Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G062300 Populus trichocarpa HOM05D007106 ORTHO05D007770 4.3e-49 197.6 94 100.0
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 7.4e-17 90.5 95 52.6
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 4.1e-15 84.7 88 50.0
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 4.1e-15 84.7 93 50.5
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 9.0e-15 83.6 93 49.5
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 1.2e-14 83.2 87 49.4
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 2.0e-14 82.4 97 49.5
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 4.5e-14 81.3 93 48.4
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 7.7e-14 80.5 90 46.7
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 1.0e-13 80.1 97 51.5
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 2.9e-13 78.6 100 52.0
TWI15G1028 Tripterygium wilfordii HOM05D007106 ORTHO05D007770 5.5e-12 74.3 100 45.0
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 7.2e-12 73.9 102 51.0
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 9.4e-12 73.6 86 48.8
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 9.4e-12 73.6 96 45.8
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 9.4e-12 73.6 96 45.8
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 9.4e-12 73.6 86 48.8
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 9.4e-12 73.6 97 46.4
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.6e-11 72.8 86 48.8
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 6.1e-11 70.9 93 47.3
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 6.1e-11 70.9 93 47.3
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 7.9e-11 70.5 96 44.8
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.4e-10 69.7 97 43.3
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 1.4e-10 69.7 91 47.3
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 2.3e-10 68.9 99 42.4
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 3.0e-10 68.6 95 47.4
THA.LOC104821419 Tarenaya hassleriana HOM05D012999 ORTHO05D007770 3.9e-10 68.2 97 49.5
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 5.1e-10 67.8 100 48.0
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 5.1e-10 67.8 90 45.6
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 8.8e-10 67.0 98 41.8
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 1.1e-09 66.6 98 44.9
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.0e-09 65.9 96 43.8
Atru.chr9.252 Acer truncatum HOM05D007106 ORTHO05D007770 2.5e-09 65.5 94 43.6
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 4.3e-09 64.7 97 41.2
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 4.3e-09 64.7 97 41.2
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 7.4e-09 63.9 96 43.8
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 7.4e-09 63.9 89 48.3
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 9.7e-09 63.5 97 44.3
Nitab4.5_0001128g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.3e-08 63.2 99 40.4
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 1.7e-08 62.8 96 47.9
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 1.7e-08 62.8 90 44.4
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 1.7e-08 62.8 90 44.4
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 2.8e-08 62.0 91 42.9
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 2.8e-08 62.0 86 44.2
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 4.8e-08 61.2 98 42.9
Thhalv10010864m.g Eutrema salsugineum HOM05D012999 ORTHO05D007770 6.3e-08 60.8 91 46.2
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 6.3e-08 60.8 94 41.5
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 8.2e-08 60.5 95 43.2
BcaB01g00910 Brassica carinata HOM05D012999 ORTHO05D007770 5.3e-07 57.8 66 53.0
CARHR156150 Cardamine hirsuta HOM05D012999 ORTHO05D007770 5.3e-07 57.8 90 43.3
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 5.3e-07 57.8 96 41.7
Ah.11g048350 Amaranthus hybridus HOM05D007106 ORTHO05D007770 6.9e-07 57.4 93 36.6
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 9.1e-07 57.0 33 75.8
THA.LOC104812541 Tarenaya hassleriana HOM05D007106 ORTHO05D007770 9.1e-07 57.0 32 78.1
BcaC01g01809 Brassica carinata HOM05D012999 ORTHO05D007770 1.5e-06 56.2 90 43.3
A06p20110 Brassica napus HOM05D012999 ORTHO05D007770 1.5e-06 56.2 90 43.3
C03p71690 Brassica napus HOM05D012999 ORTHO05D007770 1.5e-06 56.2 90 43.3
BolC3t19461H Brassica oleracea HOM05D012999 ORTHO05D007770 1.5e-06 56.2 90 43.3
BraA06t25097Z Brassica rapa HOM05D012999 ORTHO05D007770 1.5e-06 56.2 90 43.3
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 2.0e-06 55.8 87 41.4
Sp5g14370 Schrenkiella parvula HOM05D012999 ORTHO05D007770 2.0e-06 55.8 90 44.4
EL10Ac5g11028 Beta vulgaris HOM05D007106 ORTHO05D007770 2.6e-06 55.5 98 41.8
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 3.4e-06 55.1 86 45.3
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 3.4e-06 55.1 89 37.1
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 3.4e-06 55.1 96 42.7
Eucgr.B00514 Eucalyptus grandis HOM05D007106 ORTHO05D007770 4.5e-06 54.7 84 40.5
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 4.5e-06 54.7 99 39.4
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 7.7e-06 53.9 97 42.3
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 7.7e-06 53.9 97 39.2


User provided reference genes

Program Settings