Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G149300 Populus trichocarpa HOM05D004455 ORTHO05D005011 1.7e-70 269.2 139 100.0
Potri.002G235800 Populus trichocarpa HOM05D004455 ORTHO05D005011 9.5e-45 183.7 136 73.5
Sabra02G0179600 Salix brachista HOM05D004455 ORTHO05D005011 2.1e-44 182.6 139 71.2
vmacro20438 Vaccinium macrocarpon HOM05D004455 ORTHO05D005011 8.9e-27 124.0 134 53.0
Rhsim10G0187200 Rhododendron simsii HOM05D004455 ORTHO05D005011 4.4e-26 121.7 109 56.9
Atru.chr3.1769 Acer truncatum HOM05D004455 ORTHO05D005011 7.6e-26 120.9 126 55.6
TWI73G0762 Tripterygium wilfordii HOM05D004455 ORTHO05D005011 9.9e-26 120.6 123 56.1
Ciclev10006584m.g Citrus clementina HOM05D004455 ORTHO05D005011 1.7e-25 119.8 138 54.3
Thecc.04G190600 Theobroma cacao HOM05D004455 ORTHO05D005011 4.9e-25 118.2 128 54.7
CiPaw.01G112400 Carya illinoinensis HOM05D004455 ORTHO05D005011 1.9e-24 116.3 127 50.4
Haze_11689 Corylus avellana HOM05D004455 ORTHO05D005011 1.9e-24 116.3 118 58.5
Gohir.A03G095800 Gossypium hirsutum HOM05D004455 ORTHO05D005011 3.2e-24 115.5 129 51.9
Gohir.D02G113100 Gossypium hirsutum HOM05D004455 ORTHO05D005011 4.1e-24 115.2 129 52.7
Gorai.005G128000 Gossypium raimondii HOM05D004455 ORTHO05D005011 4.1e-24 115.2 129 52.7
TAR362G0523 Trochodendron aralioides HOM05D004455 ORTHO05D005011 4.1e-24 115.2 121 54.5
TAR365G1206 Trochodendron aralioides HOM05D004455 ORTHO05D005011 4.1e-24 115.2 131 53.4
Duzib268G1831 Durio zibethinus HOM05D004455 ORTHO05D005011 5.4e-24 114.8 120 53.3
RcHm_v2.0_Chr4g0412111 Rosa chinensis HOM05D004455 ORTHO05D005011 5.4e-24 114.8 127 52.0
Cfa008670 Carpinus fangiana HOM05D004455 ORTHO05D005011 7.1e-24 114.4 118 58.5
MD04G1023200 Malus domestica HOM05D004455 ORTHO05D005011 9.2e-24 114.0 116 55.2
CsaV3_6G003120 Cucumis sativus L. HOM05D004455 ORTHO05D005011 1.6e-23 113.2 120 53.3
FvH4_4g12780 Fragaria vesca HOM05D004455 ORTHO05D005011 2.1e-23 112.8 134 51.5
FAN12G1054 Fragaria x ananassa HOM05D004455 ORTHO05D005011 2.1e-23 112.8 134 51.5
Atru.chr2.1390 Acer truncatum HOM05D004455 ORTHO05D005011 3.5e-23 112.1 105 60.0
Hma1.2p1_0984F.1_g244250 Hydrangea macrophylla HOM05D004455 ORTHO05D005011 3.5e-23 112.1 121 52.1
FAN07G1022 Fragaria x ananassa HOM05D004455 ORTHO05D005011 6.0e-23 111.3 134 51.5
TWI09G0077 Tripterygium wilfordii HOM05D004455 ORTHO05D005011 6.0e-23 111.3 124 52.4
Cpa.g.sc157.8 Carica papaya HOM05D004455 ORTHO05D005011 1.0e-22 110.5 118 56.8
CiPaw.02G062200 Carya illinoinensis HOM05D004455 ORTHO05D005011 1.0e-22 110.5 130 52.3
Peaxi162Scf00286g00082 Petunia axillaris HOM05D004455 ORTHO05D005011 1.3e-22 110.2 127 47.2
Prupe.1G172900 Prunus persica HOM05D004455 ORTHO05D005011 3.0e-22 109.0 122 50.8
Eucgr.L00642 Eucalyptus grandis HOM05D004455 ORTHO05D005011 5.1e-22 108.2 135 48.1
Glyma.11G253300 Glycine max HOM05D004455 ORTHO05D005011 5.1e-22 108.2 118 55.9
Duzib151G1126 Durio zibethinus HOM05D004455 ORTHO05D005011 6.6e-22 107.8 120 51.7
Zm00001eb364860 Zea mays HOM05D004455 ORTHO05D005011 6.6e-22 107.8 109 56.0
Ca_16434_v3 Cicer arietinum L. HOM05D004455 ORTHO05D005011 8.6e-22 107.5 130 50.8
ClCG08G003930 Citrullus lanatus HOM05D004455 ORTHO05D005011 8.6e-22 107.5 126 50.8
Psat7g076120 Pisum sativum HOM05D004455 ORTHO05D005011 8.6e-22 107.5 138 46.4
Duzib212G0061 Durio zibethinus HOM05D004455 ORTHO05D005011 1.1e-21 107.1 115 53.9
Duzib212G0695 Durio zibethinus HOM05D004455 ORTHO05D005011 1.1e-21 107.1 118 52.5
Aqoxy6G02150 Aquilegia oxysepala HOM05D004455 ORTHO05D005011 1.9e-21 106.3 126 48.4
Medtr3g084780 Medicago truncatula HOM05D004455 ORTHO05D005011 2.5e-21 105.9 106 56.6
MELO3C027001.2 Cucumis melo HOM05D004455 ORTHO05D005011 3.3e-21 105.5 119 50.4
Nn3g20121 Nelumbo nucifera HOM05D004455 ORTHO05D005011 3.3e-21 105.5 100 56.0
Lsat_1_v5_gn_6_58740 Lactuca sativa HOM05D004455 ORTHO05D005011 4.3e-21 105.1 128 47.7
PGR142G1429 Punica granatum HOM05D004455 ORTHO05D005011 4.3e-21 105.1 119 52.9
arahy.Tifrunner.gnm1.ann1.3CP281 Arachis hypogaea HOM05D004455 ORTHO05D005011 5.6e-21 104.8 122 53.3
Manes.05G198300 Manihot esculenta HOM05D004455 ORTHO05D005011 5.6e-21 104.8 133 47.4
Actinidia20846 Actinidia chinensis HOM05D004455 ORTHO05D005011 7.3e-21 104.4 102 52.0
arahy.Tifrunner.gnm1.ann1.PWIR9U Arachis hypogaea HOM05D004455 ORTHO05D005011 7.3e-21 104.4 108 55.6
Lalb_Chr12g0205921 Lupinus albus HOM05D004455 ORTHO05D005011 7.3e-21 104.4 132 50.0
Ca_18010_v3 Cicer arietinum L. HOM05D004455 ORTHO05D005011 9.6e-21 104.0 124 47.6
Oeu056457.1 Olea europaea HOM05D004455 ORTHO05D005011 9.6e-21 104.0 136 44.1
FAN22G2328 Fragaria x ananassa HOM05D004455 ORTHO05D005011 1.2e-20 103.6 139 47.5
Glyma.05G149800 Glycine max HOM05D004455 ORTHO05D005011 1.2e-20 103.6 135 46.7
arahy.Tifrunner.gnm1.ann1.N3F7NN Arachis hypogaea HOM05D004455 ORTHO05D005011 2.1e-20 102.8 106 55.7
PSO063G3308 Papaver somniferum HOM05D004455 ORTHO05D005011 2.8e-20 102.4 148 45.3
Phvul.001G264400 Phaseolus vulgaris HOM05D004455 ORTHO05D005011 2.8e-20 102.4 121 50.4
CAN.G2073.1 Capsicum annuum HOM05D004455 ORTHO05D005011 3.6e-20 102.1 133 45.9
MBI11_g07395_MAGBIO Magnolia biondii HOM05D000519 ORTHO05D005011 3.6e-20 102.1 130 46.2
Migut.G00820 Erythranthe guttata HOM05D004455 ORTHO05D005011 4.7e-20 101.7 120 46.7
THA.LOC104815881 Tarenaya hassleriana HOM05D004455 ORTHO05D005011 4.7e-20 101.7 125 48.0
Phvul.003G065700 Phaseolus vulgaris HOM05D004455 ORTHO05D005011 6.2e-20 101.3 107 54.2
Psat5g097200 Pisum sativum HOM05D004455 ORTHO05D005011 6.2e-20 101.3 114 48.2
AL4G27330 Arabidopsis lyrata HOM05D004455 ORTHO05D005011 8.1e-20 100.9 143 42.7
AL80U10090 Arabidopsis lyrata HOM05D004455 ORTHO05D005011 8.1e-20 100.9 143 42.7
Lj4g0016440 Lotus japonicus HOM05D004455 ORTHO05D005011 8.1e-20 100.9 132 49.2
AT2G31980 Arabidopsis thaliana HOM05D004455 ORTHO05D005011 1.1e-19 100.5 141 44.0
COL.COLO4_35967 Corchorus olitorius HOM05D004455 ORTHO05D005011 1.1e-19 100.5 125 46.4
CANSAT78G0162 Cannabis sativa HOM05D004455 ORTHO05D005011 1.4e-19 100.1 151 47.0
Migut.G01151 Erythranthe guttata HOM05D004455 ORTHO05D005011 1.4e-19 100.1 122 48.4
HanXRQChr11g0344521 Helianthus annuus HOM05D004455 ORTHO05D005011 1.8e-19 99.8 101 52.5
HanXRQChr11g0344531 Helianthus annuus HOM05D004455 ORTHO05D005011 1.8e-19 99.8 101 52.5
QL06p027589 Quercus lobata HOM05D004455 ORTHO05D005011 1.8e-19 99.8 112 55.4
Sc19g0007440 Simmondsia chinensis HOM05D004455 ORTHO05D005011 1.8e-19 99.8 123 44.7
THA.LOC104800950 Tarenaya hassleriana HOM05D004455 ORTHO05D005011 1.8e-19 99.8 104 54.8
VMungo0251G1529 Vigna mungo HOM05D004455 ORTHO05D005011 1.8e-19 99.8 130 48.5
Sp4g14360 Schrenkiella parvula HOM05D004455 ORTHO05D005011 3.1e-19 99.0 130 43.8
VMungo1383G1064 Vigna mungo HOM05D004455 ORTHO05D005011 3.1e-19 99.0 121 50.4
CARHR125730 Cardamine hirsuta HOM05D004455 ORTHO05D005011 4.0e-19 98.6 119 42.9
Medtr8g080920 Medicago truncatula HOM05D004455 ORTHO05D005011 4.0e-19 98.6 103 53.4
Glyma.18G003700 Glycine max HOM05D004455 ORTHO05D005011 6.8e-19 97.8 123 48.8
SGA_v2.0_scaffold17G08023 Striga asiatica HOM05D004455 ORTHO05D005011 6.8e-19 97.8 132 44.7
TPR.G11834 Trifolium pratense HOM05D004455 ORTHO05D005011 6.8e-19 97.8 124 46.8
Carub.0004s1330 Capsella rubella HOM05D004455 ORTHO05D005011 8.9e-19 97.4 139 43.9
Oeu022676.1 Olea europaea HOM05D004455 ORTHO05D005011 8.9e-19 97.4 118 47.5
CDE09G0913 Ceratophyllum demersum HOM05D004455 ORTHO05D005011 1.5e-18 96.7 132 46.2
Lsat_1_v5_gn_1_69140 Lactuca sativa HOM05D004455 ORTHO05D005011 1.5e-18 96.7 121 42.1
BcaC01g05924 Brassica carinata HOM05D004455 ORTHO05D005011 2.0e-18 96.3 131 45.0
Os01g0915200 Oryza sativa ssp. japonica HOM05D004455 ORTHO05D005011 2.0e-18 96.3 111 50.5
PSO675G4685 Papaver somniferum HOM05D004455 ORTHO05D005011 3.4e-18 95.5 126 44.4
BraA03t11061Z Brassica rapa HOM05D000474 ORTHO05D001061 4.4e-18 95.1 131 44.3
Sopen09g035790 Solanum pennellii HOM05D004455 ORTHO05D005011 5.8e-18 94.7 134 45.5
THA.LOC104800949 Tarenaya hassleriana HOM05D004455 ORTHO05D005011 5.8e-18 94.7 116 47.4
Solyc09g097850.1 Solanum lycopersicum HOM05D004455 ORTHO05D005011 7.6e-18 94.4 133 43.6
C03p21040 Brassica napus HOM05D000474 ORTHO05D005011 9.9e-18 94.0 131 44.3
BolC3t14486H Brassica oleracea HOM05D000474 ORTHO05D005011 9.9e-18 94.0 131 44.3
DCAR_011872 Daucus carota HOM05D004455 ORTHO05D005011 9.9e-18 94.0 127 41.7
unitig_747.g21663 Utricularia gibba HOM05D004455 ORTHO05D005011 9.9e-18 94.0 101 50.5
EL10Ac3g07440 Beta vulgaris HOM05D004455 ORTHO05D005011 1.3e-17 93.6 140 45.0
Nn1g08115 Nelumbo nucifera HOM05D004455 ORTHO05D005011 1.3e-17 93.6 134 46.3
THA.LOC104826169 Tarenaya hassleriana HOM05D004455 ORTHO05D005011 1.3e-17 93.6 128 45.3
BcaB02g10433 Brassica carinata HOM05D004455 ORTHO05D005011 1.7e-17 93.2 130 40.0
Nn1g08258 Nelumbo nucifera HOM05D004455 ORTHO05D005011 3.8e-17 92.0 135 46.7
Nn3g20123 Nelumbo nucifera HOM05D004455 ORTHO05D005011 4.9e-17 91.7 143 45.5
BolC4t23313H Brassica oleracea HOM05D004455 ORTHO05D005011 6.4e-17 91.3 132 41.7
BcaB01g04003 Brassica carinata HOM05D004455 ORTHO05D005011 8.4e-17 90.9 130 43.1
PGSC0003DMG400017928 Solanum tuberosum HOM05D004455 ORTHO05D005011 8.4e-17 90.9 134 45.5
AUR62018538 Chenopodium quinoa HOM05D004455 ORTHO05D005011 1.1e-16 90.5 108 51.9
AUR62020879 Chenopodium quinoa HOM05D004455 ORTHO05D005011 1.1e-16 90.5 106 50.9
Gohir.D09G201700 Gossypium hirsutum HOM05D004455 ORTHO05D005011 1.1e-16 90.5 131 43.5
PSO017G3265 Papaver somniferum HOM05D004455 ORTHO05D005011 1.4e-16 90.1 126 42.1
Ah.04g149600 Amaranthus hybridus HOM05D004455 ORTHO05D005011 1.9e-16 89.7 108 45.4
ECA233G0812 Erigeron canadensis HOM05D004455 ORTHO05D005011 1.9e-16 89.7 135 42.2
Thhalv10017392m.g Eutrema salsugineum HOM05D004455 ORTHO05D005011 1.9e-16 89.7 138 37.7
Sc25g0005730 Simmondsia chinensis HOM05D004455 ORTHO05D005011 1.9e-16 89.7 124 42.7
BcaB06g28575 Brassica carinata HOM05D000474 ORTHO05D005011 2.4e-16 89.4 126 41.3
A05p13560 Brassica napus HOM05D004455 ORTHO05D005011 3.2e-16 89.0 130 40.0
BraA05t20293Z Brassica rapa HOM05D004455 ORTHO05D005011 3.2e-16 89.0 130 40.0
Manes.05G198500 Manihot esculenta HOM05D004455 ORTHO05D005011 4.2e-16 88.6 133 45.1
ECA248G2326 Erigeron canadensis HOM05D004455 ORTHO05D005011 7.1e-16 87.8 105 43.8
Gohir.D02G018300 Gossypium hirsutum HOM05D004455 ORTHO05D005011 7.1e-16 87.8 97 50.5
Gorai.005G022500 Gossypium raimondii HOM05D004455 ORTHO05D005011 7.1e-16 87.8 97 50.5
PSO017G5773 Papaver somniferum HOM05D004455 ORTHO05D005011 7.1e-16 87.8 128 42.2
HanXRQChr02g0058381 Helianthus annuus HOM05D004455 ORTHO05D005011 9.3e-16 87.4 127 40.9
BcaC02g07957 Brassica carinata HOM05D004455 ORTHO05D005011 1.2e-15 87.0 128 39.1
C04p61510 Brassica napus HOM05D004455 ORTHO05D005011 1.2e-15 87.0 128 39.1
BolC4t27635H Brassica oleracea HOM05D004455 ORTHO05D005011 1.2e-15 87.0 128 39.1
Gohir.A02G016600 Gossypium hirsutum HOM05D004455 ORTHO05D005011 1.2e-15 87.0 97 50.5
Os04g0350100 Oryza sativa ssp. japonica HOM05D004455 ORTHO05D005011 1.2e-15 87.0 111 45.0
Gohir.A09G208200 Gossypium hirsutum HOM05D004455 ORTHO05D005011 1.6e-15 86.7 131 42.0
Os01g0915401 Oryza sativa ssp. japonica HOM05D004455 ORTHO05D005011 1.6e-15 86.7 107 47.7
A04p24620 Brassica napus HOM05D004455 ORTHO05D005011 2.7e-15 85.9 128 39.1
BraA04t17981Z Brassica rapa HOM05D004455 ORTHO05D005011 2.7e-15 85.9 128 39.1
PSO675G4781 Papaver somniferum HOM05D004455 ORTHO05D005011 2.7e-15 85.9 134 40.3
Aa31LG5G5030 Aethionema arabicum HOM05D004455 ORTHO05D005011 3.5e-15 85.5 140 36.4
PSO017G1287 Papaver somniferum HOM05D004455 ORTHO05D005011 6.0e-15 84.7 126 40.5
Gohir.D09G201800 Gossypium hirsutum HOM05D004455 ORTHO05D005011 7.8e-15 84.3 132 39.4
PSO675G6640 Papaver somniferum HOM05D004455 ORTHO05D005011 7.8e-15 84.3 126 38.9
HPP92_013636 Vanilla planifolia HOM05D004455 ORTHO05D005011 7.8e-15 84.3 133 40.6
PSO675G9247 Papaver somniferum HOM05D004455 ORTHO05D005011 1.3e-14 83.6 117 41.0
PSO017G4907 Papaver somniferum HOM05D004455 ORTHO05D005011 1.7e-14 83.2 117 41.0
MBI07_g12177_MAGBIO Magnolia biondii HOM05D000519 ORTHO05D005011 2.3e-14 82.8 96 45.8
Gohir.A09G208375 Gossypium hirsutum HOM05D004455 ORTHO05D005011 3.0e-14 82.4 120 40.8
SalBow1G4624 Salvia bowleyana HOM05D000401 ORTHO05D000252 3.9e-14 82.0 94 47.9
PSO135G0242 Papaver somniferum HOM05D004455 ORTHO05D005011 5.1e-14 81.6 103 46.6
SalBow4G2682 Salvia bowleyana HOM05D004455 ORTHO05D005011 1.1e-13 80.5 94 46.8
HPP92_013629 Vanilla planifolia HOM05D004455 ORTHO05D005011 1.1e-13 80.5 133 39.8
Gorai.006G225600 Gossypium raimondii HOM05D004455 ORTHO05D005011 2.5e-13 79.3 130 38.5
SalBow2G2613 Salvia bowleyana HOM05D004455 ORTHO05D005011 5.6e-13 78.2 94 46.8
ATR1147G019 Amborella trichopoda HOM05D004455 ORTHO05D005011 9.6e-13 77.4 97 44.3
Gohir.A09G208300 Gossypium hirsutum HOM05D004455 ORTHO05D005011 1.3e-12 77.0 128 38.3
Solyc12g098607.1 Solanum lycopersicum HOM05D004455 ORTHO05D005011 1.3e-12 77.0 122 38.5
Sopen12g033370 Solanum pennellii HOM05D004455 ORTHO05D005011 1.3e-12 77.0 122 38.5
Gorai.006G225500 Gossypium raimondii HOM05D004455 ORTHO05D005011 3.6e-12 75.5 110 43.6
Phvul.003G066200 Phaseolus vulgaris HOM05D004455 ORTHO05D005011 3.6e-12 75.5 119 42.0
CAN.G767.26 Capsicum annuum HOM05D004455 ORTHO05D005011 4.8e-12 75.1 100 43.0
ATR1147G012 Amborella trichopoda HOM05D004455 ORTHO05D005011 1.1e-11 73.9 117 37.6
HPP92_013639 Vanilla planifolia HOM05D002696 ORTHO05D003940 1.1e-11 73.9 118 39.0
Phvul.003G066500 Phaseolus vulgaris HOM05D004455 ORTHO05D005011 4.0e-11 72.0 128 38.3
Phvul.003G066600 Phaseolus vulgaris HOM05D004455 ORTHO05D005011 9.0e-11 70.9 129 41.1
PSO017G2962 Papaver somniferum HOM05D004455 ORTHO05D005011 1.2e-10 70.5 100 44.0
Phvul.003G066000 Phaseolus vulgaris HOM05D004455 ORTHO05D005011 1.7e-09 66.6 95 44.2
Sed0004852 Sechium edule HOM05D000519 ORTHO05D000959 6.4e-09 64.7 129 36.4
C09p31850 Brassica napus HOM05D000519 ORTHO05D000959 8.4e-09 64.3 122 33.6
Lalb_Chr03g0032601 Lupinus albus HOM05D000519 ORTHO05D001210 1.9e-08 63.2 100 36.0
SEGI_14656 Sequoiadendron giganteum HOM05D000519 ORTHO05D001210 1.2e-07 60.5 97 30.9
CARHR173800 Cardamine hirsuta HOM05D000519 ORTHO05D000959 3.5e-07 58.9 127 33.9
RcHm_v2.0_Chr1g0328521 Rosa chinensis HOM05D000519 ORTHO05D001210 3.5e-07 58.9 100 36.0
HPP92_006959 Vanilla planifolia HOM05D004455 ORTHO05D005011 6.0e-07 58.2 131 33.6
Mapoly0023s0004 Marchantia polymorpha HOM05D000519 ORTHO05D001210 7.9e-07 57.8 106 30.2
Pp3c9_24090 Physcomitrium patens HOM05D000519 ORTHO05D001210 7.9e-07 57.8 99 33.3
SEGI_10020 Sequoiadendron giganteum HOM05D000519 ORTHO05D001210 7.9e-07 57.8 97 35.1
AagrBONN_evm.TU.Sc2ySwM_117.4093 Anthoceros agrestis HOM05D000519 ORTHO05D001210 1.0e-06 57.4 100 35.0
BolC9t56041H Brassica oleracea HOM05D000519 ORTHO05D000959 1.0e-06 57.4 97 37.1
FAN06G3149 Fragaria x ananassa HOM05D000519 ORTHO05D001210 1.0e-06 57.4 100 36.0
Pp3c8_17580 Physcomitrium patens HOM05D000519 ORTHO05D001210 1.3e-06 57.0 98 33.7
FvH4_7g04180 Fragaria vesca HOM05D000519 ORTHO05D001210 1.7e-06 56.6 100 36.0
BcaB06g29185 Brassica carinata HOM05D000519 ORTHO05D001210 2.3e-06 56.2 132 27.3
FAN01G2306 Fragaria x ananassa HOM05D000519 ORTHO05D001210 2.3e-06 56.2 100 36.0
CARHR222900 Cardamine hirsuta HOM05D000519 ORTHO05D000959 3.0e-06 55.8 112 33.0
Pp3c13_18300 Physcomitrium patens HOM05D000519 ORTHO05D001210 5.1e-06 55.1 105 31.4
Prupe.1G014700 Prunus persica HOM05D004455 ORTHO05D005011 5.1e-06 55.1 70 42.9
GSVIVG01021035001 Vitis vinifera HOM05D004455 ORTHO05D005011 5.1e-06 55.1 69 49.3
CSS0027877 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 6.6e-06 54.7 96 33.3
CSS0046566 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 6.6e-06 54.7 97 34.0


User provided reference genes

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