Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 9.2e-44 179.9 93 100.0
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 4.9e-37 157.5 93 87.1
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 8.6e-26 120.2 94 73.4
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 1.3e-13 79.7 96 56.2
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 1.7e-13 79.3 96 53.1
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 6.4e-13 77.4 93 51.6
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 3.2e-12 75.1 91 50.5
Gorai.006G203600 Gossypium raimondii HOM05D018669 ORTHO05D011237 3.2e-12 75.1 100 50.0
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 3.2e-12 75.1 104 49.0
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 4.2e-12 74.7 92 52.2
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 5.4e-12 74.3 92 50.0
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 9.3e-12 73.6 98 51.0
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.6e-11 72.8 102 51.0
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 2.1e-11 72.4 101 47.5
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 2.1e-11 72.4 93 53.8
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 2.7e-11 72.0 94 50.0
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 2.7e-11 72.0 93 52.7
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 2.7e-11 72.0 99 49.5
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 6.0e-11 70.9 93 44.1
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 7.8e-11 70.5 97 48.5
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 1.0e-10 70.1 93 49.5
Gohir.D09G181600 Gossypium hirsutum HOM05D018669 ORTHO05D011237 1.3e-10 69.7 100 47.0
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 1.7e-10 69.3 95 49.5
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 2.3e-10 68.9 93 48.4
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 1.1e-09 66.6 113 46.0
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 1.5e-09 66.2 96 47.9
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 1.5e-09 66.2 96 46.9
Sopen03g022070 Solanum pennellii HOM05D008837 ORTHO05D006961 1.5e-09 66.2 104 40.4
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.5e-09 66.2 101 45.5
Nitab4.5_0000319g0160 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.9e-09 65.9 100 48.0
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 2.5e-09 65.5 97 42.3
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 2.5e-09 65.5 93 48.4
DCAR_020369 Daucus carota HOM05D008837 ORTHO05D011237 3.3e-09 65.1 92 44.6
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 4.3e-09 64.7 93 46.2
DCAR_008981 Daucus carota HOM05D008837 ORTHO05D011237 5.6e-09 64.3 96 47.9
Nitab4.5_0000319g0090 Nicotiana tabacum HOM05D008837 ORTHO05D006961 5.6e-09 64.3 107 44.9
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 9.6e-09 63.5 98 46.9
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 9.6e-09 63.5 95 46.3
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.3e-08 63.2 101 44.6
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 2.1e-08 62.4 103 43.7
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 3.6e-08 61.6 103 42.7
vmacro06438 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 3.6e-08 61.6 98 46.9
Carub.0008s1447 Capsella rubella HOM05D011561 ORTHO05D011237 6.2e-08 60.8 93 45.2
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 6.2e-08 60.8 93 41.9
Nitab4.5_0014067g0010 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.8e-07 59.3 95 44.2
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 2.4e-07 58.9 94 44.7
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 2.4e-07 58.9 93 44.1
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 4.0e-07 58.2 94 45.7
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 4.0e-07 58.2 93 44.1
TWI15G0337 Tripterygium wilfordii HOM05D008613 ORTHO05D006961 4.0e-07 58.2 93 41.9
Nn3g18877 Nelumbo nucifera HOM05D031625 ORTHO05D006961 6.9e-07 57.4 98 44.9
Nn3g18879 Nelumbo nucifera HOM05D031625 ORTHO05D006961 6.9e-07 57.4 98 44.9
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 9.0e-07 57.0 92 41.3
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 9.0e-07 57.0 91 44.0
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 9.0e-07 57.0 91 41.8
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 9.0e-07 57.0 95 42.1
Nn1g00438 Nelumbo nucifera HOM05D008613 ORTHO05D006961 1.2e-06 56.6 92 42.4
Sp6g16220 Schrenkiella parvula HOM05D011561 ORTHO05D011237 1.2e-06 56.6 93 41.9
Thhalv10015156m.g Eutrema salsugineum HOM05D011561 ORTHO05D011237 1.5e-06 56.2 92 40.2
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 1.5e-06 56.2 90 40.0
Peaxi162Scf00300g00088 Petunia axillaris HOM05D008837 ORTHO05D006961 2.0e-06 55.8 101 40.6
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 2.0e-06 55.8 96 41.7
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 2.0e-06 55.8 93 43.0
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 2.0e-06 55.8 98 41.8
Ah.13g070730 Amaranthus hybridus HOM05D008613 ORTHO05D011237 2.6e-06 55.5 91 41.8
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.6e-06 55.5 91 42.9
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.6e-06 55.5 91 42.9
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 2.6e-06 55.5 102 42.2
AT5G54165 Arabidopsis thaliana HOM05D011561 ORTHO05D011237 3.4e-06 55.1 93 43.0
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.4e-06 55.1 96 41.7
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.4e-06 55.1 96 41.7
BcaB01g04281 Brassica carinata HOM05D011561 ORTHO05D011237 4.4e-06 54.7 94 40.4
CANSAT21G0289 Cannabis sativa HOM05D018669 ORTHO05D011237 4.4e-06 54.7 94 40.4
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 4.4e-06 54.7 95 43.2
AL8G29380 Arabidopsis lyrata HOM05D011561 ORTHO05D011237 7.6e-06 53.9 92 44.6
Cfa016165 Carpinus fangiana HOM05D001784 ORTHO05D001699 7.6e-06 53.9 86 40.7
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 9.9e-06 53.5 96 42.7
CiPaw.11G110000 Carya illinoinensis HOM05D008613 ORTHO05D006961 9.9e-06 53.5 92 39.1
Sopen03g022090 Solanum pennellii HOM05D008837 ORTHO05D006961 9.9e-06 53.5 92 43.5
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 9.9e-06 53.5 90 40.0


User provided reference genes

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