Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.0e-102 377.1 244 100.0
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 1.1e-43 181.0 174 65.5
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 5.9e-42 175.3 158 66.5
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.5e-40 170.6 160 65.0
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.3e-40 169.5 158 68.4
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 2.6e-37 159.8 157 76.4
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 4.4e-37 159.1 158 83.5
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 2.2e-36 156.8 158 59.5
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 4.9e-36 155.6 158 69.0
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 8.3e-36 154.8 97 88.7
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.1e-35 154.5 157 58.6
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 2.4e-35 153.3 156 59.6
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 3.1e-35 152.9 160 60.6
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 4.1e-35 152.5 174 55.2
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 7.0e-35 151.8 156 60.9
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 9.2e-35 151.4 150 62.0
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 9.2e-35 151.4 150 62.0
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.2e-34 151.0 158 58.9
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.2e-34 151.0 157 59.9
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 1.6e-34 150.6 153 74.5
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.0e-34 150.2 156 60.3
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 2.0e-34 150.2 157 73.2
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 2.7e-34 149.8 153 58.8
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 3.5e-34 149.4 144 59.7
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 3.5e-34 149.4 144 59.7
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 3.5e-34 149.4 144 59.7
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 3.5e-34 149.4 156 59.6
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 3.5e-34 149.4 157 58.6
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 4.5e-34 149.1 153 58.8
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 5.9e-34 148.7 153 58.8
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 5.9e-34 148.7 157 58.0
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 5.9e-34 148.7 155 58.7
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 7.8e-34 148.3 144 59.0
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 7.8e-34 148.3 144 59.0
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 7.8e-34 148.3 144 59.0
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 7.8e-34 148.3 144 59.0
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 7.8e-34 148.3 144 59.0
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 7.8e-34 148.3 144 59.0
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 1.0e-33 147.9 144 58.3
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.0e-33 147.9 144 59.7
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 1.0e-33 147.9 144 59.0
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 2.3e-33 146.7 176 75.0
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 2.3e-33 146.7 154 60.4
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.3e-33 146.7 154 60.4
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.3e-33 146.7 154 60.4
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.9e-33 146.4 158 55.7
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 2.9e-33 146.4 153 56.9
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 2.9e-33 146.4 152 59.2
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.9e-33 146.4 156 59.6
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 2.9e-33 146.4 165 54.5
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 3.8e-33 146.0 144 57.6
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 3.8e-33 146.0 162 66.7
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 5.0e-33 145.6 153 60.8
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 5.0e-33 145.6 152 59.9
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 6.6e-33 145.2 143 58.0
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 6.6e-33 145.2 154 59.7
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 6.6e-33 145.2 154 59.7
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 8.6e-33 144.8 155 57.4
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 8.6e-33 144.8 155 58.1
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.5e-32 144.1 155 57.4
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 1.5e-32 144.1 161 55.3
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.9e-32 143.7 158 55.7
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.9e-32 143.7 164 53.0
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.9e-32 143.7 156 57.1
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 2.5e-32 143.3 162 56.2
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 3.3e-32 142.9 156 59.6
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 4.3e-32 142.5 157 58.0
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 4.3e-32 142.5 157 58.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 4.3e-32 142.5 155 82.6
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 5.6e-32 142.1 164 56.7
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 9.5e-32 141.4 144 58.3
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 1.2e-31 141.0 153 56.2
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.6e-31 140.6 144 56.2
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.6e-31 140.6 157 55.4
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.1e-31 140.2 179 70.4
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 3.6e-31 139.4 156 55.8
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 3.6e-31 139.4 145 57.9
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 3.6e-31 139.4 164 53.0
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 3.6e-31 139.4 160 55.0
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 8.0e-31 138.3 158 71.5
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 8.0e-31 138.3 157 58.6
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.0e-30 137.9 159 54.1
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.0e-30 137.9 157 53.5
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.1e-30 136.3 158 78.5
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 3.1e-30 136.3 158 78.5
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 4.0e-30 136.0 153 70.6
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 8.9e-30 134.8 143 56.6
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 8.9e-30 134.8 143 56.6
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.2e-29 134.4 141 56.7
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 2.0e-29 133.7 152 53.3
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 2.6e-29 133.3 144 61.8
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 3.4e-29 132.9 149 54.4
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 4.4e-29 132.5 97 79.4
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 9.8e-29 131.3 151 53.6
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 1.7e-28 130.6 157 53.5
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 2.2e-28 130.2 97 78.4
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 4.9e-28 129.0 145 53.8
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 4.9e-28 129.0 159 51.6
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.1e-27 127.9 131 58.8
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 1.4e-27 127.5 146 52.7
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 7.0e-27 125.2 156 51.3
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.6e-26 124.0 150 50.7
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 7.8e-26 121.7 156 48.1
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 7.8e-26 121.7 97 73.2
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 1.3e-25 120.9 97 74.2
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 1.5e-24 117.5 140 50.0
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.6e-23 114.0 158 48.1
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 2.1e-23 113.6 86 72.1
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 2.8e-23 113.2 98 65.3
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 4.0e-22 109.4 143 44.8
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 2.6e-21 106.7 126 82.5
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 4.4e-21 105.9 90 66.7
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 5.8e-21 105.5 127 54.3
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 5.8e-21 105.5 86 67.4
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.3e-20 104.4 154 48.1
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.1e-19 101.3 81 67.9
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 1.3e-17 94.4 158 43.7
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 5.6e-16 89.0 153 37.3
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.8e-14 84.0 138 35.5
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.2e-10 71.2 128 68.0
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 4.6e-10 69.3 145 32.4
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 1.3e-09 67.8 58 62.1
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.7e-09 67.4 92 47.8
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.1e-08 64.7 44 77.3


User provided reference genes

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