Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G036900 Populus trichocarpa HOM05D006794 ORTHO05D008322 3.1e-89 332.0 197 100.0
Sabra15G0031400 Salix brachista HOM05D006794 ORTHO05D008322 1.4e-78 296.6 197 83.2
Potri.012G045700 Populus trichocarpa HOM05D006794 ORTHO05D008322 2.9e-71 272.3 197 87.3
RcHm_v2.0_Chr7g0178231 Rosa chinensis HOM05D006794 ORTHO05D008322 1.5e-48 196.8 199 73.4
Duzib068G0617 Durio zibethinus HOM05D006794 ORTHO05D008322 7.6e-48 194.5 203 59.6
FvH4_5g17460 Fragaria vesca HOM05D006794 ORTHO05D008322 1.3e-47 193.7 199 72.9
FAN18G3906 Fragaria x ananassa HOM05D006794 ORTHO05D008322 1.3e-47 193.7 199 72.9
Thecc.03G058000 Theobroma cacao HOM05D006794 ORTHO05D008322 1.7e-47 193.4 203 58.1
Duzib084G0148 Durio zibethinus HOM05D006794 ORTHO05D008322 6.5e-47 191.4 204 59.3
FAN13G2800 Fragaria x ananassa HOM05D006794 ORTHO05D008322 8.4e-47 191.0 199 67.3
MD14G1237200 Malus domestica HOM05D006794 ORTHO05D008322 8.4e-47 191.0 211 70.6
CiPaw.15G144200 Carya illinoinensis HOM05D006794 ORTHO05D008322 1.9e-46 189.9 205 59.0
FAN08G0189 Fragaria x ananassa HOM05D006794 ORTHO05D008322 3.2e-46 189.1 194 72.7
CiPaw.16G095900 Carya illinoinensis HOM05D006794 ORTHO05D008322 1.6e-45 186.8 203 58.6
FAN04G0930 Fragaria x ananassa HOM05D006794 ORTHO05D008322 2.1e-45 186.4 194 71.6
Cpa.g.sc3.383 Carica papaya HOM05D006794 ORTHO05D008322 4.6e-45 185.3 205 66.3
Cfa021396 Carpinus fangiana HOM05D006794 ORTHO05D008322 4.6e-45 185.3 204 65.7
Dinv08202 Davidia involucrata HOM05D006794 ORTHO05D008322 7.9e-45 184.5 208 70.2
Lj2g0023485 Lotus japonicus HOM05D006794 ORTHO05D008322 1.0e-44 184.1 202 67.8
QL10p030576 Quercus lobata HOM05D006794 ORTHO05D008322 1.3e-44 183.7 209 57.9
Medtr6g069830 Medicago truncatula HOM05D006794 ORTHO05D008322 5.1e-44 181.8 202 65.8
CANSAT80G2635 Cannabis sativa HOM05D006794 ORTHO05D008322 6.7e-44 181.4 210 66.7
CANSAT80G0659 Cannabis sativa HOM05D006794 ORTHO05D008322 1.1e-43 180.6 212 67.9
ClCG04G010570 Citrullus lanatus HOM05D006794 ORTHO05D008322 1.1e-43 180.6 202 63.4
Hma1.2p1_0163F.1_g073020 Hydrangea macrophylla HOM05D006794 ORTHO05D008322 1.1e-43 180.6 206 68.9
Glyma.09G174700 Glycine max HOM05D006794 ORTHO05D008322 1.5e-43 180.3 202 66.8
MD06G1228000 Malus domestica HOM05D006794 ORTHO05D008322 1.5e-43 180.3 207 69.6
Prupe.5G234500 Prunus persica HOM05D006794 ORTHO05D008322 1.9e-43 179.9 209 67.9
Phvul.002G330800 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 2.5e-43 179.5 202 67.3
Sabra12G0031800 Salix brachista HOM05D006794 ORTHO05D008322 2.5e-43 179.5 153 81.0
Phvul.004G150000 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 3.3e-43 179.1 202 66.3
arahy.Tifrunner.gnm1.ann1.PNUX28 Arachis hypogaea HOM05D006794 ORTHO05D008322 5.7e-43 178.3 206 67.5
TWI81G0550 Tripterygium wilfordii HOM05D006794 ORTHO05D008322 5.7e-43 178.3 202 61.9
VMungo0464G2014 Vigna mungo HOM05D006794 ORTHO05D008322 7.4e-43 177.9 202 65.8
TPR.G8635 Trifolium pratense HOM05D006794 ORTHO05D008322 9.6e-43 177.6 203 66.5
VMungo0251G1205 Vigna mungo HOM05D006794 ORTHO05D008322 9.6e-43 177.6 202 68.3
arahy.Tifrunner.gnm1.ann1.AT27RE Arachis hypogaea HOM05D006794 ORTHO05D008322 1.6e-42 176.8 206 67.0
Sed0024550 Sechium edule HOM05D006794 ORTHO05D008322 2.1e-42 176.4 202 66.3
CSS0048798 Camellia sinensis var. sinensis HOM05D006794 ORTHO05D008322 3.7e-42 175.6 206 67.5
Manes.06G005000 Manihot esculenta HOM05D006794 ORTHO05D008322 3.7e-42 175.6 208 60.6
Gorai.008G290400 Gossypium raimondii HOM05D006794 ORTHO05D008322 4.8e-42 175.3 209 56.0
PGR083G0475 Punica granatum HOM05D006794 ORTHO05D008322 1.4e-41 173.7 204 66.2
Glyma.08G055100 Glycine max HOM05D006794 ORTHO05D008322 9.0e-41 171.0 202 65.8
arahy.Tifrunner.gnm1.ann1.KQ26AL Arachis hypogaea HOM05D006794 ORTHO05D008322 2.0e-40 169.9 202 55.4
arahy.Tifrunner.gnm1.ann1.P2R0G6 Arachis hypogaea HOM05D006794 ORTHO05D008322 2.0e-40 169.9 202 55.4
Lalb_Chr22g0353521 Lupinus albus HOM05D006794 ORTHO05D008322 7.6e-40 167.9 204 63.7
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 1.3e-39 167.2 202 64.4
Sopen03g037580 Solanum pennellii HOM05D006794 ORTHO05D008322 2.9e-39 166.0 205 62.4
Eucgr.B00988 Eucalyptus grandis HOM05D006794 ORTHO05D008322 6.5e-39 164.9 206 65.0
Lalb_Chr16g0386961 Lupinus albus HOM05D006794 ORTHO05D008322 6.5e-39 164.9 200 55.0
MD01G1007300 Malus domestica HOM05D006794 ORTHO05D008322 8.4e-39 164.5 201 59.2
Solyc03g118630.3 Solanum lycopersicum HOM05D006794 ORTHO05D008322 1.9e-38 163.3 205 61.0
GSVIVG01008463001 Vitis vinifera HOM05D006794 ORTHO05D008322 2.5e-38 162.9 206 54.9
PGSC0003DMG400005675 Solanum tuberosum HOM05D006794 ORTHO05D008322 5.5e-38 161.8 208 63.5
Atru.chr9.1672 Acer truncatum HOM05D006794 ORTHO05D008322 9.3e-38 161.0 211 59.2
Cc04_g06140 Coffea canephora HOM05D006794 ORTHO05D008322 6.1e-37 158.3 214 60.3
Nitab4.5_0001264g0020 Nicotiana tabacum HOM05D006794 ORTHO05D008322 6.1e-37 158.3 215 62.3
Migut.D01320 Erythranthe guttata HOM05D006794 ORTHO05D008322 3.7e-34 149.1 185 51.9
Lsat_1_v5_gn_5_175480 Lactuca sativa HOM05D006794 ORTHO05D008322 4.1e-33 145.6 212 57.1
TAR622G0128 Trochodendron aralioides HOM05D006794 ORTHO05D008322 1.2e-32 144.1 203 62.6
Psat4g000080 Pisum sativum HOM05D006794 ORTHO05D008322 5.9e-32 141.7 203 49.8
THA.LOC104825595 Tarenaya hassleriana HOM05D006794 ORTHO05D008322 6.5e-31 138.3 198 47.5
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 9.4e-30 134.4 173 66.5
HanXRQChr01g0012541 Helianthus annuus HOM05D006794 ORTHO05D008322 1.6e-29 133.7 209 58.9
Lj4g0014763 Lotus japonicus HOM05D006794 ORTHO05D008322 1.6e-29 133.7 199 47.7
Oeu046160.1 Olea europaea HOM05D006794 ORTHO05D008322 7.9e-29 131.3 206 46.6
Nn4g24277 Nelumbo nucifera HOM05D006794 ORTHO05D008322 1.4e-28 130.6 219 49.8
DCAR_013026 Daucus carota HOM05D006794 ORTHO05D008322 6.7e-28 128.3 196 55.6
A03p40470 Brassica napus HOM05D006794 ORTHO05D008322 1.1e-27 127.5 209 51.2
AL3G31120 Arabidopsis lyrata HOM05D006794 ORTHO05D008322 2.5e-27 126.3 207 56.0
BcaC01g03720 Brassica carinata HOM05D006794 ORTHO05D008322 2.5e-27 126.3 217 51.2
C03p49310 Brassica napus HOM05D006794 ORTHO05D008322 7.4e-27 124.8 217 50.7
BcaB04g18974 Brassica carinata HOM05D006794 ORTHO05D008322 9.7e-27 124.4 219 50.7
Sp3g16080 Schrenkiella parvula HOM05D006794 ORTHO05D008322 9.7e-27 124.4 219 43.4
BcaC09g48759 Brassica carinata HOM05D006794 ORTHO05D008322 1.7e-26 123.6 216 45.4
C01p46200 Brassica napus HOM05D006794 ORTHO05D008322 1.7e-26 123.6 216 45.4
BolC1t04582H Brassica oleracea HOM05D006794 ORTHO05D008322 1.7e-26 123.6 216 45.4
Carub.0003s1768 Capsella rubella HOM05D006794 ORTHO05D008322 2.2e-26 123.2 214 55.1
PSO210G4985 Papaver somniferum HOM05D006794 ORTHO05D008322 2.2e-26 123.2 223 42.6
PSO832G1236 Papaver somniferum HOM05D006794 ORTHO05D008322 2.8e-26 122.9 223 42.2
COL.COLO4_04996 Corchorus olitorius HOM05D006794 ORTHO05D008322 6.3e-26 121.7 164 65.2
Thhalv10021515m.g Eutrema salsugineum HOM05D006794 ORTHO05D008322 2.4e-25 119.8 218 53.7
BcaB04g20803 Brassica carinata HOM05D006794 ORTHO05D008322 5.3e-25 118.6 216 55.1
Ca_25344_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 9.1e-25 117.9 158 62.0
BraA01t03709Z Brassica rapa HOM05D006794 ORTHO05D008322 2.0e-24 116.7 218 53.7
Haze_18880 Corylus avellana HOM05D006794 ORTHO05D008322 2.0e-24 116.7 163 55.8
MBI19_g22477_MAGBIO Magnolia biondii HOM05D006794 ORTHO05D008322 4.5e-24 115.5 197 48.7
vmacro16409 Vaccinium macrocarpon HOM05D006794 ORTHO05D008322 1.3e-23 114.0 182 57.1
A01p36460 Brassica napus HOM05D006794 ORTHO05D008322 8.5e-23 111.3 221 52.5
ECA248G0187 Erigeron canadensis HOM05D006794 ORTHO05D008322 1.1e-22 110.9 208 52.4
MELO3C002138.2 Cucumis melo HOM05D006794 ORTHO05D008322 1.4e-22 110.5 158 58.2
SalBow1G0629 Salvia bowleyana HOM05D006794 ORTHO05D008322 2.5e-22 109.8 157 62.4
Psat1g031080 Pisum sativum HOM05D006794 ORTHO05D008322 4.2e-22 109.0 161 59.6
Glyma.07G103100 Glycine max HOM05D006794 ORTHO05D008322 7.2e-22 108.2 158 61.4
Nitab4.5_0010223g0030 Nicotiana tabacum HOM05D006794 ORTHO05D008322 6.1e-21 105.1 217 51.6
HPP92_008000 Vanilla planifolia HOM05D006794 ORTHO05D008322 8.8e-20 101.3 188 49.5
Gohir.A12G269600 Gossypium hirsutum HOM05D006794 ORTHO05D008322 3.3e-19 99.4 164 45.1
Gohir.D12G270100 Gossypium hirsutum HOM05D006794 ORTHO05D008322 5.7e-19 98.6 165 44.8
CANSAT64G0030 Cannabis sativa HOM05D006794 ORTHO05D008322 1.2e-16 90.9 160 50.6
CARHR093280 Cardamine hirsuta HOM05D006794 ORTHO05D008322 4.5e-16 89.0 187 50.8
Peaxi162Scf00314g00315 Petunia axillaris HOM05D006794 ORTHO05D008322 5.9e-16 88.6 163 57.7
Ca_17183_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 6.5e-15 85.1 92 58.7
AT3G17950 Arabidopsis thaliana HOM05D006794 ORTHO05D008322 9.4e-14 81.3 185 50.3
Aa31LG8G4820 Aethionema arabicum HOM05D006794 ORTHO05D008322 1.1e-11 74.3 186 39.8
SGA_v2.0_scaffold172G39018 Striga asiatica HOM05D006794 ORTHO05D008322 2.0e-11 73.6 138 41.3
Ciclev10009814m.g Citrus clementina HOM05D006794 ORTHO05D008322 3.3e-11 72.8 154 48.7
Oeu004474.1 Olea europaea HOM05D006794 ORTHO05D008322 3.3e-11 72.8 57 71.9
CDE05G2986 Ceratophyllum demersum HOM05D006794 ORTHO05D008322 2.8e-10 69.7 161 38.5
CDE07G1050 Ceratophyllum demersum HOM05D006794 ORTHO05D008322 3.7e-10 69.3 58 74.1
C05p26280 Brassica napus HOM05D006794 ORTHO05D008322 1.1e-09 67.8 84 54.8
Os02g0733400 Oryza sativa ssp. japonica HOM05D006794 ORTHO05D008322 4.5e-08 62.4 189 45.5
Os06g0256800 Oryza sativa ssp. japonica HOM05D006794 ORTHO05D008322 1.3e-07 60.8 204 39.2
Haze_13383 Corylus avellana HOM05D006794 ORTHO05D008322 1.7e-07 60.5 88 52.3
ATR0559G115 Amborella trichopoda HOM05D003527 ORTHO05D004099 2.2e-07 60.1 162 35.2
Nn2g10383 Nelumbo nucifera HOM05D003527 ORTHO05D004099 5.0e-07 58.9 194 34.0
SEGI_38129 Sequoiadendron giganteum HOM05D003527 ORTHO05D004099 1.1e-06 57.8 160 34.4
Actinidia23946 Actinidia chinensis HOM05D003527 ORTHO05D004099 2.5e-06 56.6 153 32.7
HanXRQChr08g0234711 Helianthus annuus HOM05D003527 ORTHO05D004099 2.5e-06 56.6 35 82.9
MBI05_g30238_MAGBIO Magnolia biondii HOM05D003527 ORTHO05D004099 3.2e-06 56.2 159 32.1
CANSAT35G0216 Cannabis sativa HOM05D003527 ORTHO05D004099 4.2e-06 55.8 36 75.0
Nn2g15270 Nelumbo nucifera HOM05D006794 ORTHO05D008322 4.2e-06 55.8 124 37.9
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 5.5e-06 55.5 36 72.2
Eucgr.J02057 Eucalyptus grandis HOM05D003527 ORTHO05D004099 5.5e-06 55.5 159 34.0
MD03G1096000 Malus domestica HOM05D003527 ORTHO05D004099 5.5e-06 55.5 163 31.3
QL01p032299 Quercus lobata HOM05D003527 ORTHO05D004099 5.5e-06 55.5 125 39.2
QL07p048124 Quercus lobata HOM05D003527 ORTHO05D004099 5.5e-06 55.5 35 80.0
Hund04968 Selenicereus undatus HOM05D003527 ORTHO05D004099 5.5e-06 55.5 35 80.0
Ah.08g219410 Amaranthus hybridus HOM05D003527 ORTHO05D004099 7.2e-06 55.1 35 80.0
EL10Ac7g16007 Beta vulgaris HOM05D003527 ORTHO05D004099 7.2e-06 55.1 35 80.0
Gorai.001G110200 Gossypium raimondii HOM05D003527 ORTHO05D004099 7.2e-06 55.1 35 77.1
Manes.04G034300 Manihot esculenta HOM05D003527 ORTHO05D004099 7.2e-06 55.1 35 80.0
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 9.4e-06 54.7 35 77.1


User provided reference genes

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