Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 4.9e-296 1020.4 521 100.0
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 1.1e-255 886.3 521 86.8
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 5.7e-252 874.0 521 85.8
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 2.3e-229 798.9 523 79.5
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 8.3e-219 763.8 522 75.7
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 1.0e-216 756.9 525 75.8
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.9e-215 752.7 525 75.2
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.6e-214 749.6 525 74.9
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 1.8e-213 746.1 523 73.4
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 1.2e-212 743.4 525 74.3
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 2.1e-209 732.6 525 73.0
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 6.6e-208 727.6 524 72.5
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 8.6e-208 727.2 522 70.9
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 2.5e-207 725.7 518 72.8
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 9.9e-204 713.8 523 71.5
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 3.8e-203 711.8 523 72.5
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 3.8e-203 711.8 519 72.4
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 1.4e-202 709.9 522 70.5
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 1.9e-202 709.5 523 70.9
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.9e-202 709.5 518 71.0
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 1.3e-200 703.4 526 70.3
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 5.6e-199 698.0 526 68.6
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 2.4e-197 692.6 519 72.1
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 5.3e-197 691.4 530 68.3
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 4.9e-195 684.9 522 68.8
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 1.2e-193 680.2 522 66.5
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.6e-193 679.9 524 67.9
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 3.9e-192 675.2 522 69.2
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 4.3e-191 671.8 525 67.8
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 6.2e-190 667.9 526 65.6
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 6.2e-190 667.9 523 68.8
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 2.4e-189 666.0 536 67.4
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 9.0e-189 664.1 529 67.3
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 1.2e-188 663.7 523 66.2
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 1.2e-188 663.7 522 66.5
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 1.5e-188 663.3 524 68.7
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 4.5e-188 661.8 530 66.0
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 5.8e-188 661.4 524 67.2
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 7.6e-188 661.0 528 66.1
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 9.9e-188 660.6 526 66.0
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 9.9e-188 660.6 528 66.3
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 1.7e-187 659.8 528 65.9
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 1.4e-186 656.8 522 66.9
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 1.9e-186 656.4 526 67.9
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 3.2e-186 655.6 528 66.9
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 4.2e-186 655.2 513 66.3
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 5.4e-186 654.8 512 65.6
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 5.4e-186 654.8 530 66.6
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 1.6e-185 653.3 523 67.3
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 2.7e-185 652.5 524 66.2
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 1.3e-184 650.2 513 66.1
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 1.8e-184 649.8 523 66.3
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 5.1e-184 648.3 527 64.5
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 6.7e-184 647.9 523 66.0
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 6.7e-184 647.9 523 65.2
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 8.7e-184 647.5 521 65.8
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 5.6e-183 644.8 512 65.0
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 7.4e-183 644.4 519 67.8
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 7.4e-183 644.4 522 66.3
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 7.4e-183 644.4 521 66.0
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 1.3e-182 643.7 524 66.2
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 1.6e-182 643.3 529 65.4
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 4.8e-182 641.7 533 64.0
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 8.1e-182 641.0 520 65.0
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 8.1e-182 641.0 523 67.1
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 1.8e-181 639.8 525 66.1
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 1.2e-180 637.1 526 66.0
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 1.5e-180 636.7 518 65.4
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.0e-180 636.3 525 66.5
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 3.4e-180 635.6 530 63.2
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 7.6e-180 634.4 526 65.8
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 1.3e-179 633.6 513 64.7
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.3e-179 633.6 526 65.8
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 6.4e-179 631.3 515 65.0
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 1.9e-178 629.8 523 64.4
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 1.6e-177 626.7 525 63.0
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 4.6e-177 625.2 514 65.4
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 7.9e-177 624.4 536 64.0
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 3.9e-176 622.1 525 63.0
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 2.1e-174 616.3 528 63.6
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 2.8e-174 615.9 538 62.5
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 3.7e-174 615.5 525 64.4
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 1.8e-173 613.2 523 64.1
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 1.2e-172 610.5 525 63.2
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 1.7e-171 606.7 519 64.5
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 8.4e-171 604.4 531 60.8
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 5.5e-170 601.7 521 63.1
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 5.5e-170 601.7 513 64.1
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 7.1e-170 601.3 531 60.6
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 1.2e-169 600.5 513 63.9
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.7e-169 599.4 525 63.4
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 3.5e-169 599.0 534 61.4
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 4.6e-169 598.6 528 61.2
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 2.3e-168 596.3 519 63.6
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 7.4e-167 591.3 529 61.2
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 1.1e-165 587.4 482 64.7
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 1.9e-162 576.6 472 63.3
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 5.5e-162 575.1 533 60.0
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 2.3e-160 569.7 505 60.2
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 1.1e-157 560.8 532 58.3
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 2.0e-156 556.6 536 58.2
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 3.2e-154 549.3 536 57.8
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 1.0e-152 544.3 468 62.2
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 3.5e-148 529.3 534 55.6
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 5.9e-148 528.5 525 58.9
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 4.5e-140 502.3 529 54.1
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 1.0e-139 501.1 529 54.3
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 2.5e-138 496.5 513 57.5
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 1.6e-137 493.8 529 53.3
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 1.2e-135 487.6 491 55.8
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 2.8e-134 483.0 540 52.0
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 2.1e-121 440.3 542 49.4
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 2.8e-121 439.9 525 51.4
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 8.0e-121 438.3 547 49.4
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 3.5e-116 422.9 305 67.9
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 1.2e-105 387.9 521 45.9
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 5.8e-103 379.0 300 67.0
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 7.6e-95 352.1 520 46.0
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 2.2e-86 323.9 592 38.9
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 1.0e-62 245.4 284 49.6
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 1.8e-51 208.0 350 38.3
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 2.3e-51 207.6 201 59.7
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 2.2e-38 164.5 288 39.2
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 4.8e-25 120.2 99 65.7
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.4e-24 118.6 83 68.7
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 2.0e-23 114.8 483 26.9
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 5.5e-21 106.7 529 26.1
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 1.2e-20 105.5 70 74.3
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 3.1e-16 90.9 65 67.7
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 1.7e-14 85.1 64 60.9
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 3.8e-14 84.0 63 63.5
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 4.4e-10 70.5 486 23.5
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 7.0e-08 63.2 81 50.6
PRCOL_00002377 Prasinoderma coloniale HOM05D005917 ORTHO05D333437 4.5e-07 60.5 349 22.9


User provided reference genes

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