Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.4e-221 772.7 398 100.0
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 9.2e-202 706.8 398 91.2
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 2.2e-163 579.3 396 75.0
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 8.8e-144 514.2 392 66.1
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.5e-143 513.5 386 68.4
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 7.0e-141 504.6 389 65.3
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.2e-140 503.8 389 65.0
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 1.5e-140 503.4 389 65.8
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 5.9e-140 501.5 391 65.2
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 6.5e-139 498.0 391 64.7
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 1.5e-138 496.9 391 64.7
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 5.5e-138 495.0 391 64.5
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 1.0e-136 490.7 391 62.1
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.4e-136 490.3 396 63.1
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 2.3e-136 489.6 391 62.1
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 5.2e-136 488.4 391 62.9
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 5.2e-136 488.4 394 62.9
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.1e-135 487.3 396 63.6
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 1.5e-135 486.9 392 62.5
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 7.4e-135 484.6 391 62.4
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 1.3e-134 483.8 391 62.7
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 8.2e-134 481.1 391 62.7
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 1.8e-133 479.9 378 64.8
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 4.1e-133 478.8 389 60.7
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 4.1e-133 478.8 395 61.5
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 5.3e-133 478.4 394 61.9
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.2e-131 473.0 394 60.7
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 6.5e-131 471.5 353 67.1
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 4.2e-130 468.8 392 61.2
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.2e-129 467.2 392 59.4
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 1.6e-129 466.8 394 61.7
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 6.1e-129 464.9 392 59.2
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 8.0e-129 464.5 394 60.9
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 8.0e-129 464.5 392 59.7
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 8.0e-129 464.5 392 59.2
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 4.0e-128 462.2 394 60.4
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 5.2e-128 461.8 392 59.4
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 5.7e-127 458.4 391 58.6
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 9.7e-127 457.6 394 57.9
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.7e-126 456.8 394 58.4
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 1.4e-125 453.8 394 60.4
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 1.4e-125 453.8 394 58.1
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 5.3e-125 451.8 414 58.0
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 1.6e-124 450.3 392 60.5
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 2.0e-124 449.9 389 59.9
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 9.4e-122 441.0 373 59.5
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 2.7e-121 439.5 398 59.3
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 8.0e-121 438.0 392 55.9
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 1.0e-120 437.6 389 57.1
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 6.8e-120 434.9 389 57.3
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 8.8e-120 434.5 393 56.5
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 8.8e-120 434.5 394 56.3
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.5e-119 433.7 389 58.4
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 1.5e-119 433.7 393 53.2
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 2.0e-119 433.3 395 56.7
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 3.7e-118 429.1 393 56.5
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.4e-117 427.2 389 57.1
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 1.4e-117 427.2 417 55.2
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 1.8e-117 426.8 395 52.7
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 9.1e-117 424.5 395 54.9
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 1.6e-116 423.7 390 53.8
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 3.5e-116 422.5 386 55.7
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 4.5e-116 422.2 416 53.4
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 5.9e-116 421.8 394 53.8
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.0e-115 421.0 416 53.4
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.0e-115 421.0 416 53.4
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 1.3e-115 420.6 394 53.8
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 1.7e-115 420.2 395 53.4
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 1.7e-115 420.2 391 54.5
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.3e-115 419.9 388 56.4
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 6.6e-115 418.3 394 53.6
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.2e-113 414.1 402 52.7
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 1.6e-113 413.7 393 51.1
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 2.6e-111 406.4 418 53.1
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 3.7e-110 402.5 395 53.7
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 4.9e-110 402.1 394 52.5
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 2.3e-107 393.3 397 52.4
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 3.9e-107 392.5 393 50.6
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 1.1e-106 391.0 393 51.7
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 3.3e-106 389.4 393 50.4
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 4.4e-103 379.0 403 49.1
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.2e-102 376.7 393 49.6
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 2.9e-102 376.3 399 50.4
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 1.1e-101 374.4 389 49.4
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 9.2e-101 371.3 393 49.1
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.2e-100 370.9 393 48.6
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 3.0e-99 366.3 394 49.2
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.5e-98 364.0 393 48.1
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 3.6e-97 359.4 394 48.5
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 3.6e-97 359.4 396 49.0
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 6.8e-96 355.1 397 49.9
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 2.9e-94 349.7 397 47.1
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 8.3e-94 348.2 307 59.9
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 3.2e-93 346.3 393 47.3
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 4.1e-93 345.9 397 46.1
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 1.6e-92 344.0 400 46.8
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 1.6e-92 344.0 399 45.1
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 2.1e-92 343.6 402 46.3
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 2.7e-92 343.2 402 46.3
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 1.1e-90 337.8 390 47.2
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 2.5e-90 336.7 396 45.2
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.6e-89 334.0 392 46.2
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 1.4e-88 330.9 310 57.1
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.5e-87 327.4 392 44.9
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 4.4e-87 325.9 268 60.8
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 1.1e-85 321.2 265 60.4
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 1.1e-85 321.2 396 45.2
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 1.1e-85 321.2 397 42.8
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 1.6e-81 307.4 388 42.3
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 1.6e-73 280.8 333 42.9
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 3.5e-68 263.1 181 72.4
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 2.3e-67 260.4 295 47.5
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 5.8e-63 245.7 421 38.0
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 5.3e-40 169.5 311 39.5
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 2.6e-39 167.2 366 31.4
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 2.9e-38 163.7 374 29.7
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 6.5e-38 162.5 257 35.0
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 6.1e-36 156.0 246 39.8
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 1.5e-34 151.4 342 31.0
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 6.9e-32 142.5 389 30.6
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.1e-29 135.2 428 29.9
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 9.4e-29 132.1 184 45.7
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.0e-27 128.6 180 45.0
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.8e-24 117.9 367 25.9
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.8e-24 117.9 367 25.9
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 2.4e-24 117.5 351 24.8
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 4.0e-19 100.1 292 26.4
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 5.3e-16 89.7 298 27.2
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 7.0e-16 89.4 119 42.0
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 1.7e-09 68.2 278 25.5
COL.COLO4_31086 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.1e-08 65.5 62 56.5


User provided reference genes

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