Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 0.0e+00 1270.4 647 100.0
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 9.8e-294 1013.1 577 91.2
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 8.7e-250 867.1 656 68.8
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 4.8e-248 861.3 657 67.9
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 4.0e-247 858.2 659 69.3
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 2.9e-237 825.5 665 64.8
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 4.2e-236 821.6 654 65.0
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 6.0e-235 817.8 660 64.4
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 6.7e-234 814.3 660 63.9
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 7.4e-233 810.8 658 64.9
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.6e-227 793.1 650 63.8
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 2.7e-227 792.3 659 63.3
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 1.6e-219 766.5 658 60.8
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 4.6e-219 765.0 643 62.8
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 1.8e-218 763.1 638 63.0
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 6.9e-215 751.1 668 61.5
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 1.2e-214 750.4 657 61.3
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 1.7e-213 746.5 659 59.8
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 1.9e-212 743.0 706 58.4
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 7.9e-211 737.6 691 58.5
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 5.9e-206 721.5 662 57.4
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.2e-203 713.8 659 57.1
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 1.6e-203 713.4 677 56.6
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 8.0e-203 711.1 658 56.8
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 1.3e-200 703.7 659 57.4
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 2.2e-200 703.0 658 57.9
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 7.0e-199 698.0 654 55.7
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 1.2e-198 697.2 659 56.9
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 2.6e-198 696.0 662 57.3
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.6e-198 696.0 645 56.3
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 4.5e-198 695.3 658 56.5
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 1.3e-197 693.7 654 55.5
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 5.0e-197 691.8 656 56.4
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 2.1e-195 686.4 668 57.2
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 1.0e-194 684.1 660 54.8
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 1.8e-194 683.3 667 54.4
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 7.5e-193 677.9 660 54.8
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 2.4e-191 672.9 657 54.8
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.4e-191 672.9 642 55.0
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 4.5e-190 668.7 666 54.4
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 5.9e-190 668.3 655 54.2
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 7.7e-190 667.9 666 53.6
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 1.0e-189 667.5 665 54.3
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 1.3e-189 667.2 658 53.8
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 1.3e-189 667.2 596 58.4
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 2.1e-187 659.8 663 52.9
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 4.7e-187 658.7 665 53.4
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 1.5e-185 653.7 656 54.4
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 7.5e-185 651.4 652 54.1
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 3.7e-184 649.0 663 53.4
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 2.7e-182 642.9 650 53.4
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 1.0e-181 641.0 750 49.2
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.8e-181 639.0 640 53.4
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 3.8e-181 639.0 662 53.2
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 1.9e-180 636.7 779 48.4
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 2.1e-179 633.3 591 58.9
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 4.4e-177 625.5 531 61.8
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 4.5e-174 615.5 614 53.4
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 1.7e-173 613.6 594 54.0
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 6.6e-173 611.7 496 62.3
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 2.5e-172 609.8 662 50.9
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 5.6e-172 608.6 489 63.2
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 5.6e-172 608.6 668 49.9
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 6.1e-171 605.1 658 52.1
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 4.0e-170 602.4 679 50.1
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 3.7e-168 595.9 654 51.4
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 4.1e-167 592.4 659 50.5
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 1.3e-165 587.4 420 70.5
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 4.3e-164 582.4 559 54.9
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 5.2e-162 575.5 655 51.5
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 9.8e-161 571.2 470 61.5
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 1.3e-160 570.9 674 49.9
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 4.1e-159 565.8 602 50.8
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 8.9e-154 548.1 457 62.1
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 6.0e-150 535.4 513 53.2
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 1.9e-148 530.4 713 46.0
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 3.1e-146 523.1 589 50.6
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 5.4e-143 512.3 664 45.8
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 8.1e-139 498.4 702 43.7
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 3.1e-138 496.5 711 43.3
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 1.7e-133 480.7 678 44.7
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 2.1e-131 473.8 700 41.3
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 1.5e-124 451.1 487 48.9
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 7.9e-118 428.7 690 41.3
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 4.5e-113 412.9 800 37.2
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 3.7e-107 393.3 652 41.3
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 2.5e-103 380.6 559 42.8
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 4.2e-103 379.8 559 42.8
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 6.7e-101 372.5 371 53.9
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 1.3e-99 368.2 706 37.5
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 2.3e-93 347.4 583 37.7
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 1.1e-90 338.6 491 45.2
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 3.3e-84 317.0 262 63.4
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 1.9e-79 301.2 258 58.9
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 4.5e-73 280.0 261 57.9
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.4e-69 268.5 380 45.5
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 6.3e-67 259.6 495 34.1
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 7.5e-60 236.1 393 39.9
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 1.0e-56 225.7 393 37.7
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 2.9e-56 224.2 197 58.9
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 5.4e-42 176.8 424 30.9
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 1.6e-38 165.2 207 45.9
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 3.6e-38 164.1 273 37.7
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 4.7e-38 163.7 166 50.6
MSTRG.9383 Avicennia marina HOM05D007228 ORTHO05D009099 4.9e-35 153.7 200 50.0
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 7.8e-33 146.4 383 29.0
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 1.5e-31 142.1 489 28.6
HanXRQChr08g0229021 Helianthus annuus HOM05D007228 ORTHO05D009099 9.9e-28 129.4 132 56.1
Lalb_Chr12g0202661 Lupinus albus HOM05D007228 ORTHO05D009099 8.4e-27 126.3 165 47.9
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 3.0e-24 117.9 507 25.4
Sp6g35490 Schrenkiella parvula HOM05D007228 ORTHO05D009099 1.5e-20 105.5 141 47.5
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 4.9e-19 100.5 84 59.5
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 3.0e-16 91.3 153 38.6
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 3.6e-14 84.3 95 47.4
SEGI_40191 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 5.6e-07 60.5 71 47.9


User provided reference genes

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