Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 6.3e-109 397.5 211 100.0
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 2.9e-106 388.7 209 97.6
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 7.1e-76 287.7 209 75.1
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 6.0e-75 284.6 209 72.7
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 2.3e-74 282.7 210 73.3
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 3.9e-74 282.0 210 72.9
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 3.9e-74 282.0 210 72.9
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 1.5e-73 280.0 209 72.7
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 9.6e-73 277.3 209 70.8
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 8.1e-72 274.2 209 68.9
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 8.1e-72 274.2 209 69.9
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 8.1e-72 274.2 209 69.9
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.1e-71 273.9 209 71.3
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 1.4e-71 273.5 209 71.3
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 1.4e-71 273.5 209 70.8
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.8e-71 273.1 209 71.8
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 2.4e-71 272.7 209 70.3
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 2.4e-71 272.7 209 69.4
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 3.1e-71 272.3 209 70.3
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 5.3e-71 271.6 209 71.3
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 9.0e-71 270.8 209 71.3
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.6e-70 269.2 213 67.6
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 5.8e-70 268.1 209 66.0
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 5.8e-70 268.1 209 68.9
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 7.6e-70 267.7 210 69.5
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 7.6e-70 267.7 214 68.2
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 9.9e-70 267.3 213 69.5
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 9.9e-70 267.3 209 67.9
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.3e-69 266.9 209 68.9
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 1.3e-69 266.9 209 68.9
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 2.2e-69 266.2 209 69.9
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.8e-69 265.4 209 66.5
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 3.8e-69 265.4 209 68.4
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 6.4e-69 264.6 209 66.5
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 6.4e-69 264.6 209 66.5
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 6.4e-69 264.6 209 66.5
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 1.9e-68 263.1 212 67.9
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.9e-68 263.1 209 66.0
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 1.9e-68 263.1 209 68.4
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 4.2e-68 261.9 209 67.5
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 9.3e-68 260.8 212 67.0
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 9.3e-68 260.8 214 65.9
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 4.6e-67 258.5 209 65.6
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 4.6e-67 258.5 209 67.9
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 4.6e-67 258.5 208 67.8
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 4.6e-67 258.5 213 68.5
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 6.0e-67 258.1 208 67.3
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 1.0e-66 257.3 213 66.7
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 1.3e-66 256.9 215 64.2
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.3e-66 256.9 215 64.2
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 1.3e-66 256.9 212 65.1
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 1.7e-66 256.5 212 67.5
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 1.7e-66 256.5 208 66.8
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 3.0e-66 255.8 180 73.3
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 3.9e-66 255.4 213 66.7
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 5.1e-66 255.0 209 65.6
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 5.1e-66 255.0 209 64.1
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 6.6e-66 254.6 208 67.3
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 6.6e-66 254.6 212 66.5
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 8.7e-66 254.2 209 66.0
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 8.7e-66 254.2 209 67.0
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 8.7e-66 254.2 209 66.5
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.1e-65 253.8 211 64.9
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 1.1e-65 253.8 212 67.9
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 1.9e-65 253.1 233 62.2
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 2.5e-65 252.7 209 65.1
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 2.5e-65 252.7 216 64.4
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 2.5e-65 252.7 215 66.5
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 4.3e-65 251.9 208 65.4
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 4.3e-65 251.9 209 66.5
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 5.6e-65 251.5 209 64.6
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 9.6e-65 250.8 180 71.7
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 9.6e-65 250.8 209 64.6
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 9.6e-65 250.8 209 64.6
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 1.3e-64 250.4 209 64.6
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 1.6e-64 250.0 209 65.1
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.6e-64 250.0 214 65.4
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 2.1e-64 249.6 209 64.6
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 2.8e-64 249.2 209 64.1
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 3.6e-64 248.8 209 64.6
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 3.6e-64 248.8 216 65.3
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 6.2e-64 248.1 209 63.6
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 8.1e-64 247.7 209 63.2
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 3.1e-63 245.7 180 70.0
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 4.0e-63 245.4 172 72.1
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 3.4e-62 242.3 180 70.0
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 6.4e-61 238.0 213 62.4
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 1.9e-60 236.5 238 57.1
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 5.4e-60 235.0 209 61.2
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 9.3e-60 234.2 196 63.3
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 1.2e-59 233.8 209 63.6
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 3.5e-59 232.3 223 59.2
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 3.0e-58 229.2 217 58.1
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 3.9e-58 228.8 180 66.1
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 2.4e-55 219.5 195 64.6
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 3.4e-54 215.7 173 65.3
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 1.1e-52 210.7 155 71.6
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 1.9e-52 209.9 177 63.8
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 7.1e-52 208.0 209 55.5
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 7.1e-52 208.0 198 58.1
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 8.7e-50 201.1 193 60.1
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 2.4e-47 193.0 209 56.0
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 4.1e-47 192.2 209 54.1
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 6.9e-47 191.4 158 68.4
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.2e-46 190.7 215 53.5
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 1.8e-42 176.8 144 61.8
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 6.3e-40 168.3 165 52.7
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 2.5e-36 156.4 182 46.7
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 4.2e-36 155.6 187 44.9
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 6.7e-34 148.3 208 43.3
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 2.0e-33 146.7 117 65.8
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 2.0e-33 146.7 173 47.4
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 1.1e-31 141.0 206 43.2
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 2.2e-29 133.3 209 42.1
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 4.0e-18 95.9 94 55.3
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 4.0e-18 95.9 83 65.1
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 1.1e-17 94.4 176 34.1
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 5.5e-12 75.5 60 63.3
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 4.0e-10 69.3 61 60.7


User provided reference genes

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