Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.5e-176 622.9 343 100.0
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 6.7e-124 448.0 275 92.0
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 3.6e-101 372.5 283 78.8
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 7.4e-91 338.2 281 70.8
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 3.8e-79 299.3 281 65.8
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 1.3e-55 221.1 361 50.1
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 2.1e-53 213.8 367 48.0
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 4.7e-53 212.6 370 44.3
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 9.2e-49 198.4 360 44.2
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 5.6e-46 189.1 370 44.3
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 1.8e-44 184.1 370 44.1
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 8.9e-44 181.8 327 46.8
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 2.0e-43 180.6 345 43.5
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 9.2e-41 171.8 376 38.6
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 2.7e-40 170.2 348 42.5
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 9.5e-38 161.8 353 43.3
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 6.2e-37 159.1 381 40.7
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 8.1e-37 158.7 369 40.7
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 5.2e-36 156.0 381 39.1
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 4.9e-34 149.4 346 41.9
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 8.3e-34 148.7 259 42.5
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 8.3e-34 148.7 259 42.5
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 8.3e-34 148.7 259 42.5
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 3.2e-33 146.7 295 43.4
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 9.2e-33 145.2 357 38.1
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 1.0e-31 141.7 416 36.8
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 1.3e-31 141.4 363 37.7
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.3e-31 141.4 354 38.4
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.9e-30 137.5 357 37.3
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 2.5e-30 137.1 348 36.8
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 3.3e-30 136.7 376 35.4
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 5.6e-30 136.0 352 37.2
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 9.6e-30 135.2 362 38.4
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 6.2e-29 132.5 258 39.9
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 1.4e-28 131.3 360 36.7
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 1.4e-28 131.3 368 36.4
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 3.1e-28 130.2 376 35.4
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 4.0e-28 129.8 354 35.6
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 5.2e-28 129.4 354 35.6
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 8.9e-28 128.6 278 39.2
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 2.0e-27 127.5 366 35.5
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 2.6e-27 127.1 359 36.2
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 4.4e-27 126.3 254 40.2
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 4.4e-27 126.3 347 34.3
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 4.4e-27 126.3 359 34.0
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 1.7e-26 124.4 352 35.5
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 2.9e-26 123.6 343 35.3
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 3.8e-26 123.2 335 36.7
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 1.1e-25 121.7 353 36.5
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 3.2e-25 120.2 348 33.9
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 9.3e-25 118.6 198 44.9
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 9.3e-25 118.6 358 36.6
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 3.9e-23 113.2 363 34.2
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 2.5e-22 110.5 354 34.2
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 5.6e-22 109.4 326 35.9
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 1.6e-21 107.8 291 33.7
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 2.1e-21 107.5 348 31.9
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 8.1e-21 105.5 262 35.9
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 8.1e-21 105.5 289 33.9
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 2.4e-20 104.0 302 33.4
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 6.9e-20 102.4 339 33.9
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 5.8e-19 99.4 276 35.1
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 2.9e-18 97.1 298 33.9
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 3.8e-18 96.7 350 33.1
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 8.4e-18 95.5 251 35.9
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 1.1e-17 95.1 274 35.0
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 1.1e-17 95.1 241 34.9
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 1.4e-17 94.7 329 32.5
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 1.9e-17 94.4 264 34.1
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 4.2e-17 93.2 348 31.0
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 9.3e-17 92.0 336 31.0
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 9.3e-17 92.0 258 31.4
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 1.6e-16 91.3 367 32.7
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 3.5e-16 90.1 345 31.6
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 7.9e-16 89.0 263 31.6
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 7.9e-16 89.0 338 32.8
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 1.3e-15 88.2 246 31.7
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 1.7e-15 87.8 346 29.8
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 2.3e-15 87.4 320 31.6
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 3.0e-15 87.0 272 32.4
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 1.5e-14 84.7 273 33.3
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 1.9e-14 84.3 322 36.3
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 1.3e-13 81.6 258 31.4
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 1.3e-13 81.6 275 30.9
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 6.2e-13 79.3 281 33.8
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 6.2e-13 79.3 336 30.4
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 1.1e-12 78.6 291 34.0
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 1.1e-12 78.6 182 39.6
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 1.4e-12 78.2 348 28.7
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 1.4e-12 78.2 312 30.4
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 4.0e-12 76.6 284 29.2
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 5.3e-12 76.3 316 33.2
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 5.3e-12 76.3 291 33.3
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 6.9e-12 75.9 347 31.1
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 6.9e-12 75.9 329 29.8
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 2.0e-11 74.3 240 35.0
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 3.4e-11 73.6 275 32.7
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 4.5e-11 73.2 275 32.7
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 1.3e-10 71.6 265 33.6
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 3.8e-10 70.1 326 29.1
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 1.4e-09 68.2 332 29.2
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 3.2e-09 67.0 311 30.2
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 1.6e-08 64.7 279 28.3
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 2.7e-08 63.9 239 29.3
ECA233G0397 Erigeron canadensis HOM05D003457 ORTHO05D009249 9.6e-06 55.5 96 37.5


User provided reference genes

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