Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 4.4e-214 747.7 375 100.0
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 9.6e-193 676.8 422 82.2
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.5e-153 546.6 377 71.9
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 1.5e-153 546.6 377 72.7
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.6e-150 536.6 382 74.1
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 3.5e-150 535.4 383 72.1
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 7.7e-150 534.3 383 71.8
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.3e-149 533.5 383 71.3
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 5.0e-149 531.6 390 69.7
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 6.5e-149 531.2 377 72.4
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 1.9e-148 529.6 380 71.6
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 4.2e-148 528.5 389 69.2
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 9.4e-148 527.3 383 70.5
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.2e-147 526.9 377 71.9
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 1.2e-147 526.9 359 72.7
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 1.6e-147 526.6 375 72.3
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.1e-147 526.2 359 72.7
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 3.6e-147 525.4 385 69.9
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 6.1e-147 524.6 375 71.5
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.0e-146 523.9 375 71.5
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 1.0e-146 523.9 386 70.2
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 1.4e-146 523.5 298 84.6
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 3.0e-146 522.3 380 69.7
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 6.8e-146 521.2 379 71.8
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 8.8e-146 520.8 377 70.3
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 8.8e-146 520.8 377 70.3
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 1.5e-145 520.0 378 69.6
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 2.0e-145 519.6 384 70.1
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.6e-145 519.2 379 70.4
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.6e-145 519.2 379 70.2
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 4.4e-145 518.5 312 79.8
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 4.4e-145 518.5 344 75.6
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 4.4e-145 518.5 379 70.2
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 4.4e-145 518.5 379 70.7
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 9.8e-145 517.3 385 69.1
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 1.3e-144 516.9 383 69.2
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 1.7e-144 516.5 344 73.8
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 2.2e-144 516.2 377 69.8
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 4.8e-144 515.0 385 69.1
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 6.3e-144 514.6 312 78.8
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 8.3e-144 514.2 314 79.6
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 8.3e-144 514.2 379 68.6
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 1.1e-143 513.8 321 77.3
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 1.1e-143 513.8 327 75.2
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 1.1e-143 513.8 327 75.2
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.1e-143 513.8 377 70.6
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.4e-143 513.5 377 69.5
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 1.4e-143 513.5 382 68.1
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.8e-143 513.1 377 70.3
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.8e-143 513.1 312 78.2
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.1e-143 511.9 380 68.4
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 7.0e-143 511.1 291 83.2
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 7.0e-143 511.1 377 67.6
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 1.2e-142 510.4 299 80.3
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 2.0e-142 509.6 379 67.0
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 2.0e-142 509.6 375 71.2
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 2.7e-142 509.2 375 66.7
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 3.5e-142 508.8 376 70.2
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 3.5e-142 508.8 372 70.4
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 3.5e-142 508.8 379 68.9
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 4.5e-142 508.4 303 81.5
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 4.5e-142 508.4 376 67.6
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 5.9e-142 508.1 372 68.3
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 5.9e-142 508.1 374 70.6
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 5.9e-142 508.1 379 67.8
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 7.7e-142 507.7 372 68.0
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.3e-141 506.9 372 67.7
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 2.3e-141 506.1 304 79.3
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 2.9e-141 505.8 386 67.4
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 2.9e-141 505.8 380 67.4
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 2.9e-141 505.8 291 82.8
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 3.8e-141 505.4 385 68.3
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 6.6e-141 504.6 316 76.9
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.1e-140 503.8 380 68.4
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 1.9e-140 503.1 375 69.3
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 2.5e-140 502.7 378 67.7
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 4.2e-140 501.9 388 66.8
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 1.2e-139 500.4 394 66.5
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 6.1e-139 498.0 299 79.6
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 6.1e-139 498.0 381 69.3
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.4e-138 496.9 378 66.1
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.2e-137 493.8 376 66.5
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.0e-137 493.0 380 66.8
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 2.0e-137 493.0 376 66.8
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 2.0e-137 493.0 349 70.2
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 5.7e-137 491.5 370 68.1
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 4.9e-136 488.4 293 79.9
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 1.4e-135 486.9 438 60.7
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 5.4e-135 485.0 430 61.6
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 1.0e-133 480.7 302 74.2
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 3.9e-133 478.8 385 64.2
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 1.0e-130 470.7 377 65.8
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 4.4e-129 465.3 293 74.1
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 9.8e-129 464.2 374 64.2
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 1.2e-126 457.2 283 77.7
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 9.5e-124 447.6 291 74.9
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.8e-122 443.4 338 68.3
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 4.4e-121 438.7 300 69.0
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 9.8e-121 437.6 363 59.5
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 2.2e-120 436.4 291 70.4
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.1e-119 434.1 302 67.5
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 7.1e-119 431.4 302 67.2
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 3.9e-117 425.6 229 88.6
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.1e-116 424.1 293 67.9
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 4.3e-116 422.2 303 66.3
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 1.1e-111 407.5 446 54.3
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 8.4e-96 354.8 310 57.7
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 5.4e-95 352.1 182 89.0
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 6.9e-90 335.1 273 67.8
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 3.4e-89 332.8 315 58.7
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 1.3e-83 314.3 215 67.9
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 2.8e-83 313.2 267 63.3
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 1.8e-82 310.5 279 61.3
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 3.1e-82 309.7 272 61.8
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 7.4e-76 288.5 268 58.6
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 6.5e-72 275.4 377 45.6
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.7e-51 206.5 242 50.0
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 2.9e-24 117.1 149 51.0
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 5.0e-24 116.3 149 51.0
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 8.9e-21 105.5 94 56.4
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 4.6e-17 93.2 63 68.3
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 9.2e-10 68.9 39 71.8


User provided reference genes

Program Settings