Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 7.9e-182 641.7 327 100.0
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 6.9e-154 548.9 312 89.1
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 6.7e-149 532.3 313 87.9
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 7.6e-68 263.1 269 48.0
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 6.7e-64 250.0 256 46.1
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 3.1e-61 241.1 255 45.9
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.2e-57 229.2 301 44.2
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.2e-57 229.2 301 44.2
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 1.8e-56 225.3 288 45.1
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 2.3e-56 224.9 304 44.1
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 1.3e-54 219.2 262 46.2
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 1.4e-53 215.7 254 44.9
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 1.4e-53 215.7 238 46.6
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 3.6e-49 201.1 273 41.0
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 5.1e-48 197.2 246 44.3
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 1.7e-46 192.2 238 43.7
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 6.3e-46 190.3 232 45.7
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 1.1e-45 189.5 229 44.1
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 5.5e-42 177.2 229 41.0
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 1.6e-41 175.6 269 36.4
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 3.6e-41 174.5 256 37.9
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 6.1e-41 173.7 268 39.2
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 1.8e-40 172.2 229 43.7
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.8e-40 172.2 227 40.5
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 8.8e-40 169.9 236 40.3
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 4.4e-39 167.5 237 38.8
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 9.7e-39 166.4 247 39.3
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 8.2e-38 163.3 238 40.8
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 3.1e-37 161.4 302 31.1
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 7.7e-36 156.8 183 44.3
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 1.0e-35 156.4 221 36.2
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 3.8e-35 154.5 221 35.7
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 5.0e-35 154.1 211 39.8
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 8.5e-35 153.3 196 40.8
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 7.2e-34 150.2 225 35.6
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 1.6e-33 149.1 207 38.2
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 1.6e-33 149.1 187 41.2
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 2.0e-31 142.1 177 42.9
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 5.7e-31 140.6 201 38.3
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 7.4e-31 140.2 212 38.2
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.3e-30 139.4 201 39.8
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 2.2e-30 138.7 166 42.8
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 4.8e-30 137.5 276 32.2
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 9.4e-26 123.2 179 40.8
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 1.6e-25 122.5 220 32.7
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 2.0e-23 115.5 178 36.0
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 2.2e-19 102.1 178 33.7
AL1G45930 Arabidopsis lyrata HOM05D008483 ORTHO05D010726 9.4e-18 96.7 116 43.1
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 5.2e-16 90.9 187 31.6
Potri.015G105400 Populus trichocarpa HOM05D005764 ORTHO05D006600 4.7e-09 67.8 242 26.4
AL3G51870 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 1.8e-08 65.9 227 26.9
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 3.0e-08 65.1 100 34.0
CARHR109130 Cardamine hirsuta HOM05D000891 ORTHO05D000761 4.0e-08 64.7 215 27.0
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 1.5e-07 62.8 235 21.3
BraA09t36840Z Brassica rapa HOM05D000891 ORTHO05D000761 2.0e-07 62.4 228 28.5
BcaC04g22899 Brassica carinata HOM05D000891 ORTHO05D000761 2.6e-07 62.0 228 28.5
BolC9t54304H Brassica oleracea HOM05D000891 ORTHO05D000761 2.6e-07 62.0 228 28.5
Nn5g27729 Nelumbo nucifera HOM05D006287 ORTHO05D008192 2.6e-07 62.0 180 23.9
C09p14070 Brassica napus HOM05D000891 ORTHO05D000761 3.4e-07 61.6 228 28.5
Aa31LG6G13480 Aethionema arabicum HOM05D000891 ORTHO05D000761 4.4e-07 61.2 227 25.6
AT2G18520 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 4.4e-07 61.2 227 25.6
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 5.7e-07 60.8 236 24.6
MD13G1010900 Malus domestica HOM05D007280 ORTHO05D009108 5.7e-07 60.8 154 24.7
A09p11950 Brassica napus HOM05D000891 ORTHO05D000761 1.3e-06 59.7 228 28.1
Sc05g0000860 Simmondsia chinensis HOM05D000162 ORTHO05D000090 2.8e-06 58.5 164 22.6
BcaB07g31660 Brassica carinata HOM05D000891 ORTHO05D000761 4.9e-06 57.8 229 27.5
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 4.9e-06 57.8 110 26.4
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 4.9e-06 57.8 110 26.4
CDE04G0172 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 6.3e-06 57.4 120 26.7
CAN.G805.2 Capsicum annuum HOM05D005764 ORTHO05D006600 8.3e-06 57.0 193 21.2


User provided reference genes

Program Settings