Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.5e-53 212.6 108 100.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.4e-48 196.1 108 91.7
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 7.9e-47 190.3 108 88.0
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 8.7e-46 186.8 108 86.1
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.1e-45 186.4 108 86.1
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.1e-45 186.4 108 86.1
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.1e-45 186.4 108 86.1
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 1.3e-44 183.0 108 84.3
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.1e-44 182.2 108 85.2
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.1e-44 182.2 108 82.4
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 3.7e-44 181.4 108 86.1
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 3.7e-44 181.4 107 83.2
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 4.8e-44 181.0 109 84.4
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.8e-43 179.1 108 79.6
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 4.0e-43 177.9 109 81.7
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 1.5e-42 176.0 101 85.1
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.0e-42 175.6 101 84.2
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 3.4e-42 174.9 108 78.7
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 1.0e-41 173.3 104 83.7
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 1.0e-41 173.3 108 80.6
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 2.2e-41 172.2 101 83.2
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.9e-41 171.8 108 77.8
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.9e-41 171.8 108 79.6
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 2.9e-41 171.8 108 76.9
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 2.9e-41 171.8 108 76.9
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 2.9e-41 171.8 110 77.3
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 3.8e-41 171.4 108 76.9
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 6.5e-41 170.6 104 82.7
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 8.4e-41 170.2 108 76.9
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.1e-40 169.9 108 77.8
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 1.1e-40 169.9 102 80.4
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.4e-40 169.5 108 77.8
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 1.9e-40 169.1 108 75.9
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.9e-40 169.1 101 83.2
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 2.5e-40 168.7 108 75.9
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 3.2e-40 168.3 108 79.6
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 9.3e-40 166.8 108 75.9
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 9.3e-40 166.8 105 77.1
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 9.3e-40 166.8 105 77.1
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 9.3e-40 166.8 105 77.1
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.2e-39 166.4 108 75.9
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.2e-39 166.4 106 79.2
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.1e-39 165.6 105 77.1
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 2.1e-39 165.6 108 76.9
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 2.1e-39 165.6 101 76.2
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.5e-39 164.9 103 77.7
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 6.0e-39 164.1 106 77.4
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 7.9e-39 163.7 101 79.2
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 1.0e-38 163.3 101 74.3
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.3e-38 162.9 99 75.8
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.3e-38 162.9 101 74.3
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.8e-38 162.5 108 74.1
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 2.3e-38 162.2 99 74.7
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 3.0e-38 161.8 98 79.6
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 3.0e-38 161.8 101 74.3
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 3.0e-38 161.8 99 76.8
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 5.1e-38 161.0 108 74.1
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 5.1e-38 161.0 98 78.6
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 6.7e-38 160.6 99 77.8
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 8.7e-38 160.2 98 78.6
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.1e-37 159.8 99 74.7
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.1e-37 159.8 108 73.1
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 1.5e-37 159.5 108 72.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 3.3e-37 158.3 101 72.3
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 5.7e-37 157.5 99 75.8
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 5.7e-37 157.5 101 72.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 5.7e-37 157.5 101 72.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.6e-36 156.0 153 58.8
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 2.8e-36 155.2 136 63.2
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 6.3e-36 154.1 104 69.2
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.4e-35 152.9 106 71.7
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 3.1e-35 151.8 98 69.4
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 9.0e-35 150.2 92 77.2
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.6e-34 148.7 92 76.1
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 5.9e-34 147.5 87 81.6
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 5.9e-34 147.5 99 73.7
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 5.9e-34 147.5 99 73.7
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.9e-34 147.5 93 74.2
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 7.6e-34 147.1 92 78.3
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.3e-33 146.4 96 72.9
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 1.7e-33 146.0 88 85.2
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 2.9e-33 145.2 99 73.7
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 3.8e-33 144.8 92 76.1
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 6.5e-33 144.1 92 76.1
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.9e-32 142.5 94 77.7
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.9e-32 142.5 95 73.7
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.2e-32 141.7 92 73.9
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.2e-32 141.7 92 73.9
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 4.2e-32 141.4 98 71.4
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 2.1e-31 139.0 110 64.5
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 2.1e-31 139.0 92 71.7
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 6.1e-31 137.5 95 69.5
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 6.1e-31 137.5 86 84.9
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 3.9e-30 134.8 88 78.4
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 9.7e-29 130.2 88 79.5
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 3.7e-28 128.3 80 75.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.4e-27 126.3 79 75.9
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.2e-26 123.2 89 66.3
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.0e-26 122.5 90 64.4
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 2.6e-26 122.1 81 71.6
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 3.4e-26 121.7 100 58.0
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.2e-25 119.0 102 61.8
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.1e-23 110.9 81 71.6
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.3e-22 109.0 92 57.6
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 3.0e-22 108.6 77 74.0
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 1.1e-21 106.7 92 55.4
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 5.7e-21 104.4 73 64.4
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 9.7e-21 103.6 58 81.0
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 3.1e-19 98.6 56 83.9
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 6.9e-19 97.4 55 80.0
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 7.7e-18 94.0 74 60.8
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.7e-17 92.8 70 65.7
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.1e-15 85.9 53 81.1
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.1e-13 80.1 52 76.9
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 7.2e-08 60.8 53 54.7
MCO16G157 Micromonas commoda HOM05D006748 ORTHO05D008553 7.2e-08 60.8 88 31.8
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 4.7e-07 58.2 46 58.7


User provided reference genes

Program Settings