Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 0.0e+00 1300.4 655 100.0
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 0.0e+00 1175.6 684 87.4
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 1.8e-274 949.1 659 74.1
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 2.5e-265 918.7 662 69.8
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 9.7e-265 916.8 644 71.4
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 1.3e-264 916.4 669 69.7
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 3.7e-264 914.8 659 69.7
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 3.7e-264 914.8 641 71.3
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 3.7e-264 914.8 660 69.8
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 6.3e-264 914.1 659 71.5
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 6.9e-263 910.6 671 70.6
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 1.2e-262 909.8 659 71.0
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 3.4e-262 908.3 667 69.0
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 7.7e-262 907.1 661 69.4
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 2.2e-261 905.6 668 69.6
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 2.2e-261 905.6 641 70.7
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 5.7e-257 891.0 642 70.1
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 9.7e-257 890.2 642 70.1
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 2.4e-255 885.6 677 67.4
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 1.2e-254 883.2 667 67.5
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 2.0e-254 882.5 659 69.0
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 1.2e-251 873.2 657 67.4
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 2.1e-251 872.5 635 69.0
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 5.1e-250 867.8 640 68.1
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 1.5e-246 856.3 658 67.3
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 1.3e-245 853.2 679 66.1
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 1.3e-245 853.2 658 67.2
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 1.3e-245 853.2 608 69.4
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 3.8e-245 851.7 658 67.2
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 9.4e-244 847.0 639 66.2
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 9.4e-244 847.0 673 65.5
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 2.7e-243 845.5 667 65.4
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 4.7e-243 844.7 663 67.3
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 1.8e-242 842.8 663 64.6
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 1.8e-242 842.8 677 65.1
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 3.0e-242 842.0 653 66.5
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 1.3e-240 836.6 668 63.8
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 1.3e-240 836.6 643 65.6
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 3.7e-240 835.1 674 65.0
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 4.8e-240 834.7 662 65.7
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 4.8e-240 834.7 651 66.2
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 6.3e-240 834.3 683 64.1
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 3.1e-239 832.0 653 63.7
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 3.1e-239 832.0 653 66.5
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 2.6e-238 828.9 653 66.3
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 2.2e-237 825.9 658 65.2
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 6.5e-237 824.3 641 65.4
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 8.5e-237 823.9 658 65.5
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 1.5e-236 823.2 674 62.3
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 3.2e-236 822.0 589 69.6
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 4.2e-236 821.6 637 67.2
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 7.2e-236 820.8 658 63.4
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 2.7e-235 818.9 636 64.2
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 2.3e-234 815.8 633 67.0
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 3.0e-234 815.5 653 65.2
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 3.0e-234 815.5 664 63.9
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 3.0e-234 815.5 658 63.1
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 1.2e-233 813.5 630 66.8
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 1.2e-233 813.5 654 64.2
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 1.2e-233 813.5 640 64.5
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 2.0e-233 812.8 668 64.4
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 4.4e-233 811.6 663 62.0
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 5.7e-233 811.2 661 63.8
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 1.7e-232 809.7 652 65.3
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 4.8e-232 808.1 661 63.2
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 1.4e-231 806.6 661 62.6
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 4.1e-231 805.1 638 65.5
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 4.1e-231 805.1 655 65.0
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 7.0e-231 804.3 661 62.5
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 2.7e-230 802.4 664 62.3
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 3.8e-229 798.5 638 65.2
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 2.5e-228 795.8 665 62.7
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 7.2e-228 794.3 661 61.1
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 7.2e-228 794.3 666 62.9
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 7.2e-228 794.3 665 62.7
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 1.2e-227 793.5 656 64.2
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 1.2e-227 793.5 665 62.6
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 2.1e-227 792.7 636 64.6
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 1.4e-226 790.0 639 64.6
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 4.0e-226 788.5 639 64.5
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 8.8e-226 787.3 639 62.8
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 2.6e-225 785.8 657 63.2
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 7.5e-225 784.3 641 63.8
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 3.5e-222 775.4 584 67.6
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 1.3e-221 773.5 630 63.3
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 2.3e-221 772.7 653 60.5
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 6.6e-221 771.2 605 63.3
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 6.6e-221 771.2 603 65.0
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 1.9e-220 769.6 663 60.3
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 3.3e-220 768.8 572 67.8
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 1.6e-219 766.5 638 62.1
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 6.8e-218 761.1 660 62.0
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 2.0e-217 759.6 662 60.3
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 2.0e-217 759.6 623 62.8
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 2.0e-217 759.6 584 67.3
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 8.6e-213 744.2 606 62.7
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 8.0e-211 737.6 631 58.2
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 1.2e-209 733.8 699 57.7
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 7.5e-209 731.1 662 58.2
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 6.6e-205 718.0 568 64.3
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 1.2e-182 644.0 546 59.3
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 2.8e-171 606.3 486 61.5
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 1.8e-170 603.6 558 56.6
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 2.5e-159 566.6 498 61.6
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 4.3e-156 555.8 693 45.3
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 1.6e-155 553.9 570 53.9
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.1e-148 531.2 595 49.7
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 5.1e-141 505.8 424 59.7
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 1.3e-128 464.5 393 66.4
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 2.2e-128 463.8 450 53.8
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 6.1e-126 455.7 658 43.0
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 1.5e-124 451.1 631 42.9
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 3.1e-114 416.8 392 54.3
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 1.6e-113 414.5 791 34.9
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 1.6e-97 361.3 520 41.5
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 5.8e-92 342.8 196 79.1
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 7.5e-84 315.8 281 58.0
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 6.6e-80 302.8 312 52.6
MCO05G006 Micromonas commoda HOM05D005051 ORTHO05D005945 2.8e-70 270.8 609 33.7
QL09p048654 Quercus lobata HOM05D005051 ORTHO05D005945 1.1e-69 268.9 226 58.8
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 1.4e-69 268.5 223 61.9
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 7.8e-65 252.7 217 56.7
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 2.6e-60 237.7 648 30.2
Sed0011580 Sechium edule HOM05D005051 ORTHO05D005945 3.4e-60 237.3 402 42.5
Cfa025345 Carpinus fangiana HOM05D005051 ORTHO05D005945 3.4e-52 210.7 656 29.3
Cre10.g441100 Chlamydomonas reinhardtii HOM05D005051 ORTHO05D005945 9.3e-50 202.6 713 28.2
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 9.6e-47 192.6 176 61.9
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 7.6e-44 183.0 382 35.6
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 1.0e-43 182.6 145 69.7
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.4e-42 178.7 264 42.8
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 7.1e-42 176.4 121 72.7
TPR.G17133 Trifolium pratense HOM05D005051 ORTHO05D005945 1.8e-40 171.8 145 55.2
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 4.1e-37 160.6 170 53.5
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 2.6e-36 157.9 140 62.1
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 3.2e-34 151.0 107 68.2
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.3e-32 145.6 283 35.7
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 6.3e-30 136.7 325 29.8
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.3e-27 129.0 245 36.7
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.3e-27 129.0 245 36.7
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.3e-27 129.0 245 36.7
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.8e-27 127.5 245 36.3
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.8e-27 127.5 245 36.3
unitig_899.g15018 Utricularia gibba HOM05D003904 ORTHO05D004378 1.4e-26 125.6 107 68.2
Glyma.13G258850 Glycine max HOM05D005051 ORTHO05D005945 2.3e-24 118.2 195 39.0
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 4.8e-22 110.5 187 40.6
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 8.2e-22 109.8 187 40.6
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.1e-21 109.4 187 40.1
Glyma.13G368132 Glycine max HOM05D005051 ORTHO05D005945 4.1e-21 107.5 140 42.9
Glyma.13G258901 Glycine max HOM05D005051 ORTHO05D005945 5.3e-21 107.1 72 76.4
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 5.3e-21 107.1 153 43.1
Glyma.13G368066 Glycine max HOM05D005051 ORTHO05D005945 4.5e-20 104.0 72 75.0
Lsat_1_v5_gn_5_150541 Lactuca sativa HOM05D005051 ORTHO05D048368 1.5e-10 72.4 67 53.7
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 3.2e-10 71.2 50 62.0
Lsat_1_v5_gn_5_28021 Lactuca sativa HOM05D001978 ORTHO05D048368 1.2e-09 69.3 67 50.7
Medtr6g061110 Medicago truncatula HOM05D005051 ORTHO05D000004 8.0e-09 66.6 40 72.5


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