Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G070700 Populus trichocarpa HOM05D003533 ORTHO05D004009 1.6e-26 122.5 83 100.0
Sabra15G0095000 Salix brachista HOM05D003533 ORTHO05D004009 1.4e-19 99.4 83 83.1
Sabra15G0095900 Salix brachista HOM05D003533 ORTHO05D004009 1.4e-19 99.4 83 83.1
Potri.012G075800 Populus trichocarpa HOM05D003533 ORTHO05D004009 7.2e-16 87.0 83 79.5
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 1.4e-14 82.8 85 54.1
Sabra12G0053900 Salix brachista HOM05D003533 ORTHO05D004009 1.4e-14 82.8 83 75.9
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 4.0e-14 81.3 86 53.5
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 4.8e-12 74.3 83 48.2
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 6.3e-12 73.9 85 51.8
PGR083G0433 Punica granatum HOM05D003533 ORTHO05D004009 8.3e-12 73.6 88 60.2
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 1.1e-11 73.2 81 51.9
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 1.4e-11 72.8 80 48.8
Cfa019066 Carpinus fangiana HOM05D003533 ORTHO05D004009 1.8e-11 72.4 83 68.7
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.4e-11 72.0 72 48.6
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 3.1e-11 71.6 88 46.6
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 5.4e-11 70.9 83 45.8
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 7.0e-11 70.5 80 51.2
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 9.1e-11 70.1 83 43.4
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 1.6e-10 69.3 83 44.6
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 1.6e-10 69.3 83 44.6
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 3.5e-10 68.2 84 48.8
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 4.5e-10 67.8 84 46.4
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 7.7e-10 67.0 85 44.7
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 7.7e-10 67.0 80 45.0
Prupe.1G261100 Prunus persica HOM05D003533 ORTHO05D004009 1.3e-09 66.2 83 55.4
Eucgr.C02738 Eucalyptus grandis HOM05D003533 ORTHO05D004009 3.8e-09 64.7 86 61.6
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 6.5e-09 63.9 83 42.2
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 8.5e-09 63.5 81 40.7
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 8.5e-09 63.5 86 43.0
MD16G1084900 Malus domestica HOM05D003533 ORTHO05D004009 1.9e-08 62.4 85 42.4
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 1.9e-08 62.4 79 43.0
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.5e-08 62.0 84 46.4
Gohir.D12G053600 Gossypium hirsutum HOM05D019532 ORTHO05D025681 3.2e-08 61.6 88 68.2
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 3.2e-08 61.6 80 40.0
Ciclev10023101m.g Citrus clementina HOM05D003533 ORTHO05D004009 4.2e-08 61.2 83 62.7
Haze_07436 Corylus avellana HOM05D003533 ORTHO05D004009 4.2e-08 61.2 83 72.3
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 4.2e-08 61.2 81 42.0
CiPaw.11G032200 Carya illinoinensis HOM05D003533 ORTHO05D004009 5.5e-08 60.8 91 41.8
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 7.2e-08 60.5 85 41.2
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 7.2e-08 60.5 85 41.2
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 7.2e-08 60.5 81 42.0
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 9.4e-08 60.1 85 40.0
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.2e-07 59.7 84 41.7
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 1.2e-07 59.7 83 42.2
Sed0014302 Sechium edule HOM05D003533 ORTHO05D004009 1.6e-07 59.3 89 64.0
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.1e-07 58.9 84 45.2
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.1e-07 58.9 84 44.0
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 2.7e-07 58.5 84 45.2
Gohir.D05G321600 Gossypium hirsutum HOM05D003533 ORTHO05D004009 2.7e-07 58.5 81 39.5
Gorai.009G345100 Gossypium raimondii HOM05D003533 ORTHO05D004009 2.7e-07 58.5 81 39.5
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 4.7e-07 57.8 84 40.5
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 4.7e-07 57.8 89 41.6
Gohir.A05G319400 Gossypium hirsutum HOM05D003533 ORTHO05D004009 6.1e-07 57.4 81 39.5
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 6.1e-07 57.4 83 39.8
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 8.0e-07 57.0 84 44.0
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.4e-06 56.2 84 40.5
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.4e-06 56.2 84 40.5
Gorai.008G056900 Gossypium raimondii HOM05D019532 ORTHO05D025681 1.4e-06 56.2 85 67.1
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 1.4e-06 56.2 83 43.4
CsaV3_1G001820 Cucumis sativus L. HOM05D003533 ORTHO05D004009 1.8e-06 55.8 84 45.2
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 1.8e-06 55.8 74 41.9
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 2.3e-06 55.5 76 40.8
Lalb_Chr12g0201351 Lupinus albus HOM05D003533 ORTHO05D004009 3.0e-06 55.1 82 37.8
Sed0002579 Sechium edule HOM05D003533 ORTHO05D004009 3.0e-06 55.1 83 37.3
Cfa009093 Carpinus fangiana HOM05D003533 ORTHO05D004009 6.8e-06 53.9 92 47.8
Cc11_g14110 Coffea canephora HOM05D003533 ORTHO05D004009 6.8e-06 53.9 81 38.3
Eucgr.K02881 Eucalyptus grandis HOM05D003533 ORTHO05D004009 6.8e-06 53.9 86 38.4
Lalb_Chr12g0201361 Lupinus albus HOM05D003533 ORTHO05D004009 6.8e-06 53.9 82 37.8
Nitab4.5_0002059g0090 Nicotiana tabacum HOM05D003533 ORTHO05D004009 6.8e-06 53.9 93 38.7
Peaxi162Scf01141g00003 Petunia axillaris HOM05D003533 ORTHO05D004009 6.8e-06 53.9 91 38.5
ClCG06G016690 Citrullus lanatus HOM05D003533 ORTHO05D004009 8.8e-06 53.5 49 59.2


User provided reference genes

Program Settings