Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G088200 Populus trichocarpa HOM05D006000 ORTHO05D007749 1.3e-285 985.7 499 100.0
Sabra15G0111200 Salix brachista HOM05D006000 ORTHO05D007749 6.5e-245 850.5 480 90.0
MD14G1166100 Malus domestica HOM05D006000 ORTHO05D007749 3.6e-171 605.5 477 62.7
Cfa018908 Carpinus fangiana HOM05D006000 ORTHO05D007749 7.6e-169 597.8 479 64.5
MD06G1160100 Malus domestica HOM05D006000 ORTHO05D007749 6.4e-168 594.7 477 62.1
Manes.06G113400 Manihot esculenta HOM05D006000 ORTHO05D007749 7.8e-166 587.8 478 63.2
Haze_07292 Corylus avellana HOM05D006000 ORTHO05D007749 1.6e-163 580.1 511 61.3
Prupe.5G160400 Prunus persica HOM05D006000 ORTHO05D007749 4.8e-163 578.6 477 60.6
RcHm_v2.0_Chr7g0191691 Rosa chinensis HOM05D006000 ORTHO05D007749 1.1e-162 577.4 474 63.3
Atru.chr9.985 Acer truncatum HOM05D006000 ORTHO05D007749 2.2e-160 569.7 471 63.1
QL10p005632 Quercus lobata HOM05D006000 ORTHO05D007749 7.1e-159 564.7 476 61.8
CANSAT80G1864 Cannabis sativa HOM05D006000 ORTHO05D007749 2.0e-153 546.6 478 57.7
Gohir.D03G103100 Gossypium hirsutum HOM05D006000 ORTHO05D007749 7.6e-153 544.7 471 60.7
Gohir.A03G063200 Gossypium hirsutum HOM05D006000 ORTHO05D007749 9.9e-153 544.3 471 60.5
FAN18G3028 Fragaria x ananassa HOM05D006000 ORTHO05D007749 1.7e-152 543.5 475 60.0
CSS0019701 Camellia sinensis var. sinensis HOM05D006000 ORTHO05D007749 2.2e-152 543.1 474 59.5
TWI39G0152 Tripterygium wilfordii HOM05D006000 ORTHO05D007749 2.9e-152 542.7 479 58.5
Gorai.003G108600 Gossypium raimondii HOM05D006000 ORTHO05D007749 4.9e-152 542.0 471 59.9
CSS0006429 Camellia sinensis var. sinensis HOM05D006000 ORTHO05D007749 8.4e-152 541.2 474 58.9
FAN08G3509 Fragaria x ananassa HOM05D006000 ORTHO05D007749 2.7e-150 536.2 476 59.0
GSVIVG01007577001 Vitis vinifera HOM05D006000 ORTHO05D007749 3.5e-150 535.8 475 57.9
FvH4_5g06990 Fragaria vesca HOM05D006000 ORTHO05D007749 7.9e-150 534.6 470 60.0
Actinidia36773 Actinidia chinensis HOM05D006000 ORTHO05D007749 5.6e-148 528.5 474 57.4
Hund05620 Selenicereus undatus HOM05D006000 ORTHO05D007749 5.3e-146 521.9 476 58.0
THA.LOC104818202 Tarenaya hassleriana HOM05D006000 ORTHO05D007749 2.2e-144 516.5 476 56.5
Lj9C473G6 Lonicera japonica HOM05D006000 ORTHO05D007749 1.9e-143 513.5 477 56.8
Sp5g13670 Schrenkiella parvula HOM05D006000 ORTHO05D007749 1.9e-143 513.5 473 55.6
Thhalv10010185m.g Eutrema salsugineum HOM05D006000 ORTHO05D007749 1.6e-142 510.4 476 55.3
TAR622G0802 Trochodendron aralioides HOM05D006000 ORTHO05D007749 2.1e-142 510.0 479 54.1
AT3G48380 Arabidopsis thaliana HOM05D006000 ORTHO05D007749 3.5e-142 509.2 472 55.1
Psat5g139520 Pisum sativum HOM05D006000 ORTHO05D007749 3.5e-142 509.2 470 55.5
Carub.0005s1454 Capsella rubella HOM05D006000 ORTHO05D007749 1.3e-141 507.3 472 55.1
Ca_16102_v3 Cicer arietinum L. HOM05D006000 ORTHO05D007749 1.1e-140 504.2 474 56.8
Ca_30078_v3 Cicer arietinum L. HOM05D006000 ORTHO05D007749 1.1e-140 504.2 474 56.8
Medtr3g075250 Medicago truncatula HOM05D006000 ORTHO05D007749 1.5e-140 503.8 483 56.3
CARHR157150 Cardamine hirsuta HOM05D006000 ORTHO05D007749 2.5e-140 503.1 472 55.3
Ciclev10024180m.g Citrus clementina HOM05D006000 ORTHO05D007749 1.3e-139 500.7 474 57.6
AL5G27780 Arabidopsis lyrata HOM05D006000 ORTHO05D007749 3.7e-139 499.2 472 54.9
ClCG03G003330 Citrullus lanatus HOM05D006000 ORTHO05D007749 3.7e-139 499.2 480 55.0
BcaB01g00818 Brassica carinata HOM05D006000 ORTHO05D007749 6.9e-138 495.0 473 53.5
FAN04G1552 Fragaria x ananassa HOM05D006000 ORTHO05D007749 6.9e-138 495.0 476 57.1
Sed0018918 Sechium edule HOM05D006000 ORTHO05D007749 6.9e-138 495.0 480 54.4
BcaC07g39322 Brassica carinata HOM05D006000 ORTHO05D007749 2.0e-137 493.4 473 53.3
PSO782G4995 Papaver somniferum HOM05D006000 ORTHO05D007749 1.0e-136 491.1 475 51.4
Aa31LG4G16970 Aethionema arabicum HOM05D006000 ORTHO05D007749 1.7e-136 490.3 472 54.0
C08p23370 Brassica napus HOM05D006000 ORTHO05D007749 5.0e-136 488.8 474 53.2
BolC8t49966H Brassica oleracea HOM05D006000 ORTHO05D007749 5.0e-136 488.8 474 53.2
Dinv11120 Davidia involucrata HOM05D006000 ORTHO05D007749 6.5e-136 488.4 420 60.5
AUR62001257 Chenopodium quinoa HOM05D006000 ORTHO05D007749 1.9e-135 486.9 473 54.5
Eucgr.B00167 Eucalyptus grandis HOM05D006000 ORTHO05D007749 3.2e-135 486.1 474 53.8
Phvul.009G170100 Phaseolus vulgaris HOM05D006000 ORTHO05D007749 3.2e-135 486.1 453 55.8
Thecc.03G120400 Theobroma cacao HOM05D006000 ORTHO05D007749 4.2e-135 485.7 474 56.1
A06p19300 Brassica napus HOM05D006000 ORTHO05D007749 5.5e-135 485.3 475 53.1
BraA06t25013Z Brassica rapa HOM05D006000 ORTHO05D007749 1.6e-134 483.8 475 53.5
CsaV3_1G009140 Cucumis sativus L. HOM05D006000 ORTHO05D007749 2.1e-134 483.4 476 55.3
EL10Ac7g18048 Beta vulgaris HOM05D006000 ORTHO05D007749 3.5e-134 482.6 473 55.6
Glyma.06G174400 Glycine max HOM05D006000 ORTHO05D007749 1.0e-133 481.1 460 54.8
VMungo1309G2614 Vigna mungo HOM05D006000 ORTHO05D007749 1.3e-133 480.7 474 54.9
Nitab4.5_0001360g0160 Nicotiana tabacum HOM05D006000 ORTHO05D007749 1.8e-133 480.3 477 54.9
Glyma.04G191400 Glycine max HOM05D006000 ORTHO05D007749 2.3e-133 479.9 477 53.0
Lsat_1_v5_gn_5_13060 Lactuca sativa HOM05D006000 ORTHO05D007749 3.9e-133 479.2 481 53.6
Nn4g22511 Nelumbo nucifera HOM05D006000 ORTHO05D007749 5.1e-133 478.8 471 52.4
vmacro16696 Vaccinium macrocarpon HOM05D006000 ORTHO05D007749 8.7e-133 478.0 476 54.8
Lalb_Chr11g0069771 Lupinus albus HOM05D006000 ORTHO05D007749 1.1e-132 477.6 468 55.1
Lj1g0007517 Lotus japonicus HOM05D006000 ORTHO05D007749 5.7e-132 475.3 475 53.5
Nitab4.5_0006717g0030 Nicotiana tabacum HOM05D006000 ORTHO05D007749 2.8e-131 473.0 476 55.0
CiPaw.12G034200 Carya illinoinensis HOM05D006000 ORTHO05D007749 6.3e-131 471.9 361 65.7
arahy.Tifrunner.gnm1.ann1.9XY5HM Arachis hypogaea HOM05D006000 ORTHO05D007749 1.4e-130 470.7 458 55.2
arahy.Tifrunner.gnm1.ann1.1AQ6ST Arachis hypogaea HOM05D006000 ORTHO05D007749 1.8e-130 470.3 458 55.2
PGSC0003DMG400015231 Solanum tuberosum HOM05D006000 ORTHO05D007749 2.4e-130 469.9 476 53.4
Oeu053502.2 Olea europaea HOM05D006000 ORTHO05D007749 3.1e-130 469.5 478 52.5
PGR083G2177 Punica granatum HOM05D006000 ORTHO05D007749 2.6e-129 466.5 480 51.7
Solyc03g111660.3 Solanum lycopersicum HOM05D006000 ORTHO05D007749 3.4e-129 466.1 477 53.7
Sopen03g030780 Solanum pennellii HOM05D006000 ORTHO05D007749 4.5e-129 465.7 476 54.0
MELO3C002321.2 Cucumis melo HOM05D006000 ORTHO05D007749 1.0e-128 464.5 486 53.3
HanXRQChr05g0156141 Helianthus annuus HOM05D006000 ORTHO05D007749 6.5e-128 461.8 472 52.1
CAN.G472.50 Capsicum annuum HOM05D006000 ORTHO05D007749 1.6e-126 457.2 476 53.6
ECA246G4586 Erigeron canadensis HOM05D006000 ORTHO05D007749 1.6e-126 457.2 479 51.1
Migut.D02037 Erythranthe guttata HOM05D006000 ORTHO05D007749 2.0e-124 450.3 479 51.4
Peaxi162Scf00089g00935 Petunia axillaris HOM05D006000 ORTHO05D007749 4.3e-124 449.1 476 52.7
Rhsim12G0171000 Rhododendron simsii HOM05D006000 ORTHO05D007749 4.3e-124 449.1 438 54.3
Cc04_g10700 Coffea canephora HOM05D006000 ORTHO05D007749 2.8e-123 446.4 480 50.2
Sc10g0010320 Simmondsia chinensis HOM05D006000 ORTHO05D007749 2.0e-121 440.3 478 50.4
MSTRG.4336 Avicennia marina HOM05D006000 ORTHO05D007749 2.2e-120 436.8 476 50.4
TPR.G38611 Trifolium pratense HOM05D006000 ORTHO05D007749 1.1e-114 417.9 497 48.3
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 2.1e-110 403.7 482 46.5
Ah.15g095430 Amaranthus hybridus HOM05D006000 ORTHO05D007749 1.4e-109 401.0 476 46.6
CDE09G0792 Ceratophyllum demersum HOM05D006000 ORTHO05D007749 1.4e-109 401.0 482 45.9
ATR0824G112 Amborella trichopoda HOM05D006000 ORTHO05D007749 5.2e-109 399.1 474 46.0
SalBow8G1380 Salvia bowleyana HOM05D006000 ORTHO05D007749 6.5e-104 382.1 505 45.9
HPP92_027096 Vanilla planifolia HOM05D006000 ORTHO05D007749 1.1e-103 381.3 473 42.3
Cpa.g.sc4.40 Carica papaya HOM05D006000 ORTHO05D007749 1.9e-95 354.0 365 52.6
unitig_21.g20436 Utricularia gibba HOM05D006000 ORTHO05D007749 2.5e-95 353.6 485 43.3
Os12g0285500 Oryza sativa ssp. japonica HOM05D006000 ORTHO05D007749 8.8e-93 345.1 471 39.9
Actinidia08849 Actinidia chinensis HOM05D006000 ORTHO05D007749 5.7e-92 342.4 473 43.6
DCAR_016429 Daucus carota HOM05D006000 ORTHO05D007749 1.3e-88 331.3 423 43.3
Dinv12561 Davidia involucrata HOM05D006000 ORTHO05D007749 1.6e-78 297.7 305 53.1
HPP92_021434 Vanilla planifolia HOM05D006000 ORTHO05D007749 2.6e-76 290.4 417 38.6
Zm00001eb133430 Zea mays HOM05D006000 ORTHO05D007749 1.5e-68 264.6 508 34.3
FvH4_5g06921 Fragaria vesca HOM05D006000 ORTHO05D007749 7.1e-66 255.8 277 48.7
Mapoly0004s0201 Marchantia polymorpha HOM05D006000 ORTHO05D007749 1.7e-56 224.6 473 30.7
FvH4_5g06950 Fragaria vesca HOM05D006000 ORTHO05D007749 1.1e-50 205.3 219 48.4
Pp3c6_16550 Physcomitrium patens HOM05D006000 ORTHO05D007749 1.3e-48 198.4 463 32.6
arahy.Tifrunner.gnm1.ann1.HVEI7F Arachis hypogaea HOM05D006000 ORTHO05D007749 3.4e-44 183.7 165 57.0
SMO201G0062 Selaginella moellendorffii HOM05D006000 ORTHO05D007749 2.4e-42 177.6 466 29.6
CBR_g41805 Chara braunii HOM05D006000 ORTHO05D007749 1.5e-31 141.7 211 37.9
TAR622G0554 Trochodendron aralioides HOM05D006000 ORTHO05D007749 1.6e-25 121.7 155 45.8
arahy.Tifrunner.gnm1.ann1.1X7LEL Arachis hypogaea HOM05D000074 ORTHO05D007749 7.9e-25 119.4 349 28.9
FvH4_5g06922 Fragaria vesca HOM05D006000 ORTHO05D007749 3.9e-24 117.1 84 65.5
DCAR_016428 Daucus carota HOM05D006000 ORTHO05D007749 6.7e-24 116.3 75 76.0
AagrBONN_evm.TU.Sc2ySwM_362.2604 Anthoceros agrestis HOM05D006000 ORTHO05D007749 1.6e-22 111.7 474 26.2
Cre03.g197900 Chlamydomonas reinhardtii HOM05D006000 ORTHO05D007749 2.9e-19 100.9 163 38.7
Lsat_1_v5_gn_5_95420 Lactuca sativa HOM05D004927 ORTHO05D005798 7.4e-07 59.7 82 39.0
arahy.Tifrunner.gnm1.ann1.XFG60B Arachis hypogaea HOM05D006000 ORTHO05D007749 8.2e-06 56.2 113 38.1


User provided reference genes

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