Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 3.1e-88 328.6 181 100.0
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 2.7e-68 262.3 178 74.7
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 3.7e-33 145.6 182 52.7
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 1.1e-32 144.1 149 53.0
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 3.9e-30 135.6 99 60.6
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 1.1e-29 134.0 138 55.1
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 1.5e-29 133.7 99 59.6
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 2.5e-29 132.9 102 56.9
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 3.3e-29 132.5 130 53.1
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 4.3e-29 132.1 112 58.9
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 4.3e-29 132.1 108 57.4
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 5.6e-29 131.7 99 62.6
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.2e-28 130.6 147 48.3
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.6e-28 130.2 102 67.6
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 2.1e-28 129.8 100 68.0
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 2.1e-28 129.8 100 60.0
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 2.8e-28 129.4 123 52.0
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 3.6e-28 129.0 105 65.7
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 6.2e-28 128.3 103 54.4
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 6.2e-28 128.3 103 54.4
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 6.2e-28 128.3 95 72.6
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 6.2e-28 128.3 131 56.5
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 8.0e-28 127.9 108 71.3
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.1e-27 127.5 103 54.4
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 1.8e-27 126.7 100 67.0
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 1.8e-27 126.7 140 56.4
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 1.8e-27 126.7 131 55.0
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 3.1e-27 125.9 114 64.0
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 8.9e-27 124.4 151 52.3
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 1.2e-26 124.0 121 57.9
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 1.2e-26 124.0 99 58.6
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 1.5e-26 123.6 102 65.7
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 2.6e-26 122.9 101 54.5
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 4.4e-26 122.1 154 48.1
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 4.4e-26 122.1 114 61.4
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 5.8e-26 121.7 95 69.5
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 5.8e-26 121.7 102 55.9
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 1.3e-25 120.6 94 66.0
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 1.7e-25 120.2 95 60.0
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 2.9e-25 119.4 119 63.9
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 6.4e-25 118.2 94 63.8
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 1.4e-24 117.1 131 55.0
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 2.4e-24 116.3 99 63.6
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 4.1e-24 115.5 94 67.0
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 4.1e-24 115.5 102 53.9
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 5.4e-24 115.2 100 63.0
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.6e-23 113.6 95 62.1
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 2.1e-23 113.2 112 46.4
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 2.1e-23 113.2 152 55.3
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 3.5e-23 112.5 111 55.9
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 4.6e-23 112.1 125 52.8
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 4.6e-23 112.1 151 52.3
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 5.1e-22 108.6 102 57.8
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 1.9e-21 106.7 141 41.1
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 3.3e-21 105.9 133 43.6
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 5.6e-21 105.1 70 64.3
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 7.3e-21 104.8 101 56.4
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 1.2e-20 104.0 129 56.6
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 1.6e-20 103.6 120 60.8
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 2.1e-20 103.2 113 44.2
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 2.1e-20 103.2 140 45.0
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 2.8e-20 102.8 106 63.2
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 1.1e-19 100.9 106 59.4
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 1.1e-19 100.9 96 55.2
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 1.4e-19 100.5 117 50.4
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 6.8e-19 98.2 106 61.3
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 6.8e-19 98.2 122 54.1
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 8.9e-19 97.8 100 64.0
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 1.2e-18 97.4 82 54.9
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 2.0e-18 96.7 118 55.9
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 2.6e-18 96.3 100 56.0
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 2.6e-18 96.3 99 64.6
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 4.4e-18 95.5 107 61.7
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 4.4e-18 95.5 107 61.7
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 4.4e-18 95.5 96 55.2
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 2.2e-17 93.2 120 55.8
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 2.2e-17 93.2 64 64.1
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 3.7e-17 92.4 108 58.3
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 4.9e-17 92.0 86 60.5
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 2.1e-15 86.7 88 55.7
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 3.9e-14 82.4 84 50.0
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 1.2e-12 77.4 88 56.8
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 3.6e-12 75.9 65 60.0
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 3.6e-12 75.9 92 51.1
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 1.1e-11 74.3 100 59.0
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 1.4e-11 73.9 93 52.7
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 1.8e-11 73.6 67 53.7
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 8.9e-11 71.2 47 63.8
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 2.1e-07 60.1 36 69.4


User provided reference genes

Program Settings