Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 1.3e-159 566.2 276 100.0
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 4.3e-97 358.6 293 68.9
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 2.1e-56 223.4 284 47.5
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 6.5e-53 211.8 286 47.9
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 2.3e-50 203.4 281 48.0
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 3.7e-48 196.1 281 45.6
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 9.0e-47 191.4 339 42.8
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 1.7e-45 187.2 279 47.0
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 1.9e-44 183.7 282 47.9
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 9.4e-44 181.4 282 46.1
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 4.6e-43 179.1 299 43.5
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 3.9e-42 176.0 295 43.7
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 1.4e-36 157.5 285 37.5
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 7.9e-35 151.8 294 38.4
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 3.0e-34 149.8 284 38.7
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 3.7e-32 142.9 251 41.4
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 6.3e-32 142.1 292 36.3
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 7.0e-31 138.7 271 37.3
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 3.5e-30 136.3 306 36.3
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 3.5e-30 136.3 306 36.3
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 2.9e-29 133.3 294 34.7
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 3.8e-29 132.9 295 34.6
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 2.5e-28 130.2 248 40.3
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 3.2e-28 129.8 314 36.3
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 1.4e-26 124.4 271 35.8
Thhalv10004801m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 1.8e-26 124.0 283 35.3
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 2.3e-26 123.6 280 33.9
Manes.06G080900 Manihot esculenta HOM05D007687 ORTHO05D009692 3.0e-26 123.2 230 39.6
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 3.9e-26 122.9 283 34.3
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 2.6e-25 120.2 240 38.8
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 7.4e-25 118.6 270 36.7
AL8G37500 Arabidopsis lyrata HOM05D007687 ORTHO05D009692 4.8e-24 115.9 283 35.0
AT5G60880 Arabidopsis thaliana HOM05D007687 ORTHO05D009692 1.8e-23 114.0 280 33.6
Gorai.006G268500 Gossypium raimondii HOM05D007687 ORTHO05D009692 1.8e-23 114.0 273 37.7
Cfa016835 Carpinus fangiana HOM05D007687 ORTHO05D009692 2.4e-23 113.6 202 38.1
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 2.4e-23 113.6 282 33.0
A03p46570 Brassica napus HOM05D007687 ORTHO05D009692 3.1e-23 113.2 286 33.9
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 5.3e-23 112.5 278 33.8
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 5.3e-23 112.5 278 33.8
BraA03t13781Z Brassica rapa HOM05D007687 ORTHO05D009692 7.0e-23 112.1 281 33.8
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 9.1e-23 111.7 278 33.5
Lj4g0013896 Lotus japonicus HOM05D007687 ORTHO05D009692 9.1e-23 111.7 272 34.2
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 2.6e-22 110.2 283 34.3
Medtr2g461550 Medicago truncatula HOM05D007687 ORTHO05D009692 1.7e-21 107.5 242 38.8
THA.LOC104801051 Tarenaya hassleriana HOM05D007687 ORTHO05D009692 8.5e-21 105.1 279 33.0
CARHR274560 Cardamine hirsuta HOM05D007687 ORTHO05D009692 1.1e-20 104.8 281 34.2
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 1.1e-20 104.8 286 33.2
BcaC06g33202 Brassica carinata HOM05D007687 ORTHO05D009692 3.2e-20 103.2 282 32.3
Thhalv10015806m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 3.2e-20 103.2 282 33.7
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 4.2e-20 102.8 280 33.2
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 2.3e-18 97.1 237 34.6
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 3.0e-18 96.7 292 31.5
VMungo1215G2041 Vigna mungo HOM05D007687 ORTHO05D009692 3.0e-18 96.7 278 32.7
Gohir.D09G244550 Gossypium hirsutum HOM05D007687 ORTHO05D009692 4.0e-18 96.3 294 32.3
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 5.2e-18 95.9 182 39.0
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 2.0e-17 94.0 269 33.8
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 2.0e-17 94.0 242 35.1
Aa31LG11G2410 Aethionema arabicum HOM05D007687 ORTHO05D009692 5.7e-17 92.4 212 35.4
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 1.3e-16 91.3 144 40.3
BcaC04g23476 Brassica carinata HOM05D007687 ORTHO05D009692 1.7e-16 90.9 277 30.3
CsaV3_1G006250 Cucumis sativus L. HOM05D007687 ORTHO05D009692 3.7e-16 89.7 258 30.2
C09p07960 Brassica napus HOM05D007687 ORTHO05D009692 6.3e-16 89.0 277 30.0
Carub.0008s2158 Capsella rubella HOM05D007687 ORTHO05D009692 6.3e-16 89.0 282 29.8
BolC9t53708H Brassica oleracea HOM05D007687 ORTHO05D009692 8.3e-16 88.6 277 30.0
BcaB04g19894 Brassica carinata HOM05D007687 ORTHO05D009692 1.8e-15 87.4 277 28.9
Glyma.17G081600 Glycine max HOM05D007687 ORTHO05D009692 1.8e-15 87.4 264 34.5
A09p07100 Brassica napus HOM05D007687 ORTHO05D009692 3.1e-15 86.7 277 29.2
BraA09t36360Z Brassica rapa HOM05D007687 ORTHO05D009692 3.1e-15 86.7 277 29.6
Cpa.g.sc3.233 Carica papaya HOM05D007687 ORTHO05D009692 3.1e-15 86.7 214 36.4
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 2.0e-14 84.0 154 39.6
CANSAT56G0292 Cannabis sativa HOM05D007687 ORTHO05D009692 3.5e-14 83.2 187 32.6
CANSAT56G1485 Cannabis sativa HOM05D007687 ORTHO05D009692 3.5e-14 83.2 187 32.6
Phvul.003G182300 Phaseolus vulgaris HOM05D007687 ORTHO05D009692 1.0e-13 81.6 183 35.0
Ca_21756_v3 Cicer arietinum L. HOM05D007687 ORTHO05D009692 2.2e-13 80.5 180 35.0
SGA_v2.0_scaffold105G30431 Striga asiatica HOM05D007687 ORTHO05D009692 1.9e-12 77.4 277 29.6
Dinv17458 Davidia involucrata HOM05D007687 ORTHO05D009692 1.6e-11 74.3 150 34.7
Haze_19876 Corylus avellana HOM05D007687 ORTHO05D009692 1.0e-10 71.6 167 35.3
Medtr4g109950 Medicago truncatula HOM05D007687 ORTHO05D009692 1.8e-10 70.9 186 34.4
Ah.11g047410 Amaranthus hybridus HOM05D024623 ORTHO05D023410 2.8e-08 63.5 58 58.6
TPR.G7811 Trifolium pratense HOM05D007687 ORTHO05D009692 1.4e-07 61.2 188 31.4
Glyma.05G018400 Glycine max HOM05D007687 ORTHO05D009692 2.4e-07 60.5 259 30.9
unitig_578.g15936 Utricularia gibba HOM05D007687 ORTHO05D009692 1.2e-06 58.2 169 33.1
Haze_18510 Corylus avellana HOM05D007687 ORTHO05D009692 1.6e-06 57.8 154 33.8
MELO3C002053.2 Cucumis melo HOM05D007687 ORTHO05D009692 4.5e-06 56.2 173 27.7


User provided reference genes

Program Settings