Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 5.0e-134 481.1 241 100.0
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 1.7e-126 456.1 241 93.8
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 9.5e-109 397.1 238 82.4
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 3.7e-105 385.2 245 78.0
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 6.4e-105 384.4 238 79.8
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 6.4e-105 384.4 235 80.9
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 3.2e-104 382.1 246 76.0
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 7.0e-104 380.9 239 78.2
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.2e-103 380.2 249 76.3
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.7e-103 379.0 249 76.3
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 3.5e-103 378.6 246 76.8
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 3.5e-103 378.6 248 76.2
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 5.9e-103 377.9 237 77.6
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.0e-102 377.1 244 77.5
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.7e-102 376.3 239 77.8
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 2.3e-102 375.9 249 75.5
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.0e-102 374.8 238 77.3
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 5.0e-102 374.8 235 79.1
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 8.6e-102 374.0 251 74.1
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 8.6e-102 374.0 244 75.8
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.9e-101 372.9 242 77.3
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 1.9e-101 372.9 236 78.8
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 2.5e-101 372.5 238 76.5
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.3e-101 372.1 253 75.1
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 3.3e-101 372.1 244 76.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.2e-100 370.2 253 74.7
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.1e-100 369.4 244 75.8
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 2.8e-100 369.0 242 76.0
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 3.6e-100 368.6 235 76.6
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 4.7e-100 368.2 234 77.8
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 8.0e-100 367.5 237 76.8
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 2.3e-99 365.9 239 75.3
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.1e-99 365.5 244 74.2
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 4.0e-99 365.2 238 74.8
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 5.2e-99 364.8 234 75.6
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 2.0e-98 362.8 236 73.7
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 2.0e-98 362.8 237 75.1
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.4e-98 361.7 234 74.4
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 5.8e-98 361.3 225 76.9
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 7.5e-98 360.9 241 74.3
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 9.8e-98 360.5 229 76.9
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 2.9e-97 359.0 225 77.8
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 2.9e-97 359.0 227 78.4
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 6.4e-97 357.8 242 73.6
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.9e-96 356.3 244 73.0
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.1e-96 355.1 241 72.6
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 7.0e-96 354.4 241 72.2
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 7.0e-96 354.4 241 72.6
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 1.2e-95 353.6 245 71.4
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 1.2e-95 353.6 240 73.3
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.6e-95 353.2 239 72.4
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.6e-95 353.2 235 74.5
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.7e-95 352.4 231 74.9
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 3.5e-95 352.1 235 74.0
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 4.6e-95 351.7 229 75.1
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 6.0e-95 351.3 236 72.0
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.7e-94 349.7 240 72.5
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 1.7e-94 349.7 236 74.2
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.3e-94 349.4 233 73.8
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 3.0e-94 349.0 237 73.4
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 6.6e-94 347.8 235 73.2
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.5e-93 346.7 241 72.2
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.9e-93 346.3 241 71.4
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.5e-93 345.9 218 77.5
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 3.6e-92 342.0 236 71.6
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.1e-91 340.5 218 76.1
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 2.3e-91 339.3 302 58.9
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 3.1e-91 339.0 231 71.4
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 6.8e-91 337.8 239 70.7
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 2.0e-90 336.3 231 71.4
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 2.6e-90 335.9 211 75.8
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.6e-90 335.9 230 71.7
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.4e-90 335.5 226 73.0
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 4.4e-90 335.1 199 81.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 2.2e-89 332.8 244 66.8
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 4.9e-89 331.6 241 67.6
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.4e-88 330.1 243 69.5
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.9e-88 329.7 246 69.1
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 2.4e-88 329.3 240 69.6
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 4.1e-88 328.6 228 71.5
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 7.1e-88 327.8 235 68.9
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 9.2e-88 327.4 195 80.0
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 1.2e-87 327.0 232 71.1
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 4.6e-87 325.1 228 71.5
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.3e-86 323.6 234 69.7
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.3e-86 323.6 234 69.7
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 3.9e-86 322.0 233 69.5
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 1.5e-85 320.1 236 68.2
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 1.5e-85 320.1 236 68.2
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 1.5e-85 320.1 227 70.0
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 3.3e-85 318.9 204 75.5
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 5.6e-85 318.2 237 66.7
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 8.1e-84 314.3 276 67.0
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.4e-83 313.5 231 67.5
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.2e-82 310.5 195 76.4
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.2e-82 310.5 195 77.4
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 1.7e-81 306.6 230 62.6
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 2.2e-81 306.2 228 64.9
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 1.1e-80 303.9 218 67.9
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.9e-80 303.1 204 73.5
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.3e-78 297.0 233 64.8
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 6.6e-78 294.7 179 78.2
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.9e-77 293.1 238 60.1
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 2.8e-76 289.3 199 72.4
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 7.1e-72 274.6 197 72.6
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 2.7e-71 272.7 194 69.6
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.3e-70 270.4 194 65.5
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 5.1e-70 268.5 202 66.8
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 2.1e-63 246.5 240 54.2
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.3e-62 243.8 142 80.3
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 5.1e-62 241.9 220 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 3.8e-57 225.7 210 55.7
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 3.8e-57 225.7 176 61.9
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 4.9e-57 225.3 193 59.1
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 9.3e-56 221.1 141 75.9
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 2.3e-54 216.5 241 49.0
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 9.0e-51 204.5 128 76.6
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 4.5e-34 149.1 184 45.1
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.8e-28 129.0 89 71.9
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 8.5e-25 118.2 279 31.9
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 2.5e-24 116.7 208 35.1
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 2.0e-21 107.1 184 38.6
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 4.8e-20 102.4 169 38.5
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 6.7e-14 82.0 49 75.5
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 7.5e-13 78.6 61 62.3
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 6.3e-12 75.5 49 69.4
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 3.8e-09 66.2 251 29.9
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 9.4e-08 61.6 34 76.5


User provided reference genes

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