Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 1.1e-139 500.0 256 100.0
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 5.3e-126 454.5 256 92.2
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 8.0e-106 387.5 256 79.3
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 3.0e-105 385.6 256 78.5
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 3.8e-100 368.6 256 72.7
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 3.6e-98 362.1 256 72.3
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 6.1e-98 361.3 250 73.6
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 8.8e-97 357.5 263 70.7
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 1.3e-95 353.6 256 70.7
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 2.2e-95 352.8 257 70.0
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 3.7e-95 352.1 256 70.3
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 4.8e-95 351.7 256 69.1
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 7.7e-93 344.4 255 71.8
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 2.3e-92 342.8 255 67.5
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 1.5e-91 340.1 258 68.2
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 2.5e-91 339.3 256 67.2
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 1.0e-89 334.0 260 67.3
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 4.0e-89 332.0 277 62.8
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 4.0e-89 332.0 258 66.3
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 8.9e-89 330.9 257 68.5
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 8.9e-89 330.9 260 67.7
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 8.9e-89 330.9 258 65.1
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 2.6e-88 329.3 256 66.0
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 2.6e-88 329.3 257 68.5
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 3.4e-88 328.9 255 66.7
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 3.4e-88 328.9 255 64.7
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 7.5e-88 327.8 259 66.0
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 7.5e-88 327.8 256 64.5
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 1.3e-87 327.0 257 68.5
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 1.7e-87 326.6 256 67.2
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 2.2e-87 326.2 260 66.2
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 2.8e-87 325.9 260 65.0
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 2.8e-87 325.9 255 67.1
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 3.7e-87 325.5 257 65.0
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 1.4e-86 323.6 260 65.4
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 2.4e-86 322.8 255 65.5
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 3.1e-86 322.4 268 64.2
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 4.1e-86 322.0 257 66.5
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 5.4e-86 321.6 257 64.6
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 9.2e-86 320.9 262 63.7
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 1.2e-85 320.5 259 63.7
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.6e-85 320.1 256 66.0
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.6e-85 320.1 258 67.1
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 2.7e-85 319.3 253 66.0
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 2.7e-85 319.3 258 65.9
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 4.5e-85 318.5 258 67.1
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 7.8e-85 317.8 257 65.0
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 1.3e-84 317.0 258 66.7
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 2.3e-84 316.2 257 64.6
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 2.5e-83 312.8 260 63.5
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 3.3e-83 312.4 257 61.9
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 9.5e-83 310.8 255 63.5
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 9.5e-83 310.8 261 64.4
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 3.6e-82 308.9 280 59.6
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 6.1e-82 308.1 260 63.5
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 6.1e-82 308.1 284 60.2
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 8.0e-82 307.8 257 64.6
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.8e-81 306.6 262 64.9
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 8.9e-81 304.3 259 59.5
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 1.5e-80 303.5 259 61.4
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 2.6e-80 302.8 270 60.0
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 5.8e-80 301.6 282 58.9
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 1.7e-79 300.1 259 62.2
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 6.4e-79 298.1 270 59.3
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 8.3e-79 297.7 255 61.6
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 8.3e-79 297.7 266 58.6
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 8.3e-79 297.7 258 61.6
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 1.1e-78 297.4 257 61.9
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 2.4e-78 296.2 258 61.2
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 3.2e-78 295.8 260 61.2
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 9.2e-78 294.3 257 59.9
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 1.6e-77 293.5 267 59.2
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 2.0e-77 293.1 260 58.5
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 2.7e-77 292.7 260 60.8
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 4.6e-77 292.0 258 60.5
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.3e-76 290.4 214 67.8
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 3.0e-76 289.3 257 59.9
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 3.9e-76 288.9 262 58.0
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 5.0e-76 288.5 254 59.1
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 2.5e-75 286.2 263 61.2
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 1.6e-74 283.5 255 58.8
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 3.6e-74 282.3 256 59.4
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 3.1e-73 279.3 248 60.9
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 1.7e-71 273.5 255 55.7
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 2.2e-71 273.1 303 51.5
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 2.2e-71 273.1 258 57.0
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 2.1e-69 266.5 259 56.8
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 1.9e-67 260.0 213 66.7
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 3.1e-65 252.7 262 56.1
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 1.2e-64 250.8 259 52.5
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 6.4e-63 245.0 254 51.2
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 2.4e-62 243.0 256 53.5
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.6e-61 240.4 258 56.2
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 1.5e-59 233.8 160 77.5
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.5e-59 233.8 194 66.5
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 6.2e-58 228.4 248 51.6
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 1.4e-57 227.3 257 48.6
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 2.6e-48 196.4 158 61.4
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 4.9e-47 192.2 248 47.2
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 3.2e-38 162.9 170 51.2
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 9.0e-33 144.8 251 39.8
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 8.4e-31 138.3 148 56.1
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 1.9e-30 137.1 243 41.2
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 1.3e-23 114.4 126 55.6
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 4.1e-17 92.8 92 47.8
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 1.2e-16 91.3 63 61.9
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 1.4e-14 84.3 221 30.8
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 1.9e-14 84.0 221 31.2
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 6.9e-09 65.5 98 40.8
HPP92_017340 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.3e-07 61.2 87 47.1
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 2.5e-06 57.0 44 56.8


User provided reference genes

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