Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G122100 Populus trichocarpa HOM05D006641 ORTHO05D007573 3.0e-105 385.2 195 100.0
Sabra14G0090500 Salix brachista HOM05D006641 ORTHO05D007573 1.6e-82 309.7 194 82.0
Potri.002G196900 Populus trichocarpa HOM05D006641 ORTHO05D007573 5.0e-76 288.1 199 78.9
Sabra02G0160400 Salix brachista HOM05D006641 ORTHO05D007573 4.9e-71 271.6 199 76.4
Atru.chr5.1033 Acer truncatum HOM05D006641 ORTHO05D007573 4.3e-59 231.9 200 66.0
QL12p020167 Quercus lobata HOM05D006641 ORTHO05D007573 3.1e-57 225.7 196 65.3
Thecc.01G311800 Theobroma cacao HOM05D006641 ORTHO05D007573 1.3e-55 220.3 201 61.7
Manes.05G002600 Manihot esculenta HOM05D006641 ORTHO05D007573 7.0e-54 214.5 196 66.3
Duzib138G1609 Durio zibethinus HOM05D006641 ORTHO05D007573 9.2e-54 214.2 200 64.5
Prupe.8G270900 Prunus persica HOM05D006641 ORTHO05D007573 7.3e-51 204.5 197 59.9
TWI36G0114 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 1.6e-50 203.4 201 58.7
Cfa005814 Carpinus fangiana HOM05D006641 ORTHO05D007573 2.8e-50 202.6 199 61.8
Duzib133G1491 Durio zibethinus HOM05D006641 ORTHO05D007573 3.6e-50 202.2 200 59.0
Hma1.2p1_0486F.1_g163110 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 4.0e-49 198.7 187 59.9
Hma1.2p1_0486F.1_g163121 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 4.0e-49 198.7 187 59.9
Oeu008464.1 Olea europaea HOM05D006641 ORTHO05D007573 8.9e-49 197.6 198 58.1
Gorai.001G143700 Gossypium raimondii HOM05D006641 ORTHO05D007573 2.6e-48 196.1 202 59.4
Ciclev10021856m.g Citrus clementina HOM05D006641 ORTHO05D007573 3.4e-48 195.7 188 63.3
Duzib211G0496 Durio zibethinus HOM05D006641 ORTHO05D007573 3.4e-48 195.7 200 59.0
Gohir.D07G132300 Gossypium hirsutum HOM05D006641 ORTHO05D007573 3.4e-48 195.7 202 59.4
CiPaw.07G116300 Carya illinoinensis HOM05D006641 ORTHO05D007573 9.9e-48 194.1 202 60.4
Gohir.A07G127900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 9.9e-48 194.1 202 59.9
TAR362G0542 Trochodendron aralioides HOM05D006641 ORTHO05D007573 1.7e-47 193.4 196 57.1
TPR.G19761 Trifolium pratense HOM05D006641 ORTHO05D007573 4.9e-47 191.8 196 55.1
Aqoxy2G01829 Aquilegia oxysepala HOM05D006641 ORTHO05D007573 8.3e-47 191.0 197 56.9
COL.COLO4_23247 Corchorus olitorius HOM05D006641 ORTHO05D007573 8.3e-47 191.0 200 57.0
CSS0030498 Camellia sinensis var. sinensis HOM05D006641 ORTHO05D007573 1.9e-46 189.9 197 59.4
MD03G1296400 Malus domestica HOM05D006641 ORTHO05D007573 2.4e-46 189.5 199 59.8
Nn3g21666 Nelumbo nucifera HOM05D006641 ORTHO05D007573 3.2e-46 189.1 202 57.9
Manes.01G226800 Manihot esculenta HOM05D006641 ORTHO05D007573 4.1e-46 188.7 196 61.7
FvH4_5g39350 Fragaria vesca HOM05D006641 ORTHO05D007573 7.1e-46 188.0 198 57.6
Dinv33109 Davidia involucrata HOM05D006641 ORTHO05D007573 1.2e-45 187.2 191 62.3
FAN13G0974 Fragaria x ananassa HOM05D001136 ORTHO05D007573 2.1e-45 186.4 198 57.1
Medtr1g087230 Medicago truncatula HOM05D006641 ORTHO05D007573 2.7e-45 186.0 195 52.3
FAN08G0230 Fragaria x ananassa HOM05D001136 ORTHO05D007573 7.8e-45 184.5 198 56.6
FAN08G2922 Fragaria x ananassa HOM05D006641 ORTHO05D007573 7.8e-45 184.5 198 56.6
FAN18G1732 Fragaria x ananassa HOM05D001136 ORTHO05D007573 7.8e-45 184.5 198 56.6
RcHm_v2.0_Chr7g0241631 Rosa chinensis HOM05D006641 ORTHO05D007573 7.8e-45 184.5 198 55.6
FAN04G2480 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.3e-44 183.7 198 55.6
MD11G1315800 Malus domestica HOM05D006641 ORTHO05D007573 3.9e-44 182.2 199 56.3
vmacro02409 Vaccinium macrocarpon HOM05D006641 ORTHO05D007573 2.5e-43 179.5 201 55.7
PSO210G6531 Papaver somniferum HOM05D006641 ORTHO05D007573 7.3e-43 177.9 199 53.8
Hma1.2p1_0212F.1_g090010 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 1.2e-42 177.2 201 54.7
Ca_10290_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.6e-42 176.8 196 52.6
Ca_30054_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.6e-42 176.8 196 52.6
Lalb_Chr15g0078301 Lupinus albus HOM05D006641 ORTHO05D007573 2.1e-42 176.4 198 52.0
Psat6g162160 Pisum sativum HOM05D006641 ORTHO05D007573 4.7e-42 175.3 197 51.3
Haze_05028 Corylus avellana HOM05D006641 ORTHO05D007573 8.1e-42 174.5 178 59.6
Glyma.19G215600 Glycine max HOM05D006641 ORTHO05D007573 8.1e-42 174.5 195 53.8
Gohir.D08G139900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.8e-41 173.3 205 55.1
Lj5g0026629 Lotus japonicus HOM05D006641 ORTHO05D007573 2.4e-41 172.9 203 52.2
Gorai.004G144000 Gossypium raimondii HOM05D006641 ORTHO05D007573 4.0e-41 172.2 205 55.1
Nitab4.5_0001301g0080 Nicotiana tabacum HOM05D006641 ORTHO05D007573 5.2e-41 171.8 208 49.5
AUR62024668 Chenopodium quinoa HOM05D006641 ORTHO05D007573 6.8e-41 171.4 200 51.5
PSO761G0656 Papaver somniferum HOM05D006641 ORTHO05D007573 8.9e-41 171.0 199 52.8
SalBow3G3599 Salvia bowleyana HOM05D006641 ORTHO05D007573 8.9e-41 171.0 200 53.0
Lj1g0024392 Lotus japonicus HOM05D006641 ORTHO05D007573 1.2e-40 170.6 201 53.7
Phvul.001G212200 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 1.2e-40 170.6 196 51.5
PGSC0003DMG400009037 Solanum tuberosum HOM05D006641 ORTHO05D007573 1.5e-40 170.2 209 51.2
Glyma.03G218800 Glycine max HOM05D006641 ORTHO05D007573 2.6e-40 169.5 197 52.8
Gohir.A08G119133 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.6e-40 169.5 205 54.6
Solyc01g079550.2 Solanum lycopersicum HOM05D006641 ORTHO05D007573 2.6e-40 169.5 204 52.0
EL10As5g23515 Beta vulgaris HOM05D006641 ORTHO05D007573 3.4e-40 169.1 198 52.5
ClCG09G005170 Citrullus lanatus HOM05D006641 ORTHO05D007573 5.8e-40 168.3 199 53.3
MELO3C015931.2 Cucumis melo HOM05D006641 ORTHO05D007573 5.8e-40 168.3 186 53.8
Sopen01g031320 Solanum pennellii HOM05D006641 ORTHO05D007573 5.8e-40 168.3 204 51.5
CsaV3_7G029900 Cucumis sativus L. HOM05D006641 ORTHO05D007573 9.9e-40 167.5 186 53.8
VMungo0007G0001 Vigna mungo HOM05D006641 ORTHO05D007573 9.9e-40 167.5 195 48.7
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 1.7e-39 166.8 179 51.4
Nitab4.5_0008979g0010 Nicotiana tabacum HOM05D006641 ORTHO05D007573 1.7e-39 166.8 201 49.8
CANSAT25G1473 Cannabis sativa HOM05D006641 ORTHO05D007573 6.4e-39 164.9 206 51.0
Rhsim13G0005400 Rhododendron simsii HOM05D006641 ORTHO05D007573 6.4e-39 164.9 200 50.0
Cc01_g21330 Coffea canephora HOM05D006641 ORTHO05D007573 8.4e-39 164.5 229 47.2
Lalb_Chr02g0146781 Lupinus albus HOM05D006641 ORTHO05D007573 1.1e-38 164.1 182 52.2
Sed0015554 Sechium edule HOM05D006641 ORTHO05D007573 1.4e-38 163.7 199 51.8
Peaxi162Scf00691g00003 Petunia axillaris HOM05D006641 ORTHO05D007573 1.9e-38 163.3 201 49.8
Migut.D00088 Erythranthe guttata HOM05D006641 ORTHO05D007573 2.4e-38 162.9 213 48.8
Glyma.10G013800 Glycine max HOM05D006641 ORTHO05D007573 3.2e-38 162.5 202 48.0
Eucgr.H01054 Eucalyptus grandis HOM05D006641 ORTHO05D007573 5.4e-38 161.8 190 55.3
TAR589G0002 Trochodendron aralioides HOM05D006641 ORTHO05D007573 5.4e-38 161.8 160 58.8
TAR633G2793 Trochodendron aralioides HOM05D006641 ORTHO05D007573 5.4e-38 161.8 160 58.8
Phvul.007G214900 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 1.2e-37 160.6 196 46.4
Cpa.g.sc18.26 Carica papaya HOM05D006641 ORTHO05D007573 1.6e-37 160.2 205 52.2
arahy.Tifrunner.gnm1.ann1.DB9XMS Arachis hypogaea HOM05D006641 ORTHO05D007573 2.1e-37 159.8 200 48.0
DCAR_005769 Daucus carota HOM05D006641 ORTHO05D007573 2.1e-37 159.8 201 48.8
Gohir.A12G125900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.1e-37 159.8 183 53.6
VMungo1383G0778 Vigna mungo HOM05D006641 ORTHO05D007573 2.7e-37 159.5 184 51.1
AUR62011824 Chenopodium quinoa HOM05D006641 ORTHO05D007573 3.5e-37 159.1 200 49.5
DCAR_002902 Daucus carota HOM05D006641 ORTHO05D007573 3.5e-37 159.1 198 48.0
PGR119G1902 Punica granatum HOM05D006641 ORTHO05D007573 3.5e-37 159.1 211 49.8
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 6.0e-37 158.3 183 49.2
Medtr7g109410 Medicago truncatula HOM05D006641 ORTHO05D007573 1.7e-36 156.8 198 48.0
Ah.11g049320 Amaranthus hybridus HOM05D000446 ORTHO05D000321 5.1e-36 155.2 200 48.5
SGA_v2.0_scaffold376G50279 Striga asiatica HOM05D006641 ORTHO05D007573 6.6e-36 154.8 197 46.2
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 1.5e-35 153.7 186 53.2
Lsat_1_v5_gn_9_2880 Lactuca sativa HOM05D006641 ORTHO05D007573 1.9e-35 153.3 202 50.0
Psat3g020560 Pisum sativum HOM05D006641 ORTHO05D007573 4.3e-35 152.1 201 48.8
Glyma.02G013200 Glycine max HOM05D006641 ORTHO05D007573 1.6e-34 150.2 197 45.7
HanXRQChr15g0465011 Helianthus annuus HOM05D006641 ORTHO05D007573 3.1e-33 146.0 190 48.4
PSO170G1046 Papaver somniferum HOM05D006641 ORTHO05D007573 6.9e-33 144.8 204 48.0
Actinidia27614 Actinidia chinensis HOM05D006641 ORTHO05D007573 1.2e-32 144.1 177 52.0
Gohir.D12G129400 Gossypium hirsutum HOM05D006641 ORTHO05D007573 5.8e-32 141.7 182 47.3
PSO357G0224 Papaver somniferum HOM05D006641 ORTHO05D007573 5.8e-32 141.7 204 47.5
Gorai.008G140500 Gossypium raimondii HOM05D006641 ORTHO05D007573 7.6e-32 141.4 182 47.3
CiPaw.08G090800 Carya illinoinensis HOM05D006641 ORTHO05D007573 5.4e-30 135.2 197 45.7
ATR0706G193 Amborella trichopoda HOM05D006641 ORTHO05D007573 6.6e-28 128.3 202 42.1
arahy.Tifrunner.gnm1.ann1.Q9I7GX Arachis hypogaea HOM05D006641 ORTHO05D007573 7.6e-24 114.8 168 43.5
AT4G02090 Arabidopsis thaliana HOM05D006641 ORTHO05D007573 1.3e-20 104.0 202 40.1
THA.LOC104801302 Tarenaya hassleriana HOM05D006641 ORTHO05D007573 6.7e-20 101.7 214 39.7
CARHR249590 Cardamine hirsuta HOM05D006641 ORTHO05D007573 1.1e-19 100.9 206 39.8
TPR.G4797 Trifolium pratense HOM05D006641 ORTHO05D007573 1.1e-19 100.9 153 45.1
BcaC04g24036 Brassica carinata HOM05D001136 ORTHO05D007573 1.5e-19 100.5 220 39.1
A09p01550 Brassica napus HOM05D006641 ORTHO05D007573 1.5e-19 100.5 224 38.8
BolC9t53098H Brassica oleracea HOM05D001136 ORTHO05D007573 1.5e-19 100.5 220 39.1
C09p01650 Brassica napus HOM05D001136 ORTHO05D007573 2.5e-19 99.8 220 39.1
AL6G51140 Arabidopsis lyrata HOM05D006641 ORTHO05D007573 7.4e-19 98.2 213 38.5
Sp6g01980 Schrenkiella parvula HOM05D006641 ORTHO05D007573 1.3e-18 97.4 223 37.2
BraA09t35814Z Brassica rapa HOM05D001136 ORTHO05D007573 2.1e-18 96.7 220 38.6
Aa31LG5G1730 Aethionema arabicum HOM05D006641 ORTHO05D007573 2.8e-18 96.3 217 36.9
BcaB01g02078 Brassica carinata HOM05D006641 ORTHO05D007573 8.1e-18 94.7 217 38.7
Eucgr.K03540 Eucalyptus grandis HOM05D006641 ORTHO05D007573 8.1e-18 94.7 217 36.4
Carub.0006s3513 Capsella rubella HOM05D006641 ORTHO05D007573 1.4e-17 94.0 214 37.4
TWI75G0789 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 1.2e-16 90.9 116 49.1
Thhalv10029320m.g Eutrema salsugineum HOM05D006641 ORTHO05D007573 5.8e-16 88.6 225 36.0
Zm00001eb396340 Zea mays HOM05D006641 ORTHO05D007573 3.8e-15 85.9 211 33.2
Os03g0305200 Oryza sativa ssp. japonica HOM05D006641 ORTHO05D007573 1.0e-12 77.8 213 31.9
CDE05G1007 Ceratophyllum demersum HOM05D006641 ORTHO05D007573 1.3e-12 77.4 91 49.5
HPP92_018375 Vanilla planifolia HOM05D006641 ORTHO05D007573 5.1e-12 75.5 196 32.7
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 1.4e-09 67.4 189 34.4
Actinidia21410 Actinidia chinensis HOM05D000446 ORTHO05D000321 5.3e-09 65.5 93 48.4
ATR0326G051 Amborella trichopoda HOM05D001935 ORTHO05D001700 1.2e-08 64.3 188 31.9
Zm00001eb014520 Zea mays HOM05D006641 ORTHO05D007573 7.6e-08 61.6 210 30.5
CDE06G0938 Ceratophyllum demersum HOM05D001935 ORTHO05D001700 1.0e-07 61.2 112 37.5
SGA_v2.0_scaffold14G06923 Striga asiatica HOM05D001935 ORTHO05D001700 1.3e-07 60.8 120 36.7
SEGI_04656 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 2.9e-07 59.7 189 29.6
THA.LOC104802908 Tarenaya hassleriana HOM05D001935 ORTHO05D001700 2.9e-07 59.7 193 27.5
TAR629G0885 Trochodendron aralioides HOM05D007478 ORTHO05D001700 6.5e-07 58.5 170 30.6
ATR0326G068 Amborella trichopoda HOM05D001935 ORTHO05D001700 8.4e-07 58.2 191 30.4
MD14G1237300 Malus domestica HOM05D007478 ORTHO05D001700 5.5e-06 55.5 180 30.6
Glyma.08G055200 Glycine max HOM05D007478 ORTHO05D001700 9.3e-06 54.7 186 29.0


User provided reference genes

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