Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.6e-66 255.4 140 100.0
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 3.1e-59 231.9 140 88.6
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 3.4e-26 122.1 141 59.6
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 5.8e-26 121.3 140 58.6
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 2.2e-25 119.4 142 59.9
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 6.4e-25 117.9 141 56.7
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 3.0e-22 109.0 143 54.5
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 6.7e-22 107.8 144 54.9
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 3.3e-21 105.5 140 54.3
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 1.6e-20 103.2 149 51.7
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 2.8e-20 102.4 146 49.3
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 2.4e-19 99.4 142 45.1
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 6.9e-19 97.8 141 52.5
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.0e-18 96.3 141 51.8
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 2.0e-18 96.3 141 51.8
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 2.0e-18 96.3 142 48.6
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 2.9e-17 92.4 141 44.0
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 3.8e-17 92.0 141 46.1
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 6.5e-17 91.3 141 46.1
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 8.4e-17 90.9 139 46.0
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 1.1e-16 90.5 141 45.4
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 2.5e-16 89.4 141 44.7
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 7.1e-16 87.8 141 44.7
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 1.2e-15 87.0 140 42.1
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.3e-14 83.6 142 43.0
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 6.7e-14 81.3 147 40.8
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 8.7e-14 80.9 143 44.8
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 8.7e-14 80.9 140 45.7
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.1e-13 80.5 142 43.0
CSS0019001 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.5e-13 80.1 140 41.4
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 5.7e-13 78.2 141 43.3
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 9.6e-13 77.4 144 44.4
Cc02_g34950 Coffea canephora HOM05D004793 ORTHO05D004423 1.6e-12 76.6 150 41.3
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.1e-12 76.3 141 44.0
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.1e-12 76.3 141 44.0
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 4.8e-12 75.1 142 39.4
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 1.1e-11 73.9 144 41.0
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 1.1e-11 73.9 140 44.3
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 1.1e-11 73.9 140 44.3
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 1.1e-11 73.9 140 45.7
DCAR_019706 Daucus carota HOM05D004793 ORTHO05D004423 3.1e-11 72.4 143 39.9
Glyma.02G305500 Glycine max HOM05D004793 ORTHO05D004423 5.3e-11 71.6 145 42.1
VMungo0647G0475 Vigna mungo HOM05D004793 ORTHO05D004423 6.9e-11 71.2 141 36.2
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 2.0e-10 69.7 146 41.8
Rhsim13G0143200 Rhododendron simsii HOM05D004793 ORTHO05D004423 2.0e-10 69.7 145 37.2
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 2.6e-10 69.3 145 40.0
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 3.4e-10 68.9 143 39.2
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 5.9e-10 68.2 143 37.1
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 1.0e-09 67.4 140 37.9
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 1.0e-09 67.4 146 40.4
Phvul.008G285200 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 1.7e-09 66.6 141 37.6
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.9e-09 65.9 140 40.7
Gorai.001G099200 Gossypium raimondii HOM05D004793 ORTHO05D004423 3.8e-09 65.5 141 39.7
MSTRG.7149 Avicennia marina HOM05D004793 ORTHO05D004423 5.0e-09 65.1 145 42.1
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 5.0e-09 65.1 145 35.9
Gohir.D07G092600 Gossypium hirsutum HOM05D004793 ORTHO05D004423 6.5e-09 64.7 141 39.7
Prupe.4G007200 Prunus persica HOM05D004793 ORTHO05D004423 6.5e-09 64.7 162 34.0
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 8.5e-09 64.3 141 36.9
CiPaw.09G105400 Carya illinoinensis HOM05D004793 ORTHO05D004423 8.5e-09 64.3 160 35.6
Gohir.A07G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 8.5e-09 64.3 141 39.7
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 8.5e-09 64.3 145 37.2
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 8.5e-09 64.3 143 35.0
Migut.M00035 Erythranthe guttata HOM05D004793 ORTHO05D004423 1.1e-08 63.9 141 36.2
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 2.5e-08 62.8 144 36.1
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 2.5e-08 62.8 148 33.8
CAN.G1397.7 Capsicum annuum HOM05D037802 ORTHO05D004423 3.2e-08 62.4 143 38.5
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 3.2e-08 62.4 148 38.5
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 3.2e-08 62.4 148 38.5
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 4.2e-08 62.0 141 38.3
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 5.5e-08 61.6 141 37.6
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 5.5e-08 61.6 142 31.7
Lsat_1_v5_gn_7_13860 Lactuca sativa HOM05D004793 ORTHO05D004423 5.5e-08 61.6 156 34.6
QL05p068872 Quercus lobata HOM05D004793 ORTHO05D004423 5.5e-08 61.6 142 34.5
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 7.2e-08 61.2 141 32.6
TPR.G6007 Trifolium pratense HOM05D004793 ORTHO05D004423 7.2e-08 61.2 151 36.4
Oeu029974.1 Olea europaea HOM05D027131 ORTHO05D013900 9.3e-08 60.8 41 73.2
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 9.3e-08 60.8 140 36.4
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 1.2e-07 60.5 145 37.2
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 1.2e-07 60.5 147 32.0
ClCG02G002720 Citrullus lanatus HOM05D000222 ORTHO05D003997 1.6e-07 60.1 119 38.7
Actinidia21442 Actinidia chinensis HOM05D004793 ORTHO05D004423 2.1e-07 59.7 92 47.8
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 2.1e-07 59.7 140 36.4
QL05p068371 Quercus lobata HOM05D004793 ORTHO05D004423 3.6e-07 58.9 142 33.8
Haze_12687 Corylus avellana HOM05D004793 ORTHO05D004423 4.6e-07 58.5 145 42.1
Lj2P260T34 Lonicera japonica HOM05D004793 ORTHO05D004423 4.6e-07 58.5 157 37.6
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 4.6e-07 58.5 146 32.2
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 6.1e-07 58.2 140 37.9
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 6.1e-07 58.2 140 36.4
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 6.1e-07 58.2 140 35.0
CsaV3_7G023710 Cucumis sativus L. HOM05D004793 ORTHO05D004423 6.1e-07 58.2 96 42.7
DCAR_030858 Daucus carota HOM05D004793 ORTHO05D004423 7.9e-07 57.8 138 35.5
Prupe.4G234900 Prunus persica HOM05D004793 ORTHO05D004423 7.9e-07 57.8 141 35.5
Cc09_g04750 Coffea canephora HOM05D004793 ORTHO05D004423 1.0e-06 57.4 141 36.2
MELO3C024110.2 Cucumis melo HOM05D004793 ORTHO05D004423 1.0e-06 57.4 144 36.1
ECA234G3783 Erigeron canadensis HOM05D004793 ORTHO05D004423 1.0e-06 57.4 165 38.2
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 1.8e-06 56.6 140 36.4
Rhsim04G0038500 Rhododendron simsii HOM05D004793 ORTHO05D004423 2.3e-06 56.2 145 37.9
RcHm_v2.0_Chr5g0000811 Rosa chinensis HOM05D020126 ORTHO05D004423 2.3e-06 56.2 155 31.6
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 3.0e-06 55.8 141 34.0
SalBow7G3719 Salvia bowleyana HOM05D004793 ORTHO05D004423 3.0e-06 55.8 141 37.6
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 3.9e-06 55.5 147 34.7
Oeu063642.1 Olea europaea HOM05D004793 ORTHO05D004423 3.9e-06 55.5 140 37.1
CANSAT56G2188 Cannabis sativa HOM05D004793 ORTHO05D004423 5.1e-06 55.1 154 33.1
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 6.7e-06 54.7 144 33.3
CAN.G696.14 Capsicum annuum HOM05D018828 ORTHO05D004423 8.7e-06 54.3 136 33.8
Psat4g002280 Pisum sativum HOM05D004793 ORTHO05D004423 8.7e-06 54.3 141 31.2
Potri.011G086300 Populus trichocarpa HOM05D004793 ORTHO05D004423 8.7e-06 54.3 107 40.2
Sopen07g024260 Solanum pennellii HOM05D037802 ORTHO05D004423 8.7e-06 54.3 127 37.0
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 8.7e-06 54.3 142 36.6


User provided reference genes

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