Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.9e-99 365.9 194 100.0
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 2.5e-88 328.9 194 90.7
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.2e-74 283.5 195 82.6
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 6.1e-66 254.6 196 73.0
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.5e-61 238.8 212 66.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.0e-60 237.3 162 76.5
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.5e-59 233.4 212 66.5
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.5e-59 233.4 195 69.2
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 1.6e-58 229.9 224 60.7
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 4.0e-57 225.3 200 66.0
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 5.2e-57 224.9 192 63.0
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 6.8e-57 224.6 201 64.7
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 1.5e-56 223.4 201 63.2
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 7.5e-56 221.1 223 59.6
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 9.8e-56 220.7 200 62.5
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 9.8e-56 220.7 200 62.5
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.3e-55 220.3 200 62.0
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 1.3e-55 220.3 217 59.0
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 1.3e-55 220.3 159 73.0
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.7e-55 219.9 201 64.2
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.2e-55 219.5 193 66.8
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.8e-55 219.2 194 66.5
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 2.8e-55 219.2 160 73.8
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 3.7e-55 218.8 196 62.2
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 8.3e-55 217.6 205 63.9
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 8.3e-55 217.6 179 65.9
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 8.3e-55 217.6 193 62.2
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.2e-53 213.8 204 62.7
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.6e-53 213.4 162 70.4
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 2.0e-53 213.0 224 56.2
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 2.7e-53 212.6 215 59.1
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 2.7e-53 212.6 193 64.2
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 2.7e-53 212.6 195 57.9
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 3.5e-53 212.2 196 60.2
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 4.5e-53 211.8 215 60.9
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 5.9e-53 211.5 162 69.8
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 5.9e-53 211.5 215 60.5
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 7.7e-53 211.1 196 59.2
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.7e-52 209.9 204 61.3
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 2.9e-52 209.1 206 62.1
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 5.0e-52 208.4 194 63.9
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 8.6e-52 207.6 208 59.6
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.1e-51 207.2 203 60.1
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 2.5e-51 206.1 185 62.2
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 7.3e-51 204.5 202 58.9
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 9.5e-51 204.1 207 59.9
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.2e-50 203.8 150 75.3
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.6e-50 202.2 190 60.0
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 4.7e-50 201.8 168 70.2
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.4e-49 200.3 203 60.1
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.8e-49 199.9 195 57.9
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 2.3e-49 199.5 211 56.9
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.0e-49 198.7 163 65.6
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 5.2e-49 198.4 166 68.7
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 8.9e-49 197.6 197 58.9
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 1.2e-48 197.2 210 57.6
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 2.0e-48 196.4 203 58.1
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.4e-48 195.7 159 67.9
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.4e-48 195.7 163 68.7
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 4.4e-48 195.3 155 67.1
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 5.7e-48 194.9 195 57.4
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.3e-47 193.7 169 68.0
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 2.9e-47 192.6 158 67.1
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 3.7e-47 192.2 167 64.7
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 3.7e-47 192.2 205 60.0
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 8.3e-47 191.0 161 65.2
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 1.4e-46 190.3 207 56.5
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.4e-46 190.3 168 65.5
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.8e-46 189.9 169 60.4
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 2.4e-46 189.5 158 67.7
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 2.4e-46 189.5 206 57.8
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 3.2e-46 189.1 196 56.1
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.1e-46 188.7 169 62.1
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 7.0e-46 188.0 169 61.5
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 7.0e-46 188.0 169 61.5
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 9.2e-46 187.6 169 61.5
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 9.2e-46 187.6 169 61.5
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 2.0e-45 186.4 171 61.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 2.7e-45 186.0 205 58.0
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 3.5e-45 185.7 169 60.9
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 4.6e-45 185.3 109 83.5
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 5.9e-45 184.9 162 62.3
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.0e-44 184.1 165 61.8
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 2.3e-44 183.0 159 63.5
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 3.9e-44 182.2 192 56.8
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 5.0e-44 181.8 193 55.4
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 6.6e-44 181.4 202 53.5
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 2.5e-43 179.5 199 56.8
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 5.6e-43 178.3 158 60.1
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 9.5e-43 177.6 208 51.9
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 2.8e-42 176.0 204 53.4
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.0e-41 174.1 199 52.8
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 5.2e-41 171.8 108 78.7
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 6.8e-41 171.4 177 54.2
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 8.9e-41 171.0 202 53.0
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 3.4e-40 169.1 148 58.1
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 9.8e-40 167.5 126 67.5
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.3e-39 167.2 216 50.5
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.3e-39 167.2 195 54.9
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.2e-37 160.6 173 52.6
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 2.0e-37 159.8 103 76.7
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 2.7e-37 159.5 155 54.2
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 1.0e-36 157.5 105 67.6
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.3e-35 151.4 229 47.6
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.6e-34 150.2 85 80.0
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 3.7e-31 139.0 132 60.6
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 3.2e-30 136.0 141 53.9
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 1.7e-28 130.2 125 52.0
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 3.4e-24 115.9 116 50.0
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 4.4e-24 115.5 101 54.5
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 3.8e-23 112.5 160 47.5
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 1.2e-21 107.5 105 50.5
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 2.1e-21 106.7 154 50.0
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 8.9e-17 91.3 135 52.6
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 5.4e-14 82.0 72 54.2
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.4e-14 82.0 131 45.0
Hund02819 Selenicereus undatus HOM05D000190 ORTHO05D000113 1.4e-06 57.4 35 77.1
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 5.4e-06 55.5 39 64.1


User provided reference genes

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