Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 2.1e-55 218.8 112 100.0
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 3.7e-47 191.4 108 88.9
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 3.1e-46 188.3 108 87.0
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 5.3e-38 161.0 109 78.0
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 2.5e-35 152.1 106 72.6
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 9.4e-35 150.2 108 70.4
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 1.6e-34 149.4 109 70.6
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 2.7e-34 148.7 107 70.1
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 1.4e-33 146.4 95 76.8
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 2.3e-33 145.6 115 69.6
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 2.3e-33 145.6 77 88.3
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 3.9e-33 144.8 79 89.9
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 3.9e-33 144.8 93 78.5
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 5.1e-33 144.4 116 71.6
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 5.1e-33 144.4 82 84.1
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 6.7e-33 144.1 118 62.7
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 6.7e-33 144.1 76 88.2
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 8.8e-33 143.7 75 89.3
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 1.5e-32 142.9 93 80.6
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.0e-32 142.5 104 73.1
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.0e-32 142.5 104 73.1
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 2.6e-32 142.1 86 81.4
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 4.4e-32 141.4 101 72.3
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 4.4e-32 141.4 93 80.6
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 5.7e-32 141.0 74 87.8
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 7.4e-32 140.6 106 70.8
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 9.7e-32 140.2 105 69.5
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.3e-31 139.8 104 72.1
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 1.3e-31 139.8 104 67.3
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 2.2e-31 139.0 103 71.8
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 2.2e-31 139.0 125 59.2
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.8e-31 138.7 75 86.7
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.8e-31 138.7 75 86.7
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 3.7e-31 138.3 87 77.0
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 3.7e-31 138.3 75 85.3
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 3.7e-31 138.3 79 84.8
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 6.3e-31 137.5 99 69.7
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.3e-31 137.5 75 85.3
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.3e-31 137.5 75 85.3
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 6.3e-31 137.5 111 70.3
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 8.2e-31 137.1 87 75.9
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 8.2e-31 137.1 76 82.9
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 8.2e-31 137.1 108 71.3
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 1.1e-30 136.7 106 70.8
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.1e-30 136.7 75 84.0
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 1.4e-30 136.3 93 69.9
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 1.4e-30 136.3 77 84.4
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.4e-30 136.3 99 70.7
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 2.4e-30 135.6 78 80.8
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 3.1e-30 135.2 85 81.2
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 3.1e-30 135.2 79 81.0
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 4.1e-30 134.8 77 84.4
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 5.3e-30 134.4 109 67.9
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 5.3e-30 134.4 87 75.9
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 6.9e-30 134.0 96 67.7
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 6.9e-30 134.0 75 86.7
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 9.1e-30 133.7 91 75.8
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 9.1e-30 133.7 77 84.4
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 9.1e-30 133.7 74 87.8
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 1.2e-29 133.3 104 68.3
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 1.5e-29 132.9 76 84.2
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 1.5e-29 132.9 86 74.4
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 2.0e-29 132.5 97 68.0
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 2.0e-29 132.5 87 74.7
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 2.6e-29 132.1 72 87.5
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 3.4e-29 131.7 79 81.0
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 3.4e-29 131.7 78 82.1
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 3.4e-29 131.7 79 81.0
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 4.5e-29 131.3 86 73.3
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 5.9e-29 131.0 78 80.8
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 7.7e-29 130.6 142 53.5
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 1.0e-28 130.2 84 77.4
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 1.3e-28 129.8 78 82.1
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 1.7e-28 129.4 107 64.5
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 1.7e-28 129.4 76 81.6
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 2.2e-28 129.0 79 78.5
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 2.2e-28 129.0 79 78.5
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 2.2e-28 129.0 79 78.5
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 2.9e-28 128.6 103 65.0
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 2.9e-28 128.6 79 78.5
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 2.9e-28 128.6 79 78.5
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 2.9e-28 128.6 79 78.5
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 8.5e-28 127.1 80 76.2
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.4e-27 126.3 81 76.5
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 1.4e-27 126.3 107 63.6
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 1.9e-27 125.9 74 79.7
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 4.2e-27 124.8 107 62.6
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 4.2e-27 124.8 84 73.8
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 5.5e-27 124.4 109 65.1
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 2.7e-26 122.1 74 79.7
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 2.7e-26 122.1 78 74.4
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 2.7e-26 122.1 106 63.2
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 8.0e-26 120.6 63 84.1
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.8e-25 119.4 65 78.5
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 6.7e-25 117.5 66 75.8
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.1e-24 116.7 89 65.2
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 2.0e-24 115.9 89 62.9
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.3e-23 113.2 101 58.4
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 7.0e-22 107.5 65 75.4
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 3.5e-21 105.1 70 71.4
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 4.5e-21 104.8 107 53.3
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 7.7e-21 104.0 83 63.9
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 5.0e-20 101.3 82 64.6
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 9.1e-14 80.5 87 54.0
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 3.5e-13 78.6 64 53.1
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 1.1e-11 73.6 89 51.7
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 1.2e-10 70.1 105 47.6
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 1.2e-10 70.1 43 79.1
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 3.0e-09 65.5 42 78.6
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 4.0e-09 65.1 60 65.0
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 3.7e-07 58.5 41 78.0


User provided reference genes

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