Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 3.3e-172 608.2 293 100.0
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 1.5e-145 519.6 295 85.1
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 2.6e-145 518.8 304 86.5
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 4.5e-145 518.1 293 84.6
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 4.5e-145 518.1 293 85.0
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 1.0e-144 516.9 281 86.5
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 1.3e-144 516.5 291 83.8
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 1.3e-144 516.5 291 83.5
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 2.2e-144 515.8 288 85.8
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 3.8e-144 515.0 291 83.8
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 3.8e-144 515.0 293 82.6
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 8.4e-144 513.8 293 83.6
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 9.3e-143 510.4 291 82.8
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 2.1e-142 509.2 284 83.8
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 1.0e-141 506.9 291 83.2
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.8e-141 506.1 293 81.9
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 2.3e-141 505.8 282 84.0
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 3.0e-141 505.4 293 81.2
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 1.1e-140 503.4 283 81.3
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 5.7e-140 501.1 287 81.2
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 5.7e-140 501.1 285 82.5
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 5.7e-140 501.1 284 83.1
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 1.3e-139 500.0 285 82.8
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.6e-139 499.6 278 84.9
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 2.2e-139 499.2 290 81.0
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.8e-139 498.8 278 84.9
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 2.8e-139 498.8 278 84.9
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 3.7e-139 498.4 278 85.3
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 3.7e-139 498.4 288 83.0
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 6.3e-139 497.7 289 80.3
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 1.1e-138 496.9 281 82.9
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 1.8e-138 496.1 328 74.1
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 1.8e-138 496.1 286 82.5
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 3.1e-138 495.4 288 82.6
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 4.1e-138 495.0 284 82.7
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 5.3e-138 494.6 293 79.5
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 9.0e-138 493.8 297 80.1
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.2e-137 493.4 286 82.2
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 1.2e-137 493.4 297 80.1
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 2.6e-137 492.3 288 82.3
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 2.6e-137 492.3 286 82.2
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 4.5e-137 491.5 289 79.6
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 4.5e-137 491.5 288 82.3
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.2e-136 489.2 283 80.6
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 6.5e-136 487.6 317 75.7
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 2.5e-135 485.7 293 79.9
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 3.2e-135 485.3 276 81.2
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 5.5e-135 484.6 277 81.2
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 9.4e-135 483.8 276 81.2
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 1.6e-134 483.0 281 80.1
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 6.1e-134 481.1 311 76.2
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.4e-133 479.9 290 79.0
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 3.0e-133 478.8 288 81.2
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 3.9e-133 478.4 276 77.9
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 3.9e-133 478.4 273 83.2
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 5.1e-133 478.0 293 77.5
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 5.1e-133 478.0 267 84.6
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 8.8e-133 477.2 255 87.5
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 2.0e-132 476.1 279 79.2
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.0e-132 476.1 280 79.6
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 5.7e-132 474.6 288 78.5
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 7.4e-132 474.2 276 78.3
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 9.7e-132 473.8 280 80.7
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 9.7e-132 473.8 288 79.5
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 9.7e-132 473.8 276 77.9
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.2e-131 472.6 293 76.8
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 2.8e-131 472.2 285 77.2
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 3.7e-131 471.9 285 78.9
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 3.7e-131 471.9 276 77.9
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 6.3e-131 471.1 281 78.6
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 1.4e-130 469.9 284 78.9
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 3.1e-130 468.8 281 76.9
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 4.1e-130 468.4 277 79.4
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 4.1e-130 468.4 285 76.5
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 5.3e-130 468.0 329 71.7
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 5.3e-130 468.0 280 78.2
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 6.9e-130 467.6 276 83.0
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 9.1e-130 467.2 290 78.6
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 9.1e-130 467.2 276 76.4
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 2.0e-129 466.1 276 80.4
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 3.4e-129 465.3 277 78.7
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 5.9e-129 464.5 279 79.2
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 2.9e-128 462.2 285 77.5
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 5.0e-128 461.5 284 77.5
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 6.5e-128 461.1 278 75.5
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 1.1e-127 460.3 290 75.9
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.4e-127 459.9 330 69.4
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 3.9e-125 451.8 290 74.8
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 2.0e-124 449.5 281 75.8
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 3.3e-124 448.7 279 76.0
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 4.8e-123 444.9 292 74.3
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 6.3e-123 444.5 295 75.3
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 9.1e-122 440.7 279 74.2
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 9.1e-122 440.7 276 74.6
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 1.5e-121 439.9 279 73.1
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 2.0e-121 439.5 290 72.8
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 2.6e-121 439.1 279 73.8
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.9e-119 433.0 321 67.9
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 8.0e-118 427.6 284 69.4
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 1.8e-117 426.4 285 72.6
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 5.2e-117 424.9 380 60.5
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 6.7e-117 424.5 242 83.5
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.6e-116 422.5 279 72.8
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 2.2e-115 419.5 273 70.7
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 9.1e-114 414.1 283 70.0
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 4.2e-111 405.2 271 71.6
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 1.2e-110 403.7 222 85.1
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 9.7e-108 394.0 241 78.4
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 1.1e-106 390.6 228 82.5
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 1.1e-103 380.6 294 65.6
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.2e-100 370.5 276 60.5
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 4.4e-100 368.6 199 86.9
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 1.4e-98 363.6 210 80.5
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.4e-98 362.8 198 84.8
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.9e-96 355.9 283 63.3
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 2.5e-95 352.8 285 58.9
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 4.9e-91 338.6 226 73.0
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 1.4e-90 337.0 272 59.2
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 7.8e-89 331.3 189 81.5
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 7.8e-89 331.3 189 81.5
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.1e-79 300.8 229 67.7
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 3.4e-76 289.3 226 61.1
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 6.4e-75 285.0 272 53.3
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 4.7e-70 268.9 313 50.8
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.0e-64 251.1 164 75.6
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 8.6e-64 248.1 155 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 1.9e-63 246.9 183 61.7
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 5.4e-58 228.8 210 51.0
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 6.6e-56 221.9 131 78.6
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.1e-54 216.9 262 44.7
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 1.1e-47 194.5 191 52.4
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.6e-38 164.1 98 76.5
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 6.2e-38 162.2 211 41.7
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 9.0e-37 158.3 272 36.8
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 1.2e-28 131.3 116 59.5
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 2.2e-27 127.1 95 62.1
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 1.4e-16 91.3 67 61.2
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 2.6e-12 77.0 45 77.8
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 7.7e-12 75.5 53 66.0


User provided reference genes

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