Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.2e-61 239.6 119 100.0
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 3.6e-53 211.5 120 88.3
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 6.6e-47 190.7 119 79.8
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 3.6e-45 184.9 120 78.3
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 3.6e-45 184.9 120 78.3
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 4.8e-45 184.5 119 79.0
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 6.2e-45 184.1 120 78.3
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 6.2e-45 184.1 120 79.2
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 6.9e-44 180.6 119 77.3
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 9.0e-44 180.3 120 77.5
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 5.8e-43 177.6 118 73.7
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.3e-42 176.4 114 75.4
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 2.2e-42 175.6 119 72.3
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 3.8e-42 174.9 120 75.0
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 1.1e-41 173.3 119 74.8
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.4e-41 172.2 118 72.0
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 4.2e-41 171.4 115 75.7
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 6.0e-40 167.5 124 71.8
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.3e-39 166.4 119 72.3
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.9e-39 164.9 119 73.1
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 5.1e-39 164.5 119 69.7
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 5.1e-39 164.5 122 69.7
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 6.7e-39 164.1 119 72.3
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 8.7e-39 163.7 119 72.3
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 8.7e-39 163.7 119 72.3
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 8.7e-39 163.7 119 72.3
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 1.5e-38 162.9 124 71.0
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 5.6e-38 161.0 124 71.0
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 7.4e-38 160.6 123 71.5
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.6e-37 159.5 119 73.1
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.8e-37 158.7 126 67.5
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 4.8e-37 157.9 125 68.0
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 4.8e-37 157.9 120 68.3
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 4.8e-37 157.9 129 65.1
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 4.8e-37 157.9 122 69.7
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 8.1e-37 157.1 130 64.6
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.1e-36 156.8 121 72.7
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 1.4e-36 156.4 119 68.9
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.8e-36 156.0 126 68.3
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.8e-36 156.0 126 68.3
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 2.4e-36 155.6 126 66.7
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 2.4e-36 155.6 121 68.6
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 4.0e-36 154.8 126 66.7
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 4.0e-36 154.8 125 66.4
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 4.0e-36 154.8 125 66.4
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 9.0e-36 153.7 123 68.3
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 9.0e-36 153.7 125 66.4
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 9.0e-36 153.7 119 69.7
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 2.0e-35 152.5 112 68.8
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.0e-35 152.5 121 69.4
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.6e-35 152.1 126 67.5
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 2.6e-35 152.1 124 64.5
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.6e-35 152.1 120 68.3
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 3.4e-35 151.8 120 69.2
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 3.4e-35 151.8 121 67.8
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 4.5e-35 151.4 120 68.3
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 5.8e-35 151.0 131 64.1
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 1.0e-34 150.2 130 67.7
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.3e-34 149.8 123 67.5
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.3e-34 149.8 119 67.2
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.7e-34 149.4 127 62.2
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 2.2e-34 149.1 123 67.5
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 2.9e-34 148.7 126 66.7
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.9e-34 148.7 118 68.6
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 4.9e-34 147.9 119 68.1
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 6.5e-34 147.5 120 65.8
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.2e-32 143.3 117 65.0
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 3.5e-32 141.7 127 59.8
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 3.5e-32 141.7 90 75.6
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 6.0e-32 141.0 116 62.9
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 7.9e-32 140.6 120 65.8
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.0e-31 140.2 126 68.3
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 2.3e-31 139.0 120 60.0
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 6.7e-31 137.5 119 61.3
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 8.7e-31 137.1 111 66.7
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 8.7e-31 137.1 70 91.4
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 1.1e-30 136.7 113 62.8
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 1.9e-30 136.0 162 46.9
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 4.3e-30 134.8 68 89.7
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 5.7e-30 134.4 131 59.5
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 7.4e-30 134.0 123 61.0
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 7.4e-30 134.0 118 61.0
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 4.8e-29 131.3 118 60.2
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 4.8e-29 131.3 73 87.7
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 6.2e-29 131.0 74 87.8
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 2.4e-28 129.0 79 77.2
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 6.9e-28 127.5 119 60.5
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 1.2e-27 126.7 128 58.6
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 7.2e-25 117.5 124 53.2
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 3.0e-23 112.1 72 76.4
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 3.0e-23 112.1 107 56.1
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 6.7e-23 110.9 69 72.5
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 7.4e-22 107.5 69 69.6
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 1.8e-20 102.8 49 95.9
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.5e-19 99.8 124 49.2
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 1.4e-15 86.7 57 64.9
COL.COLO4_33329 Corchorus olitorius HOM05D007442 ORTHO05D009284 6.7e-15 84.3 77 63.6
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 3.3e-14 82.0 52 67.3
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.5e-11 73.2 85 47.1
Atru.chr6.3394 Acer truncatum HOM05D007442 ORTHO05D009284 3.4e-11 72.0 77 55.8
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 1.9e-09 66.2 76 55.3
CSS0040675 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 2.1e-08 62.8 72 51.4
AT2G05310 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 8.8e-07 57.4 78 47.4


User provided reference genes

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