0538 Cannabis sativa HOM05D005936 ORTHO05D007967 7.6e-132 474.2 303 80.9
Rhsim03G0177300 Rhododendron simsii HOM05D005936 ORTHO05D007967 9.9e-132 473.8 311 80.4
PGSC0003DMG400014268 Solanum tuberosum HOM05D005936 ORTHO05D007967 9.9e-132 473.8 301 79.4
Migut.F00375 Erythranthe guttata HOM05D005936 ORTHO05D007967 1.7e-131 473.0 303 81.2
LjContig00238g0017909 Lotus japonicus HOM05D005936 ORTHO05D007967 6.4e-131 471.1 303 82.5
Phvul.007G066600 Phaseolus vulgaris HOM05D005936 ORTHO05D007967 6.4e-131 471.1 304 81.2
TPR.G17430 Trifolium pratense HOM05D005936 ORTHO05D007967 6.4e-131 471.1 304 81.6
AUR62021235 Chenopodium quinoa HOM05D005936 ORTHO05D007967 1.1e-130 470.3 303 80.9
Solyc03g026210.4 Solanum lycopersicum HOM05D005936 ORTHO05D007967 1.1e-130 470.3 301 79.7
CANSAT21G1747 Cannabis sativa HOM05D005936 ORTHO05D007967 2.4e-130 469.2 301 80.7
TAR374G0336 Trochodendron aralioides HOM05D005936 ORTHO05D007967 2.4e-130 469.2 301 80.1
Ah.13g068310 Amaranthus hybridus HOM05D005936 ORTHO05D007967 4.2e-130 468.4 303 81.2
VMungo0720G1210 Vigna mungo HOM05D005936 ORTHO05D007967 5.5e-130 468.0 304 79.9
Cc00_g24160 Coffea canephora HOM05D005936 ORTHO05D007967 1.2e-129 466.8 305 79.0
THA.LOC104811994 Tarenaya hassleriana HOM05D005936 ORTHO05D007967 1.2e-129 466.8 301 79.7
AT5G52100 Arabidopsis thaliana HOM05D005936 ORTHO05D007967 2.1e-129 466.1 302 79.5
Ciclev10005510m.g Citrus clementina HOM05D005936 ORTHO05D007967 2.7e-129 465.7 290 81.7
RcHm_v2.0_Chr1g0376731 Rosa chinensis HOM05D005936 ORTHO05D007967 3.5e-129 465.3 300 79.7
Nn1g01364 Nelumbo nucifera HOM05D005936 ORTHO05D007967 4.6e-129 464.9 301 78.4
Sp6g14350 Schrenkiella parvula HOM05D005936 ORTHO05D007967 6.0e-129 464.5 303 78.2
SpUn0060_0040 Schrenkiella parvula HOM05D005936 ORTHO05D007967 6.0e-129 464.5 303 78.2
Lalb_Chr21g0304951 Lupinus albus HOM05D005936 ORTHO05D007967 7.9e-129 464.2 303 80.9
BraA03t10875Z Brassica rapa HOM05D005936 ORTHO05D007967 1.3e-128 463.4 302 79.1
Carub.0008s1218 Capsella rubella HOM05D005936 ORTHO05D007967 1.3e-128 463.4 302 78.5
Aa31LG3G8470 Aethionema arabicum HOM05D005936 ORTHO05D007967 2.3e-128 462.6 307 77.9
AUR62016030 Chenopodium quinoa HOM05D005936 ORTHO05D007967 2.3e-128 462.6 310 78.4
AL8G26470 Arabidopsis lyrata HOM05D005936 ORTHO05D007967 3.0e-128 462.2 303 79.2
Medtr1g101400 Medicago truncatula HOM05D005936 ORTHO05D007967 3.9e-128 461.8 304 80.6
PSO478G3778 Papaver somniferum HOM05D005936 ORTHO05D007967 3.9e-128 461.8 302 80.1
Glyma.10G238800 Glycine max HOM05D005936 ORTHO05D007967 5.1e-128 461.5 303 80.2
BcaC01g06163 Brassica carinata HOM05D005936 ORTHO05D007967 8.7e-128 460.7 303 78.9
BolC3t14249H Brassica oleracea HOM05D005936 ORTHO05D007967 8.7e-128 460.7 303 78.9
COL.COLO4_14264 Corchorus olitorius HOM05D005936 ORTHO05D007967 1.5e-127 459.9 301 79.1
SalBow1G7635 Salvia bowleyana HOM05D005936 ORTHO05D007967 1.5e-127 459.9 301 77.4
BcaB01g04183 Brassica carinata HOM05D005936 ORTHO05D007967 1.9e-127 459.5 303 78.5
Aqoxy7G00442 Aquilegia oxysepala HOM05D005936 ORTHO05D007967 7.4e-127 457.6 301 77.4
HanXRQChr13g0405681 Helianthus annuus HOM05D005936 ORTHO05D007967 3.7e-126 455.3 303 77.9
arahy.Tifrunner.gnm1.ann1.UTGK89 Arachis hypogaea HOM05D005936 ORTHO05D007967 1.1e-125 453.8 309 77.0
Lsat_1_v5_gn_8_7461 Lactuca sativa HOM05D005936 ORTHO05D007967 3.1e-125 452.2 303 78.9
ATR0757G004 Amborella trichopoda HOM05D005936 ORTHO05D007967 2.6e-124 449.1 302 75.2
EL10Ac3g05696 Beta vulgaris HOM05D005936 ORTHO05D007967 1.1e-122 443.7 302 77.5
PSO782G1152 Papaver somniferum HOM05D005936 ORTHO05D007967 9.3e-122 440.7 292 78.8
A03p15850 Brassica napus HOM05D005936 ORTHO05D007967 3.5e-121 438.7 292 77.7
ECA233G0165 Erigeron canadensis HOM05D005936 ORTHO05D007967 4.6e-121 438.3 272 81.6
Manes.06G143900 Manihot esculenta HOM05D005936 ORTHO05D007967 3.0e-120 435.6 262 83.2
Hma1.2p1_0010F.1_g006890 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 6.7e-120 434.5 262 84.4
Dinv28478 Davidia involucrata HOM05D005936 ORTHO05D007967 4.8e-118 428.3 262 82.8
C03p18520 Brassica napus HOM05D005936 ORTHO05D007967 1.4e-117 426.8 317 71.9
arahy.Tifrunner.gnm1.ann1.AYWY8E Arachis hypogaea HOM05D005936 ORTHO05D007967 5.3e-117 424.9 330 71.5
MELO3C006876.2 Cucumis melo HOM05D005936 ORTHO05D007967 5.9e-116 421.4 264 82.2
TWI23G0201 Tripterygium wilfordii HOM05D005936 ORTHO05D007967 2.2e-115 419.5 293 74.7
Lj1C993G3 Lonicera japonica HOM05D005936 ORTHO05D007967 7.2e-114 414.5 303 74.6
Os03g0118600 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 2.1e-113 412.9 291 70.1
MBI12_g29760_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 8.2e-110 401.0 301 71.4
Haze_13754 Corylus avellana HOM05D005936 ORTHO05D007967 1.8e-109 399.8 273 77.3
Psat6g200960 Pisum sativum HOM05D005936 ORTHO05D007967 1.3e-107 393.7 241 83.4
unitig_0.g2488 Utricularia gibba HOM05D005936 ORTHO05D007967 2.2e-107 392.9 303 67.7
Ca_10793_v3 Cicer arietinum L. HOM05D005936 ORTHO05D007967 6.5e-107 391.3 265 78.1
CDE09G1316 Ceratophyllum demersum HOM05D005936 ORTHO05D007967 7.7e-100 367.9 241 76.8
Sed0016287 Sechium edule HOM05D005936 ORTHO05D007967 5.0e-99 365.2 220 83.6
SEGI_11434 Sequoiadendron giganteum HOM05D005936 ORTHO05D007967 2.1e-97 359.8 286 62.9
Actinidia32894 Actinidia chinensis HOM05D005936 ORTHO05D007967 1.1e-93 347.4 242 76.9
TAR375G0526 Trochodendron aralioides HOM05D005936 ORTHO05D007967 1.0e-91 340.9 263 69.6
Thhalv10014460m.g Eutrema salsugineum HOM05D005936 ORTHO05D007967 2.2e-91 339.7 228 77.2
Pp3c21_9920 Physcomitrium patens HOM05D005936 ORTHO05D007967 2.6e-87 326.2 278 58.6
Glyma.20G155600 Glycine max HOM05D005936 ORTHO05D007967 1.6e-84 317.0 220 76.8
vmacro06720 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 2.2e-83 313.2 265 64.5
Mapoly0001s0282 Marchantia polymorpha HOM05D005936 ORTHO05D007967 6.5e-83 311.6 269 60.2
SMO367G1305 Selaginella moellendorffii HOM05D005936 ORTHO05D007967 1.1e-82 310.8 266 58.3
Hund04704 Selenicereus undatus HOM05D005936 ORTHO05D007967 1.5e-79 300.4 250 65.6
MD01G1197100 Malus domestica HOM05D005936 ORTHO05D007967 2.2e-78 296.6 321 57.0
Zm00001eb001140 Zea mays HOM05D005936 ORTHO05D007967 3.1e-69 266.2 180 71.7
CBR_g30244 Chara braunii HOM05D005936 ORTHO05D007967 6.6e-67 258.5 284 47.9
MBI12_g45864_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.1e-65 253.4 223 63.7
MD01G1197000 Malus domestica HOM05D005936 ORTHO05D007967 1.0e-64 251.1 310 52.9
MBI18_g06814_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 4.1e-61 239.2 211 61.6
MSTRG.8763 Avicennia marina HOM05D005936 ORTHO05D007967 5.4e-61 238.8 157 79.6
MBI18_g40469_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 3.5e-60 236.1 182 69.2
Cpa.g.sc107.7 Carica papaya HOM05D005936 ORTHO05D007967 6.0e-60 235.3 157 80.9
CAN.G548.3 Capsicum annuum HOM05D005936 ORTHO05D007967 5.0e-59 232.3 157 77.1
CARHR265020 Cardamine hirsuta HOM05D005936 ORTHO05D007967 8.6e-59 231.5 159 76.1
AagrBONN_evm.TU.Sc2ySwM_340.388 Anthoceros agrestis HOM05D003851 ORTHO05D005657 5.2e-56 222.2 218 55.5
Duzib205G1997 Durio zibethinus HOM05D005936 ORTHO05D007967 2.9e-54 216.5 227 57.3
Sopen03g005080 Solanum pennellii HOM05D005936 ORTHO05D007967 9.2e-53 211.5 157 73.2
Os03g0117000 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 2.0e-47 193.7 186 57.0
MBI09_g40772_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.7e-46 190.7 152 67.8
FAN01G1428 Fragaria x ananassa HOM05D005936 ORTHO05D007967 5.4e-45 185.7 194 56.7
Cpa.g.sc107.8 Carica papaya HOM05D005936 ORTHO05D007967 1.2e-44 184.5 105 86.7
MBI18_g34964_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.7e-44 183.3 152 64.5
MBI18_g28463_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 6.6e-43 178.7 153 64.1
MBI08_g23116_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.3e-38 164.5 137 64.2
MBI07_g12175_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.0e-31 140.6 156 53.8
MBI15_g15729_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.8e-17 93.6 83 62.7
RcHm_v2.0_Chr1g0376771 Rosa chinensis HOM05D005936 ORTHO05D342530 4.2e-13 79.7 134 41.0
MBI16_g19597_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.5e-10 71.2 86 50.0


User provided reference genes

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