Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 6.6e-137 490.7 254 100.0
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 4.0e-126 454.9 254 91.7
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 2.1e-111 406.0 255 85.5
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 3.6e-98 362.1 255 75.3
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 2.2e-87 326.2 254 65.7
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 4.8e-87 325.1 246 65.9
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.5e-85 318.9 248 65.3
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.5e-85 318.9 248 65.3
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.0e-84 317.4 247 65.2
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 6.5e-84 314.7 259 66.0
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 5.7e-80 301.6 277 60.6
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 4.8e-79 298.5 255 62.7
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 1.4e-78 297.0 218 67.9
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 1.4e-78 297.0 218 67.9
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 1.8e-78 296.6 265 61.1
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 2.4e-78 296.2 226 66.4
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 2.2e-76 289.7 226 67.3
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 6.5e-76 288.1 267 58.8
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 6.5e-76 288.1 227 66.5
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.5e-75 287.0 218 65.6
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 4.2e-75 285.4 264 60.2
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 4.2e-75 285.4 222 65.3
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 7.2e-75 284.6 271 59.0
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 1.6e-74 283.5 228 63.2
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 1.0e-73 280.8 226 63.7
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 6.8e-73 278.1 230 63.5
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 3.4e-72 275.8 222 63.1
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 4.8e-71 271.9 225 60.4
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 6.3e-71 271.6 260 58.8
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 6.3e-71 271.6 225 62.7
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 6.3e-71 271.6 256 58.2
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 1.1e-70 270.8 248 57.3
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 1.1e-70 270.8 217 62.2
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 9.1e-70 267.7 259 56.8
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 2.7e-69 266.2 252 58.7
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 5.9e-69 265.0 236 60.2
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 3.8e-68 262.3 222 59.9
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 3.8e-68 262.3 252 57.1
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 8.5e-68 261.2 260 55.0
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.5e-67 260.4 259 56.0
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.5e-67 260.4 259 56.0
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.5e-67 260.4 259 56.0
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 1.5e-67 260.4 259 57.5
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 1.9e-67 260.0 259 54.4
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 3.2e-67 259.2 257 54.1
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.2e-67 259.2 206 63.6
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 9.4e-67 257.7 258 55.4
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 1.6e-66 256.9 273 52.0
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 3.6e-66 255.8 262 54.2
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 3.6e-66 255.8 255 54.1
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 6.1e-66 255.0 255 54.1
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 1.8e-65 253.4 252 55.2
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 2.3e-65 253.1 255 52.9
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 2.3e-65 253.1 255 52.9
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 2.6e-64 249.6 233 55.8
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 5.4e-62 241.9 244 53.3
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 3.5e-61 239.2 178 65.7
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 5.9e-61 238.4 235 52.3
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 1.0e-60 237.7 210 58.1
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 8.6e-60 234.6 210 57.1
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 8.6e-60 234.6 177 65.5
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 8.6e-60 234.6 177 65.5
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.9e-59 233.4 224 57.1
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 7.3e-59 231.5 205 58.5
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 9.5e-59 231.1 255 52.9
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 9.5e-59 231.1 245 51.4
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.6e-58 230.3 205 58.5
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 2.8e-58 229.6 208 53.8
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.4e-57 227.3 150 70.7
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 1.8e-57 226.9 248 54.0
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 2.6e-56 223.0 157 70.1
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 2.6e-56 223.0 252 48.0
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.7e-55 220.3 234 50.9
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 6.4e-55 218.4 229 49.8
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 2.0e-53 213.4 155 66.5
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 7.8e-53 211.5 246 47.2
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 1.3e-52 210.7 209 53.1
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 3.0e-52 209.5 225 51.6
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 8.6e-52 208.0 225 48.4
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 5.6e-51 205.3 201 55.2
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 9.5e-51 204.5 151 66.9
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 5.2e-49 198.7 223 50.2
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 6.4e-47 191.8 215 49.3
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 1.1e-46 191.0 259 45.2
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 1.4e-46 190.7 141 68.1
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 2.0e-45 186.8 147 64.6
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 2.7e-45 186.4 147 63.9
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 3.5e-45 186.0 144 62.5
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 3.5e-45 186.0 267 42.7
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 3.5e-45 186.0 317 36.9
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 4.6e-45 185.7 147 63.9
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 7.8e-45 184.9 180 52.2
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 2.3e-44 183.3 268 41.4
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.3e-44 183.3 139 66.9
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.1e-43 181.0 139 66.2
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 7.3e-43 178.3 140 62.9
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 9.5e-43 177.9 140 66.4
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 4.7e-42 175.6 224 43.3
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 1.4e-41 174.1 142 63.4
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 1.4e-41 174.1 141 63.1
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 2.3e-41 173.3 141 61.7
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 5.2e-41 172.2 139 62.6
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 2.6e-40 169.9 223 40.8
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 2.6e-40 169.9 281 36.7
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 4.4e-40 169.1 140 60.7
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 4.9e-39 165.6 154 59.7
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 1.4e-38 164.1 142 62.0
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 1.9e-38 163.7 157 54.8
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 2.4e-38 163.3 227 41.9
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.6e-37 160.6 127 61.4
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 4.6e-37 159.1 148 61.5
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 4.7e-34 149.1 149 55.7
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 5.8e-32 142.1 230 36.5
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 2.8e-26 123.2 83 71.1
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 5.2e-25 119.0 163 39.9
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 9.9e-24 114.8 80 57.5
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 1.6e-21 107.5 64 73.4
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.6e-10 70.9 69 49.3
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 4.8e-10 69.3 70 41.4
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 1.1e-09 68.2 99 34.3
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 3.2e-06 56.6 73 34.2
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 7.1e-06 55.5 198 22.7


User provided reference genes

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