Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.8e-128 462.6 230 100.0
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 2.0e-108 396.0 233 85.8
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.0e-104 383.6 230 83.9
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 1.1e-103 380.2 230 81.7
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 3.3e-103 378.6 228 82.0
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 3.7e-102 375.2 229 81.7
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.8e-102 374.8 230 82.2
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 6.3e-102 374.4 230 81.3
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.1e-101 373.6 230 79.6
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.4e-101 373.2 230 82.2
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.4e-101 372.5 230 81.3
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 2.4e-101 372.5 230 80.4
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 3.1e-101 372.1 231 83.5
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.3e-101 371.3 230 81.7
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.3e-101 371.3 230 81.7
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 6.9e-101 370.9 230 80.4
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 1.2e-100 370.2 230 80.9
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.5e-100 369.8 255 76.1
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 3.4e-100 368.6 228 79.8
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 4.5e-100 368.2 230 80.4
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 7.7e-100 367.5 230 80.4
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.0e-99 367.1 226 81.9
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 3.8e-99 365.2 226 81.4
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 5.0e-99 364.8 226 81.0
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 1.1e-98 363.6 230 81.7
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 4.2e-98 361.7 230 80.4
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.2e-97 360.1 228 78.9
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.6e-97 359.8 229 77.7
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.1e-97 359.4 230 77.8
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 3.6e-97 358.6 229 77.3
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.6e-97 358.6 230 79.6
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 7.9e-97 357.5 228 78.5
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.4e-96 356.7 228 76.8
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.3e-96 355.9 228 76.3
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 2.3e-96 355.9 230 78.3
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.3e-96 355.9 230 77.4
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 2.3e-96 355.9 228 79.4
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 5.1e-96 354.8 228 75.9
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 5.1e-96 354.8 227 76.7
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 6.7e-96 354.4 228 77.6
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 8.8e-96 354.0 229 76.0
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.5e-95 353.2 228 76.8
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 3.3e-95 352.1 236 75.4
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 4.4e-95 351.7 227 77.5
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 5.7e-95 351.3 226 77.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 7.4e-95 350.9 228 75.4
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 9.7e-95 350.5 228 81.6
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 1.3e-94 350.1 226 76.1
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.3e-94 350.1 226 77.9
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.3e-94 350.1 226 77.9
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.7e-94 349.7 228 77.2
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 3.7e-94 348.6 227 76.7
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 3.7e-94 348.6 227 76.7
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 4.8e-94 348.2 227 76.2
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 4.8e-94 348.2 227 76.2
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 6.3e-94 347.8 230 73.9
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 6.3e-94 347.8 246 73.6
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.1e-93 347.1 228 75.4
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.1e-93 347.1 228 75.4
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 1.1e-93 347.1 229 76.0
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 1.4e-93 346.7 228 74.6
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.4e-93 346.7 229 75.5
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.8e-93 346.3 235 74.9
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 2.4e-93 345.9 227 76.2
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 2.4e-93 345.9 228 75.4
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 4.1e-93 345.1 228 75.4
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 7.0e-93 344.4 229 76.4
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 7.0e-93 344.4 228 75.4
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 9.1e-93 344.0 230 75.7
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 1.5e-92 343.2 228 74.1
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 3.5e-92 342.0 228 75.4
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.3e-91 340.1 214 79.4
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 2.2e-91 339.3 237 73.4
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 3.8e-91 338.6 232 72.0
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.1e-90 337.0 232 73.3
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.4e-90 336.7 251 69.7
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.6e-89 333.2 244 69.3
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 4.7e-89 331.6 228 72.4
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 8.0e-89 330.9 264 66.3
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.8e-88 329.7 230 74.3
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.8e-88 329.7 212 78.3
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 1.8e-88 329.7 226 71.7
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.1e-87 327.0 211 77.7
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.3e-86 323.6 213 76.5
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 2.4e-85 319.3 212 75.9
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 5.3e-85 318.2 212 73.6
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 3.5e-84 315.5 230 71.7
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.0e-83 313.9 211 73.9
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 3.2e-82 308.9 212 73.6
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 5.5e-82 308.1 226 69.5
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 3.6e-81 305.4 233 67.0
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.4e-80 303.5 239 67.4
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 2.8e-78 295.8 240 64.2
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 7.7e-76 287.7 212 72.6
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.5e-74 283.5 152 86.8
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 1.2e-71 273.9 230 63.9
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.5e-71 273.5 179 78.8
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 5.7e-71 271.6 240 61.2
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.8e-70 269.2 173 70.5
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 4.1e-69 265.4 211 61.6
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 7.7e-68 261.2 211 67.3
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 7.7e-68 261.2 233 60.9
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.8e-65 252.7 230 60.0
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 6.8e-64 248.1 147 77.6
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 8.9e-64 247.7 337 46.9
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.4e-61 240.4 230 57.8
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.0e-59 234.2 161 74.5
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 6.6e-59 231.5 145 81.4
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.1e-58 230.7 123 85.4
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 1.2e-57 227.3 158 63.3
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 1.2e-49 200.7 130 66.2
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.1e-42 177.6 171 52.6
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 6.2e-41 171.8 134 61.2
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 7.5e-39 164.9 159 49.1
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 4.2e-29 132.5 63 93.7
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 7.3e-26 121.7 86 62.8
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.8e-25 119.8 63 81.0
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.6e-25 119.4 68 86.8
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 6.4e-22 108.6 141 44.7
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 8.4e-22 108.2 93 64.5
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.1e-18 97.8 119 49.6
Lalb_Chr14g0365481 Lupinus albus HOM05D006563 ORTHO05D239264 8.4e-06 55.1 39 64.1


User provided reference genes

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