Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 1.4e-105 386.3 200 100.0
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 5.5e-86 321.2 203 86.7
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 1.9e-46 189.9 145 69.0
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 3.3e-46 189.1 156 66.0
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.2e-45 187.2 141 70.2
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 1.8e-44 183.3 195 55.4
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 3.0e-44 182.6 149 65.8
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 8.9e-44 181.0 149 65.1
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.5e-43 180.3 103 86.4
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.5e-43 180.3 103 86.4
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 5.7e-43 178.3 148 66.2
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 7.5e-43 177.9 181 59.1
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 7.5e-43 177.9 172 57.0
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 6.3e-42 174.9 159 60.4
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 6.3e-42 174.9 159 60.4
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 1.1e-41 174.1 174 54.6
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 1.4e-41 173.7 175 58.9
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 1.8e-41 173.3 105 81.9
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 3.1e-41 172.6 170 60.0
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.2e-40 170.6 158 60.1
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 1.2e-40 170.6 119 73.9
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 1.2e-40 170.6 128 70.3
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 2.0e-40 169.9 125 72.0
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 2.0e-40 169.9 149 63.1
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 2.7e-40 169.5 163 57.1
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 2.7e-40 169.5 131 67.9
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 3.5e-40 169.1 162 55.6
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 4.5e-40 168.7 102 80.4
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 5.9e-40 168.3 105 79.0
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 5.9e-40 168.3 181 54.1
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 5.9e-40 168.3 179 56.4
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 5.9e-40 168.3 162 62.3
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 7.8e-40 167.9 102 80.4
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 1.0e-39 167.5 125 70.4
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 1.0e-39 167.5 105 77.1
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.7e-39 166.8 129 65.1
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 1.7e-39 166.8 102 79.4
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 1.7e-39 166.8 129 64.3
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 2.9e-39 166.0 186 50.0
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 3.8e-39 165.6 105 78.1
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 3.8e-39 165.6 106 77.4
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 5.0e-39 165.2 194 51.0
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 5.0e-39 165.2 135 63.0
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 5.0e-39 165.2 99 80.8
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 6.6e-39 164.9 177 54.2
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 6.6e-39 164.9 125 66.4
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 8.6e-39 164.5 102 77.5
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 1.1e-38 164.1 141 68.8
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.1e-38 164.1 171 55.6
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 1.5e-38 163.7 105 75.2
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 1.5e-38 163.7 138 63.8
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 1.9e-38 163.3 181 53.6
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.9e-38 163.3 105 78.1
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 1.9e-38 163.3 183 54.1
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 1.9e-38 163.3 183 54.1
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 1.9e-38 163.3 183 54.1
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 2.5e-38 162.9 147 57.8
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 2.5e-38 162.9 123 66.7
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 3.3e-38 162.5 182 52.7
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 3.3e-38 162.5 182 52.7
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 7.3e-38 161.4 182 52.7
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 7.3e-38 161.4 155 58.1
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 9.5e-38 161.0 186 52.7
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 2.1e-37 159.8 105 74.3
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 2.1e-37 159.8 127 64.6
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 2.1e-37 159.8 164 56.1
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 2.1e-37 159.8 168 53.0
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 2.1e-37 159.8 130 63.8
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 2.8e-37 159.5 173 53.8
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 3.6e-37 159.1 115 70.4
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 3.6e-37 159.1 124 65.3
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 3.6e-37 159.1 118 71.2
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 6.1e-37 158.3 107 72.0
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 8.0e-37 157.9 117 66.7
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 1.0e-36 157.5 176 51.7
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 1.0e-36 157.5 117 65.8
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.8e-36 156.8 133 61.7
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 1.8e-36 156.8 134 64.2
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 1.8e-36 156.8 149 55.0
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 1.8e-36 156.8 117 65.8
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 3.0e-36 156.0 167 55.1
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 4.0e-36 155.6 105 70.5
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 4.0e-36 155.6 105 71.4
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 5.2e-36 155.2 153 56.2
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 6.8e-36 154.8 167 52.1
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 2.0e-35 153.3 108 69.4
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 2.6e-35 152.9 130 60.8
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 4.4e-35 152.1 104 72.1
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 4.4e-35 152.1 127 63.0
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 1.3e-34 150.6 125 63.2
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 4.9e-34 148.7 100 74.0
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 6.4e-34 148.3 105 71.4
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.1e-33 147.5 85 83.5
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 3.2e-33 146.0 85 81.2
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 7.0e-33 144.8 104 64.4
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 3.5e-32 142.5 85 78.8
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 7.8e-32 141.4 105 64.8
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 7.8e-32 141.4 86 77.9
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.4e-28 130.6 84 76.2
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.2e-27 127.5 136 50.0
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.2e-27 127.5 136 50.0
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 2.2e-26 123.2 98 60.2
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 1.2e-24 117.5 100 56.0
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 5.0e-23 112.1 86 59.3
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 1.2e-08 64.3 38 76.3


User provided reference genes

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