Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 2.3e-108 395.6 197 100.0
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 1.4e-102 376.3 197 94.9
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 1.2e-80 303.5 196 77.6
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 3.4e-80 302.0 196 77.6
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 1.1e-78 297.0 192 77.6
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 1.4e-78 296.6 193 76.7
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 3.2e-78 295.4 194 77.8
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 3.2e-78 295.4 190 77.4
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 7.1e-78 294.3 194 77.8
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 1.2e-77 293.5 190 77.4
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 2.7e-77 292.4 192 77.1
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 6.0e-77 291.2 190 74.7
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 1.0e-76 290.4 189 76.2
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 1.7e-76 289.7 190 74.2
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 3.0e-76 288.9 199 72.4
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 3.0e-76 288.9 199 72.4
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 6.6e-76 287.7 192 77.1
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 6.6e-76 287.7 190 80.0
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 8.6e-76 287.3 190 74.7
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 8.6e-76 287.3 190 75.8
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 8.6e-76 287.3 194 76.3
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 1.1e-75 287.0 192 77.6
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 1.5e-75 286.6 195 70.3
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 1.9e-75 286.2 192 74.0
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 2.5e-75 285.8 196 72.4
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 2.5e-75 285.8 187 78.1
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 3.3e-75 285.4 190 73.2
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 5.6e-75 284.6 190 74.2
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 7.3e-75 284.3 191 72.3
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 1.2e-74 283.5 196 75.5
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 1.2e-74 283.5 196 75.5
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 2.8e-74 282.3 192 76.6
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 8.1e-74 280.8 190 72.6
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 1.4e-73 280.0 192 71.9
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 1.4e-73 280.0 191 74.3
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.1e-73 278.9 196 72.4
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 4.0e-73 278.5 192 74.0
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 5.2e-73 278.1 190 73.2
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 6.8e-73 277.7 191 76.4
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 8.9e-73 277.3 227 66.5
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 2.0e-72 276.2 191 70.7
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 2.0e-72 276.2 191 70.7
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 2.6e-72 275.8 187 75.9
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 5.8e-72 274.6 190 73.2
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 5.8e-72 274.6 191 70.2
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 5.8e-72 274.6 191 70.2
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 9.9e-72 273.9 191 70.2
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 9.9e-72 273.9 191 70.7
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 1.7e-71 273.1 191 72.3
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 1.7e-71 273.1 195 73.8
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 1.7e-71 273.1 192 71.9
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 2.2e-71 272.7 190 74.2
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 2.9e-71 272.3 190 72.6
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 3.8e-71 271.9 182 76.9
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 6.4e-71 271.2 193 68.9
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 6.4e-71 271.2 190 70.5
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 6.4e-71 271.2 196 73.5
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 1.4e-70 270.0 191 69.6
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 3.2e-70 268.9 194 70.1
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 4.2e-70 268.5 191 68.1
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 4.2e-70 268.5 192 72.4
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 4.2e-70 268.5 192 72.4
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 7.1e-70 267.7 192 71.9
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 1.2e-69 266.9 191 69.1
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 1.2e-69 266.9 192 70.3
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 1.2e-69 266.9 196 68.9
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 1.2e-69 266.9 196 72.4
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 1.6e-69 266.5 191 68.6
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 1.6e-69 266.5 190 71.1
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 3.5e-69 265.4 193 68.9
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 3.9e-68 261.9 191 67.5
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 3.9e-68 261.9 200 67.5
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 6.6e-68 261.2 193 69.9
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.1e-67 260.4 192 70.3
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 1.1e-67 260.4 204 66.7
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 1.5e-67 260.0 194 69.1
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 5.6e-67 258.1 194 69.6
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 7.3e-67 257.7 191 69.1
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 3.6e-66 255.4 195 67.7
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 3.6e-66 255.4 228 60.5
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 4.8e-66 255.0 204 67.2
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 6.2e-66 254.6 193 67.4
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 1.4e-65 253.4 190 67.9
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 1.4e-62 243.4 191 66.5
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 5.4e-62 241.5 194 67.5
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 1.2e-61 240.4 189 63.5
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 4.6e-61 238.4 193 67.9
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 3.0e-60 235.7 190 63.7
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 3.9e-60 235.3 194 64.9
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.9e-59 233.0 194 64.4
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 2.5e-59 232.6 194 64.4
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 1.3e-58 230.3 275 49.5
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 2.1e-58 229.6 155 76.1
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 1.7e-55 219.9 183 63.4
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 2.2e-55 219.5 194 61.9
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 1.4e-54 216.9 190 63.2
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 1.9e-54 216.5 190 62.6
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 2.4e-54 216.1 187 59.4
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 4.2e-54 215.3 191 61.3
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.0e-52 210.7 189 60.8
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 1.3e-52 210.3 191 60.2
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 5.1e-52 208.4 193 57.5
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 1.5e-51 206.8 190 60.0
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 5.6e-51 204.9 192 56.8
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 5.6e-51 204.9 187 57.8
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 3.2e-46 189.1 150 64.0
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 1.9e-35 153.3 116 69.8
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 2.5e-35 152.9 186 48.9
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 6.9e-33 144.8 185 45.9
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 3.4e-32 142.5 114 64.9
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 6.3e-26 121.7 184 40.2
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 1.4e-25 120.6 114 57.9
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 2.5e-22 109.8 120 55.8
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 4.4e-19 99.0 53 81.1
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.9e-12 75.9 46 73.9
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 8.8e-12 74.7 189 29.6
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 3.3e-11 72.8 78 47.4
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 4.4e-11 72.4 35 91.4
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 8.2e-10 68.2 201 29.9
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 1.3e-07 60.8 62 58.1


User provided reference genes

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