Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 4.5e-198 694.5 379 100.0
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.1e-175 620.2 385 88.3
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 1.9e-172 609.4 382 89.8
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 8.0e-163 577.4 384 74.7
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 4.1e-159 565.1 409 71.9
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 4.0e-154 548.5 386 75.1
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 2.0e-153 546.2 391 74.2
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 2.6e-153 545.8 386 70.5
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 2.4e-151 539.3 391 71.9
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 3.0e-149 532.3 368 72.3
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 5.1e-149 531.6 368 70.7
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 6.6e-149 531.2 392 66.3
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 2.5e-148 529.3 387 70.0
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 2.4e-146 522.7 384 66.9
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 3.4e-145 518.8 384 67.7
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 4.4e-145 518.5 388 66.2
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 4.9e-144 515.0 390 71.0
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 6.4e-144 514.6 387 69.8
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 8.4e-144 514.2 384 67.2
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.1e-143 513.8 383 67.1
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 1.1e-143 513.8 386 66.6
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.9e-143 513.1 385 72.2
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 4.1e-143 511.9 384 66.4
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 9.2e-143 510.8 388 65.7
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 1.1e-140 503.8 369 70.5
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 9.6e-140 500.7 384 64.1
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.6e-139 500.0 369 68.8
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.1e-139 499.6 392 64.5
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 2.1e-139 499.6 388 63.9
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 4.7e-139 498.4 393 63.9
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 6.2e-139 498.0 396 64.4
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 8.1e-139 497.7 417 61.9
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.1e-138 497.3 385 72.2
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 5.2e-138 495.0 390 62.6
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 6.9e-138 494.6 388 63.1
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 6.9e-138 494.6 392 64.3
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.5e-137 493.4 396 68.2
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 2.0e-137 493.0 385 73.8
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 2.0e-137 493.0 387 64.1
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 2.6e-137 492.7 393 64.1
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 3.4e-137 492.3 389 66.6
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 4.4e-137 491.9 442 58.8
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 4.4e-137 491.9 394 63.5
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 2.9e-136 489.2 384 64.8
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.8e-136 488.8 392 63.3
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.1e-135 487.3 390 61.8
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.1e-135 487.3 385 70.1
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 3.2e-135 485.7 372 68.3
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 4.2e-135 485.3 395 63.8
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.2e-134 483.8 395 62.0
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.6e-134 483.4 384 64.3
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.6e-134 483.4 384 64.3
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 2.7e-134 482.6 383 64.5
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 7.8e-134 481.1 384 63.5
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.0e-133 480.7 396 66.2
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.3e-133 479.6 392 62.5
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 3.0e-133 479.2 368 70.7
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 3.0e-133 479.2 396 62.6
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 3.0e-133 479.2 368 64.1
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 3.9e-133 478.8 369 61.8
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.1e-132 477.2 399 64.7
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 3.3e-132 475.7 391 61.9
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 5.6e-132 474.9 369 61.2
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.6e-131 473.4 369 65.9
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 2.1e-131 473.0 392 62.0
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 8.1e-131 471.1 392 65.1
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.8e-130 469.9 392 61.5
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 4.0e-130 468.8 377 65.8
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 2.6e-129 466.1 387 60.7
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 4.5e-129 465.3 373 68.1
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 4.5e-129 465.3 390 61.0
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 9.9e-129 464.2 368 60.1
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.3e-128 463.8 390 60.5
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 2.9e-128 462.6 341 68.0
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 3.8e-128 462.2 374 67.1
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 3.8e-128 462.2 390 60.3
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 4.6e-126 455.3 377 62.3
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 6.7e-125 451.4 394 57.9
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 1.3e-123 447.2 387 62.5
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 1.6e-123 446.8 408 60.0
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 1.6e-123 446.8 337 66.2
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 6.2e-123 444.9 427 57.1
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 8.1e-123 444.5 385 63.1
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 3.1e-122 442.6 369 62.1
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 4.0e-122 442.2 388 62.4
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 1.5e-121 440.3 386 62.7
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 1.5e-121 440.3 422 54.5
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 2.0e-121 439.9 385 62.6
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 3.8e-120 435.6 382 57.6
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 3.2e-119 432.6 391 58.1
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 7.1e-119 431.4 318 66.7
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 4.6e-118 428.7 388 56.7
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 6.0e-118 428.3 387 56.1
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 1.5e-116 423.7 385 56.1
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 3.3e-116 422.5 422 55.7
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 6.9e-114 414.8 369 56.6
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 5.8e-113 411.8 340 65.3
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 2.2e-112 409.8 399 54.6
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 8.4e-112 407.9 384 56.0
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 1.1e-111 407.5 344 59.6
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.9e-111 406.8 379 57.8
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.5e-108 397.1 390 55.6
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 6.9e-106 388.3 384 53.6
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.6e-105 386.3 384 53.1
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 1.9e-100 370.2 381 50.7
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.8e-96 355.9 303 59.4
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 2.7e-94 349.7 260 71.9
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 5.9e-89 332.0 276 65.2
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 5.0e-80 302.4 200 75.0
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.5e-79 300.1 379 47.5
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.3e-77 293.5 380 47.6
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 1.1e-74 284.6 232 62.9
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 9.1e-74 281.6 348 48.3
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 1.9e-71 273.9 384 40.4
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 8.8e-69 265.0 286 51.4
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 3.7e-67 259.6 229 59.4
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 5.0e-64 249.2 315 46.3
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.4e-60 236.5 298 42.6
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.5e-57 226.5 152 67.8
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.1e-47 194.9 234 44.4
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.6e-46 191.0 205 46.8
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 2.3e-45 187.2 142 66.2
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 1.7e-40 171.0 116 71.6
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 3.0e-40 170.2 356 32.6
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 3.9e-40 169.9 121 66.9
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 3.3e-39 166.8 189 56.1
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 3.3e-23 113.6 342 28.4
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 9.0e-21 105.5 344 27.3
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 7.8e-17 92.4 119 42.0
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 6.2e-14 82.8 140 37.1
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 8.1e-14 82.4 61 67.2
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 9.3e-10 68.9 78 51.3
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-08 64.3 58 44.8
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.1e-07 62.0 111 33.3


User provided reference genes

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