Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 4.1e-282 974.2 528 100.0
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 6.7e-224 780.8 530 82.3
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.1e-178 630.6 526 68.6
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 1.8e-173 613.2 526 67.7
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 6.6e-171 604.7 524 66.4
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 6.1e-169 598.2 519 67.8
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 4.0e-168 595.5 525 65.9
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.3e-166 590.5 523 66.5
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 2.4e-165 586.3 523 66.2
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 5.9e-164 581.6 536 67.0
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 7.3e-162 574.7 533 63.6
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 3.6e-161 572.4 545 63.7
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 6.4e-158 561.6 557 60.9
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 2.7e-156 556.2 532 61.7
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 6.0e-156 555.1 514 65.6
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 5.0e-155 552.0 535 62.6
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 1.5e-154 550.4 611 56.3
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.5e-154 550.4 538 62.3
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 1.9e-154 550.1 542 63.8
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 3.3e-154 549.3 541 61.6
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 2.1e-153 546.6 541 61.9
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.6e-153 545.8 540 61.5
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 4.7e-153 545.4 533 62.9
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 5.2e-152 542.0 531 62.9
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 7.5e-151 538.1 535 60.4
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 1.7e-150 537.0 534 61.0
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.4e-149 533.9 533 60.8
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 7.0e-149 531.6 531 59.7
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 9.2e-149 531.2 534 60.5
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.1e-148 530.0 534 60.7
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.7e-148 529.6 534 59.6
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 7.3e-146 521.5 514 59.9
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 1.2e-145 520.8 486 62.8
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 4.1e-141 505.8 537 57.2
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 2.1e-140 503.4 489 62.0
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 2.7e-140 503.1 497 62.8
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 1.0e-139 501.1 533 56.8
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 5.1e-139 498.8 555 56.8
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 8.6e-139 498.0 565 56.3
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 1.9e-138 496.9 498 60.2
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 4.7e-137 492.3 536 58.2
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 3.4e-135 486.1 534 56.9
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 1.9e-133 480.3 530 56.0
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 5.4e-133 478.8 527 55.8
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 9.2e-133 478.0 530 55.7
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 4.6e-132 475.7 534 55.6
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.7e-131 473.8 524 55.7
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 2.5e-130 469.9 522 56.5
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 7.3e-130 468.4 524 57.4
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 9.6e-130 468.0 514 55.8
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 1.6e-129 467.2 525 53.0
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 2.1e-129 466.8 527 56.9
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 8.1e-129 464.9 531 56.7
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 1.2e-127 461.1 519 56.5
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 4.4e-127 459.1 533 52.7
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.7e-126 457.2 517 52.2
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 2.2e-126 456.8 525 55.4
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 8.4e-126 454.9 529 55.2
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 3.2e-125 453.0 512 52.9
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 9.3e-125 451.4 525 54.1
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 1.6e-124 450.7 539 54.5
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 2.7e-124 449.9 538 55.2
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 1.3e-123 447.6 527 53.7
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.7e-123 447.2 537 51.8
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 1.7e-123 447.2 522 52.9
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 3.9e-123 446.0 539 53.1
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 5.1e-123 445.7 544 53.1
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 1.5e-122 444.1 507 55.0
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 3.3e-122 443.0 533 55.3
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.1e-120 438.0 528 55.5
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 1.4e-120 437.6 538 52.4
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 3.1e-120 436.4 538 54.6
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 5.3e-120 435.6 531 54.8
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 9.0e-120 434.9 533 50.1
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 3.4e-119 433.0 552 50.4
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 5.8e-119 432.2 541 53.8
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 9.9e-119 431.4 528 50.9
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 8.4e-118 428.3 502 53.6
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 8.4e-118 428.3 421 64.1
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 1.9e-117 427.2 533 50.5
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 1.6e-116 424.1 534 51.5
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 4.6e-116 422.5 510 51.4
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 5.1e-115 419.1 538 49.3
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 8.7e-115 418.3 528 48.9
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 1.1e-114 417.9 537 49.7
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.1e-114 417.9 506 52.2
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 7.4e-114 415.2 506 50.8
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 9.6e-114 414.8 532 51.7
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 1.4e-112 411.0 528 53.2
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 4.0e-112 409.5 540 53.3
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 4.0e-112 409.5 544 49.3
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 6.9e-112 408.7 539 50.6
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 6.9e-112 408.7 516 51.7
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 3.4e-111 406.4 529 52.4
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 7.6e-111 405.2 539 48.4
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 2.2e-110 403.7 529 52.2
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 3.8e-110 402.9 542 48.7
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 4.9e-110 402.5 506 49.6
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 6.4e-110 402.1 546 47.8
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 1.6e-108 397.5 504 50.0
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 2.1e-108 397.1 506 49.0
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 6.0e-108 395.6 560 47.9
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 1.0e-107 394.8 416 57.7
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 3.0e-107 393.3 552 47.1
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 3.0e-107 393.3 544 48.7
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 6.7e-107 392.1 552 46.9
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 6.7e-107 392.1 554 46.9
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 1.1e-106 391.3 525 47.6
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 9.6e-106 388.3 527 48.8
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 2.1e-105 387.1 540 46.1
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 2.8e-105 386.7 528 46.6
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 6.2e-105 385.6 535 45.8
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 8.2e-105 385.2 535 45.6
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 5.3e-104 382.5 528 46.6
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 7.6e-103 378.6 524 48.7
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 1.1e-101 374.8 546 49.3
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 1.9e-101 374.0 541 46.6
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 2.5e-98 363.6 514 45.9
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 3.3e-98 363.2 513 47.2
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 1.4e-93 347.8 474 50.0
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 1.2e-92 344.7 372 54.0
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.1e-92 344.0 529 43.1
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 6.1e-92 342.4 552 46.9
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 1.5e-90 337.8 373 57.6
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 1.0e-86 325.1 512 44.3
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 3.8e-86 323.2 376 57.7
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.6e-84 317.8 556 44.1
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 2.6e-79 300.4 523 43.6
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 5.5e-77 292.7 526 42.6
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 2.1e-76 290.8 455 45.3
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.5e-74 284.6 544 40.3
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 3.7e-73 280.0 397 50.1
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 5.9e-71 272.7 522 39.7
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 1.0e-70 271.9 449 42.3
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 2.7e-68 263.8 314 57.6
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 1.7e-65 254.6 566 37.3
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 2.8e-65 253.8 252 66.3
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 4.8e-65 253.1 280 52.5
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 1.8e-59 234.6 422 40.3
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 5.2e-59 233.0 399 39.6
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 6.3e-57 226.1 237 57.0
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 2.0e-55 221.1 333 45.6
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 4.7e-52 209.9 184 62.5
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.8e-51 208.0 402 38.8
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 2.3e-51 207.6 468 36.8
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 2.6e-50 204.1 479 36.7
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 7.0e-48 196.1 478 34.5
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 9.2e-48 195.7 409 35.7
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 2.7e-47 194.1 409 35.2
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 5.9e-47 193.0 411 35.3
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 7.3e-45 186.0 239 47.3
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 6.1e-44 183.0 551 33.8
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 2.1e-36 157.9 569 31.6
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 2.9e-33 147.5 194 49.5
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 8.3e-33 146.0 513 29.8
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 1.4e-32 145.2 247 41.7
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 4.1e-32 143.7 273 38.8
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 1.9e-29 134.8 279 41.9
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 2.8e-28 131.0 253 38.7
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 8.9e-27 125.9 248 38.7
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 3.4e-26 124.0 187 43.3
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 7.6e-26 122.9 148 49.3
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 1.2e-23 115.5 331 33.5
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 2.5e-21 107.8 142 45.1
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 7.3e-21 106.3 117 58.1
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 1.2e-20 105.5 204 47.1
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 1.1e-19 102.4 91 58.2
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 1.2e-18 99.0 128 50.0
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.3e-17 95.5 119 52.1
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 9.3e-16 89.4 138 38.4
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 3.1e-11 74.3 95 49.5
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.2e-09 68.2 96 43.8
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 4.9e-09 67.0 139 39.6
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 4.9e-09 67.0 53 58.5
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 1.2e-07 62.4 91 41.8
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 6.6e-06 56.6 64 46.9


User provided reference genes

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