Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G123500 Populus trichocarpa HOM05D007468 ORTHO05D009051 4.0e-97 358.2 197 100.0
Sabra14G0091900 Salix brachista HOM05D007468 ORTHO05D009051 4.0e-73 278.5 197 81.7
Potri.002G199100 Populus trichocarpa HOM05D007468 ORTHO05D009051 7.4e-43 177.9 201 63.2
Sabra02G0158900 Salix brachista HOM05D007468 ORTHO05D009051 6.1e-29 131.7 121 62.0
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 3.1e-25 119.4 197 41.1
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 3.9e-20 102.4 178 41.6
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 3.9e-20 102.4 202 41.6
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 4.1e-17 92.4 198 37.4
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 1.2e-16 90.9 169 39.6
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 2.0e-16 90.1 198 35.9
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 5.9e-16 88.6 169 39.6
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 1.5e-14 84.0 168 41.1
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 1.9e-14 83.6 195 37.4
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 2.5e-14 83.2 214 35.0
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 9.4e-14 81.3 186 34.4
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 1.2e-13 80.9 186 37.1
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 4.7e-13 79.0 208 36.5
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 8.0e-13 78.2 135 41.5
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 1.0e-12 77.8 166 38.6
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 1.4e-12 77.4 168 39.3
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 3.0e-12 76.3 189 33.3
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 3.0e-12 76.3 191 34.0
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 3.0e-12 76.3 206 32.5
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 5.2e-12 75.5 176 38.1
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 6.7e-12 75.1 197 35.5
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 8.8e-12 74.7 182 36.3
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 8.8e-12 74.7 145 37.9
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 1.1e-11 74.3 168 42.9
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 1.5e-11 73.9 179 36.3
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 3.3e-11 72.8 168 33.3
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 7.4e-11 71.6 181 34.8
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 1.3e-10 70.9 168 32.7
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 1.7e-10 70.5 186 39.2
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 2.2e-10 70.1 168 35.7
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 2.2e-10 70.1 181 36.5
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 2.8e-10 69.7 133 39.8
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 3.7e-10 69.3 168 33.9
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 4.8e-10 68.9 178 36.0
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 4.8e-10 68.9 187 34.2
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 4.8e-10 68.9 176 42.0
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 6.3e-10 68.6 186 32.8
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 8.2e-10 68.2 181 37.0
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 8.2e-10 68.2 183 40.4
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 1.1e-09 67.8 178 36.0
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.1e-09 67.8 177 37.3
MBI19_g29995_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 1.1e-09 67.8 185 33.5
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.4e-09 67.4 178 36.0
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 1.8e-09 67.0 171 37.4
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 3.1e-09 66.2 226 31.4
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 7.0e-09 65.1 205 29.3
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 7.0e-09 65.1 175 39.4
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 7.0e-09 65.1 175 40.0
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 1.2e-08 64.3 183 33.3
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.2e-08 64.3 197 33.0
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 1.6e-08 63.9 175 38.3
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 2.6e-08 63.2 169 34.3
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 7.7e-08 61.6 166 31.3
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 7.7e-08 61.6 205 35.6
CiPaw.08G091800 Carya illinoinensis HOM05D007468 ORTHO05D009051 1.0e-07 61.2 200 31.5
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.3e-07 60.8 188 35.1
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 1.7e-07 60.5 179 32.4
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 2.9e-07 59.7 169 33.7
Dinv10066 Davidia involucrata HOM05D007468 ORTHO05D009051 6.5e-07 58.5 107 37.4
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 8.5e-07 58.2 161 34.2
ATR0706G066 Amborella trichopoda HOM05D045150 ORTHO05D009051 1.1e-06 57.8 162 32.7
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 1.1e-06 57.8 154 42.2
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 1.5e-06 57.4 161 34.2
PSO357G0021 Papaver somniferum HOM05D007468 ORTHO05D009051 2.5e-06 56.6 167 32.9
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 4.2e-06 55.8 193 33.2
CARHR250340 Cardamine hirsuta HOM05D010095 ORTHO05D012148 7.2e-06 55.1 185 35.7
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 7.2e-06 55.1 215 27.9
BcaB03g15797 Brassica carinata HOM05D010095 ORTHO05D012148 9.4e-06 54.7 179 31.3
Medtr7g109300 Medicago truncatula HOM05D007468 ORTHO05D009051 9.4e-06 54.7 246 28.0


User provided reference genes

Program Settings