Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 5.7e-117 424.5 246 100.0
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 3.9e-94 348.6 255 75.7
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 3.6e-71 272.3 174 81.6
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 8.0e-71 271.2 234 62.0
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 1.4e-70 270.4 240 63.3
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 8.8e-70 267.7 174 78.7
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.7e-68 263.5 177 74.6
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 3.7e-68 262.3 176 73.9
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 3.1e-67 259.2 249 60.6
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 9.2e-67 257.7 239 65.3
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 1.2e-66 257.3 179 72.1
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 2.0e-66 256.5 177 71.8
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 2.7e-66 256.1 177 72.9
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 3.5e-66 255.8 177 75.1
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 5.9e-66 255.0 244 65.6
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 7.7e-66 254.6 234 62.4
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 1.3e-65 253.8 176 71.6
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.9e-65 252.7 177 71.2
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 6.6e-65 251.5 233 60.9
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 1.5e-64 250.4 177 71.8
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.9e-64 250.0 179 70.9
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.2e-63 247.3 175 70.3
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.1e-63 246.5 237 59.1
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.8e-63 246.1 175 69.7
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 3.6e-63 245.7 239 63.2
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 4.7e-63 245.4 175 71.4
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 8.0e-63 244.6 179 68.2
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.4e-62 243.8 239 59.4
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 2.3e-62 243.0 181 66.3
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 2.3e-62 243.0 181 66.9
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 2.3e-62 243.0 176 72.2
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 3.0e-62 242.7 239 62.8
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 3.0e-62 242.7 176 71.6
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 2.0e-61 240.0 177 68.9
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.0e-61 240.0 179 67.6
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 2.6e-61 239.6 231 57.6
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.4e-61 239.2 231 57.6
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 3.4e-61 239.2 191 68.1
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 5.7e-61 238.4 172 69.8
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 5.7e-61 238.4 225 58.7
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 7.5e-61 238.0 223 59.2
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 7.5e-61 238.0 179 65.9
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 7.5e-61 238.0 179 65.9
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 7.5e-61 238.0 217 58.1
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 1.3e-60 237.3 181 64.6
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 1.3e-60 237.3 181 64.6
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.3e-60 237.3 176 68.2
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 2.9e-60 236.1 231 57.6
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 6.4e-60 235.0 179 64.8
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 6.4e-60 235.0 237 57.4
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.1e-59 234.2 176 67.6
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 1.1e-59 234.2 173 69.4
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 1.1e-59 234.2 233 57.1
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 1.4e-59 233.8 249 53.8
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.8e-59 233.4 229 55.0
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 2.4e-59 233.0 239 56.1
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 3.2e-59 232.6 237 57.0
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 4.1e-59 232.3 231 57.1
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 1.6e-58 230.3 236 53.4
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 1.6e-58 230.3 234 57.7
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 4.6e-58 228.8 177 67.2
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 4.6e-58 228.8 225 54.2
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 4.6e-58 228.8 175 67.4
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 1.0e-57 227.6 236 55.1
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 2.3e-57 226.5 179 65.9
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 2.3e-57 226.5 236 54.7
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.0e-57 226.1 243 55.6
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 3.0e-57 226.1 233 59.2
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 3.0e-57 226.1 184 63.6
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 6.6e-57 224.9 176 66.5
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.9e-56 223.4 201 60.2
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 1.9e-56 223.4 179 63.1
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 4.3e-56 222.2 178 64.6
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 1.2e-55 220.7 177 66.1
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 2.8e-55 219.5 246 56.5
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 4.7e-55 218.8 175 64.6
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.0e-54 217.6 179 62.6
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 1.0e-54 217.6 228 59.6
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 1.4e-54 217.2 180 63.3
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 4.4e-53 212.2 187 57.8
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 7.5e-53 211.5 146 72.6
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 7.5e-53 211.5 188 62.2
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 2.2e-52 209.9 172 62.2
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 6.4e-52 208.4 180 62.2
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 8.3e-52 208.0 233 54.5
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 1.1e-51 207.6 172 61.0
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.1e-51 205.7 175 61.7
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 4.1e-51 205.7 175 62.3
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 7.0e-51 204.9 175 57.7
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 2.0e-50 203.4 172 58.1
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.5e-48 196.4 145 67.6
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 9.5e-48 194.5 147 68.7
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 4.7e-47 192.2 140 67.9
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.1e-46 191.0 140 70.0
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 3.7e-44 182.6 243 47.7
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 4.9e-44 182.2 182 59.3
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 8.3e-44 181.4 231 48.5
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 2.4e-43 179.9 186 58.6
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 7.3e-40 168.3 178 50.0
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.8e-39 166.4 324 40.1
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.1e-38 164.5 123 66.7
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.1e-38 164.5 298 42.3
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.8e-38 163.7 175 52.6
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 3.2e-35 152.9 172 47.7
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 1.0e-33 147.9 123 65.0
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 3.9e-33 146.0 155 52.9
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 6.6e-33 145.2 175 46.9
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 6.6e-33 145.2 128 60.9
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 7.3e-32 141.7 123 60.2
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 3.6e-31 139.4 99 68.7
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 3.6e-31 139.4 177 43.5
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 8.4e-28 128.3 133 50.4
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 1.0e-25 121.3 171 42.1
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.0e-25 121.3 99 57.6
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 6.6e-25 118.6 128 51.6
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.6e-23 112.8 137 51.8
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 6.7e-17 92.0 64 71.9
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 3.3e-16 89.7 55 80.0
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 7.4e-16 88.6 55 78.2
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 7.4e-16 88.6 55 80.0
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 1.4e-14 84.3 55 74.5
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 1.9e-11 73.9 91 44.0
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 2.5e-08 63.5 51 56.9
BcaC01g05263 Brassica carinata HOM05D006222 ORTHO05D007677 5.3e-06 55.8 43 60.5


User provided reference genes

Program Settings