Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 8.1e-169 597.0 315 100.0
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 4.3e-77 292.4 318 58.2
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 5.6e-77 292.0 316 57.9
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 7.3e-77 291.6 320 58.4
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 9.9e-74 281.2 324 54.9
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 3.9e-70 269.2 316 56.3
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 4.0e-67 259.2 319 54.9
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 4.0e-67 259.2 301 55.5
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 4.0e-67 259.2 301 55.5
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 4.0e-67 259.2 301 55.5
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.0e-66 256.9 301 54.8
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 7.1e-64 248.4 311 54.3
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 1.6e-63 247.3 319 48.9
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 3.5e-63 246.1 320 52.2
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 3.5e-63 246.1 324 51.2
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 7.9e-63 245.0 311 52.4
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 1.9e-61 240.4 299 55.2
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 6.9e-59 231.9 274 56.2
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 9.9e-58 228.0 305 50.8
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.1e-56 224.6 272 54.8
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 2.4e-56 223.4 306 48.0
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 2.7e-55 219.9 283 51.6
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 8.7e-54 214.9 271 53.9
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 1.5e-53 214.2 315 50.5
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 3.3e-53 213.0 277 53.1
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 4.3e-53 212.6 309 47.9
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 2.4e-51 206.8 312 46.5
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 3.1e-51 206.5 322 49.1
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 6.9e-51 205.3 307 48.2
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 1.2e-50 204.5 323 48.0
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 2.0e-50 203.8 322 47.8
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 5.5e-48 195.7 327 46.5
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 1.2e-47 194.5 313 45.4
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 2.1e-47 193.7 317 45.7
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 4.6e-47 192.6 316 44.3
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 6.0e-47 192.2 323 48.3
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 2.3e-46 190.3 326 45.7
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 3.9e-46 189.5 315 45.4
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 3.9e-46 189.5 225 57.3
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 5.7e-45 185.7 326 44.8
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 1.6e-44 184.1 280 47.9
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 2.8e-44 183.3 315 45.7
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 1.4e-43 181.0 314 43.6
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 5.0e-41 172.6 305 44.6
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 6.5e-41 172.2 319 43.3
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 1.9e-40 170.6 320 41.6
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 4.6e-39 166.0 314 42.0
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 1.0e-38 164.9 304 46.4
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 3.0e-38 163.3 323 45.2
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 8.8e-38 161.8 275 44.0
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 5.7e-37 159.1 325 42.2
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 1.3e-36 157.9 216 50.9
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 6.3e-36 155.6 341 38.4
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 1.4e-35 154.5 312 40.1
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 1.8e-35 154.1 289 43.9
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 6.9e-35 152.1 377 34.5
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 6.9e-35 152.1 312 40.1
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 4.5e-34 149.4 299 40.5
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 5.9e-34 149.1 351 39.9
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 1.7e-33 147.5 345 40.3
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 3.8e-33 146.4 319 41.4
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 5.0e-33 146.0 308 38.6
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 6.5e-33 145.6 167 52.7
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 1.1e-32 144.8 343 38.8
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 1.4e-32 144.4 345 38.8
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 3.2e-32 143.3 287 41.1
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 5.5e-32 142.5 338 39.1
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 7.2e-32 142.1 287 40.4
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 7.2e-32 142.1 258 44.2
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 6.1e-31 139.0 280 43.2
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 2.2e-28 130.6 312 35.6
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 2.4e-27 127.1 389 33.2
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 3.1e-27 126.7 308 38.6
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 1.9e-24 117.5 327 34.9
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 5.5e-24 115.9 317 33.4
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 4.7e-23 112.8 288 37.5
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 3.0e-22 110.2 273 38.5
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 5.2e-22 109.4 195 44.1
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 5.7e-21 105.9 305 36.1
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 5.7e-21 105.9 316 34.2
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 2.2e-20 104.0 357 32.2
BcaB08g35518 Brassica carinata HOM05D007548 ORTHO05D009527 3.7e-20 103.2 331 35.0
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 3.7e-20 103.2 271 36.2
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 1.8e-19 100.9 326 33.1
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 1.8e-19 100.9 326 33.1
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 1.8e-19 100.9 326 33.1
A10p09560 Brassica napus HOM05D007548 ORTHO05D009527 2.4e-19 100.5 326 32.5
BraA10t43031Z Brassica rapa HOM05D007548 ORTHO05D009527 3.1e-19 100.1 328 33.5
arahy.Tifrunner.gnm1.ann1.1QTB59 Arachis hypogaea HOM05D007548 ORTHO05D009527 1.0e-17 95.1 139 45.3
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 7.2e-16 89.0 282 35.1
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 1.2e-15 88.2 331 34.4
arahy.Tifrunner.gnm1.ann1.Z61DE3 Arachis hypogaea HOM05D007548 ORTHO05D009527 9.7e-13 78.6 212 36.3
BolC2t08158H Brassica oleracea HOM05D007548 ORTHO05D009527 5.3e-11 72.8 358 27.9
A02p12160 Brassica napus HOM05D007548 ORTHO05D009527 2.0e-10 70.9 358 26.8
Ah.13g067520 Amaranthus hybridus HOM05D007548 ORTHO05D009527 1.3e-09 68.2 250 32.0
BcaC03g14581 Brassica carinata HOM05D007548 ORTHO05D009527 3.8e-09 66.6 185 37.3
BcaB05g23992 Brassica carinata HOM05D007548 ORTHO05D009527 9.4e-08 62.0 329 27.4
BraA02t06280Z Brassica rapa HOM05D007548 ORTHO05D009527 3.6e-07 60.1 341 26.1


User provided reference genes

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