Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 1.3e-203 713.0 399 100.0
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 4.5e-164 581.6 379 85.5
Manes.14G084000 Manihot esculenta HOM05D006409 ORTHO05D008250 4.1e-125 452.2 397 68.0
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 7.2e-122 441.4 397 63.0
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 2.3e-120 436.4 403 61.3
QL10p018676 Quercus lobata HOM05D006409 ORTHO05D008250 3.4e-119 432.6 399 64.7
Duzib084G0027 Durio zibethinus HOM05D006409 ORTHO05D008250 2.2e-118 429.9 400 63.2
CiPaw.11G050000 Carya illinoinensis HOM05D006409 ORTHO05D008250 6.4e-118 428.3 399 64.9
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 2.5e-114 416.4 383 65.5
Prupe.5G201100 Prunus persica HOM05D006409 ORTHO05D008250 1.2e-111 407.5 402 63.4
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 6.4e-110 401.7 400 61.0
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 1.4e-109 400.6 382 60.7
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 3.0e-107 392.9 387 58.9
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 3.3e-106 389.4 404 59.9
Gohir.D12G183500 Gossypium hirsutum HOM05D006409 ORTHO05D008250 1.4e-104 384.0 400 59.8
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 3.1e-104 382.9 396 61.4
Rhsim08G0148500 Rhododendron simsii HOM05D006409 ORTHO05D008250 4.4e-103 379.0 382 63.1
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 1.7e-102 377.1 379 63.1
Gorai.008G196800 Gossypium raimondii HOM05D006409 ORTHO05D008250 1.2e-100 370.9 383 60.3
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 6.0e-100 368.6 401 56.9
TWI81G1094 Tripterygium wilfordii HOM05D006409 ORTHO05D008250 8.6e-99 364.8 384 60.7
Gohir.A12G180800 Gossypium hirsutum HOM05D006409 ORTHO05D008250 2.8e-97 359.8 400 57.5
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.8e-96 357.1 392 53.8
RcHm_v2.0_Chr7g0182601 Rosa chinensis HOM05D006409 ORTHO05D008250 3.1e-96 356.3 398 57.3
Cc00_g02320 Coffea canephora HOM05D006409 ORTHO05D008250 4.0e-96 355.9 387 58.9
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 5.2e-96 355.5 391 55.5
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 2.6e-95 353.2 388 57.2
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 2.9e-94 349.7 385 53.2
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 2.1e-92 343.6 383 56.1
Oeu014392.1 Olea europaea HOM05D006409 ORTHO05D006262 2.1e-92 343.6 410 52.9
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 1.3e-91 340.9 384 52.9
COL.COLO4_22753 Corchorus olitorius HOM05D006409 ORTHO05D008250 1.7e-91 340.5 397 55.2
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 4.3e-90 335.9 383 53.5
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 4.3e-90 335.9 384 54.2
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.6e-89 334.0 397 52.4
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 4.7e-89 332.4 383 53.0
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 8.1e-89 331.6 387 53.2
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 1.8e-88 330.5 384 53.9
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 2.4e-88 330.1 397 52.4
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 6.8e-88 328.6 385 55.3
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 8.9e-88 328.2 385 51.4
FAN08G0388 Fragaria x ananassa HOM05D006409 ORTHO05D008250 2.0e-87 327.0 396 56.6
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 5.8e-87 325.5 420 48.8
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 9.9e-87 324.7 385 55.3
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 1.3e-86 324.3 319 62.1
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 3.8e-86 322.8 386 55.4
Glyma.17G076800 Glycine max HOM05D006409 ORTHO05D008250 4.9e-86 322.4 387 51.7
CsaV3_1G005860 Cucumis sativus L. HOM05D006409 ORTHO05D008250 3.2e-85 319.7 393 53.7
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 3.2e-85 319.7 384 50.8
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 1.2e-84 317.8 385 55.1
FvH4_5g14277 Fragaria vesca HOM05D006409 ORTHO05D008250 1.6e-84 317.4 337 61.1
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 3.5e-84 316.2 393 54.2
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 4.6e-84 315.8 369 54.7
MELO3C002015.2 Cucumis melo HOM05D006409 ORTHO05D008250 4.6e-84 315.8 391 53.7
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 3.0e-83 313.2 378 55.0
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 6.6e-83 312.0 387 53.2
Atru.chr9.377 Acer truncatum HOM05D006409 ORTHO05D008250 4.3e-82 309.3 318 59.4
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 7.3e-82 308.5 386 51.6
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 9.6e-82 308.1 396 49.2
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 1.3e-81 307.8 382 49.5
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 1.6e-81 307.4 401 48.6
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 1.6e-81 307.4 385 51.2
DCAR_026015 Daucus carota HOM05D006409 ORTHO05D008250 3.6e-81 306.2 386 50.5
ClCG04G011930 Citrullus lanatus HOM05D006409 ORTHO05D008250 1.8e-80 303.9 393 52.2
Lj5A105T60 Lonicera japonica HOM05D006409 ORTHO05D008250 3.1e-80 303.1 331 56.5
PSO017G5610 Papaver somniferum HOM05D006409 ORTHO05D008250 3.1e-80 303.1 387 50.9
CANSAT80G0413 Cannabis sativa HOM05D006409 ORTHO05D008250 4.0e-80 302.8 356 56.5
TPR.G2042 Trifolium pratense HOM05D006409 ORTHO05D008250 4.0e-80 302.8 388 52.1
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 5.3e-80 302.4 386 50.5
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 5.3e-80 302.4 386 50.5
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 6.9e-80 302.0 384 53.6
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 9.0e-80 301.6 404 48.0
PSO478G4763 Papaver somniferum HOM05D006409 ORTHO05D008250 9.0e-80 301.6 398 50.0
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 2.0e-79 300.4 397 47.1
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 2.6e-79 300.1 385 53.2
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 3.4e-79 299.7 379 51.5
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 5.8e-79 298.9 384 53.1
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 7.6e-79 298.5 387 49.4
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 4.9e-78 295.8 355 51.0
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 1.9e-77 293.9 387 49.1
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 6.0e-76 288.9 339 52.2
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 7.9e-76 288.5 355 51.0
Actinidia04843 Actinidia chinensis HOM05D006409 ORTHO05D008250 8.7e-75 285.0 275 59.3
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 6.9e-72 275.4 417 45.8
ATR0064G033 Amborella trichopoda HOM05D006409 ORTHO05D008250 4.5e-71 272.7 403 44.4
Sc04g0003080 Simmondsia chinensis HOM05D006409 ORTHO05D008250 2.2e-70 270.4 394 49.2
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 6.4e-70 268.9 319 51.4
Sed0008489 Sechium edule HOM05D006409 ORTHO05D008250 1.2e-68 264.6 395 50.4
Psat4g048440 Pisum sativum HOM05D006409 ORTHO05D008250 2.7e-68 263.5 322 50.0
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 4.6e-68 262.7 344 48.3
HanXRQChr09g0270151 Helianthus annuus HOM05D006409 ORTHO05D008250 4.8e-65 252.7 397 44.1
AUR62021594 Chenopodium quinoa HOM05D006409 ORTHO05D008250 2.2e-62 243.8 356 49.7
ECA232G2526 Erigeron canadensis HOM05D006409 ORTHO05D008250 9.3e-61 238.4 397 46.3
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 2.7e-60 236.9 384 43.8
Migut.I00315 Erythranthe guttata HOM05D006409 ORTHO05D008250 6.0e-60 235.7 394 41.9
AUR62008498 Chenopodium quinoa HOM05D006409 ORTHO05D008250 5.1e-59 232.6 401 46.1
Ca_21789_v3 Cicer arietinum L. HOM05D006409 ORTHO05D008250 3.3e-58 229.9 327 46.8
CDE06G0998 Ceratophyllum demersum HOM05D006409 ORTHO05D008250 1.9e-53 214.2 350 41.4
Hund02605 Selenicereus undatus HOM05D006409 ORTHO05D008250 6.3e-49 199.1 397 41.1
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 2.0e-47 194.1 267 49.1
EL10Ac5g11100 Beta vulgaris HOM05D006409 ORTHO05D008250 1.0e-46 191.8 398 40.5
Duzib068G0538 Durio zibethinus HOM05D006409 ORTHO05D008250 4.2e-45 186.4 211 54.0
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 5.5e-45 186.0 284 46.1
Os07g0598700 Oryza sativa ssp. japonica HOM05D006409 ORTHO05D008250 2.1e-44 184.1 397 36.0
Zm00001eb108440 Zea mays HOM05D006409 ORTHO05D008250 5.1e-43 179.5 336 38.1
HanXRQChr16g0502261 Helianthus annuus HOM05D006409 ORTHO05D008250 5.7e-42 176.0 369 39.8
Ah.02g113920 Amaranthus hybridus HOM05D006409 ORTHO05D008250 1.7e-41 174.5 388 36.3
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 2.4e-40 170.6 288 45.5
Lsat_1_v5_gn_4_110201 Lactuca sativa HOM05D006409 ORTHO05D008250 6.7e-35 152.5 396 35.1
BcaC02g08699 Brassica carinata HOM05D006409 ORTHO05D008250 8.2e-33 145.6 235 44.7
SEGI_28191 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 4.2e-29 133.3 417 30.9
SEGI_37085 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 4.2e-29 133.3 417 30.9
SGA_v2.0_scaffold25G10967 Striga asiatica HOM05D006409 ORTHO05D008250 1.2e-23 115.2 353 32.6
C04p51590 Brassica napus HOM05D006409 ORTHO05D008250 5.7e-18 96.3 84 65.5
Actinidia12838 Actinidia chinensis HOM05D006409 ORTHO05D008250 4.8e-17 93.2 90 58.9
arahy.Tifrunner.gnm1.ann1.LPT8KM Arachis hypogaea HOM05D006409 ORTHO05D008250 2.5e-13 80.9 73 58.9
C04p51610 Brassica napus HOM05D006409 ORTHO05D008250 2.1e-12 77.8 141 38.3
Glyma.01G017150 Glycine max HOM05D006409 ORTHO05D008250 6.8e-11 72.8 91 47.3
C04p51600 Brassica napus HOM05D006409 ORTHO05D008250 2.0e-10 71.2 80 52.5
CARHR274940 Cardamine hirsuta HOM05D001456 ORTHO05D014991 3.5e-07 60.5 108 36.1
Thhalv10003670m.g Eutrema salsugineum HOM05D001456 ORTHO05D014991 1.7e-06 58.2 101 36.6


User provided reference genes

Program Settings