Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 2.9e-42 174.9 92 100.0
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 8.8e-31 136.7 84 85.7
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 1.9e-25 119.0 94 68.1
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 1.2e-24 116.3 94 64.9
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 4.8e-21 104.4 94 58.5
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 9.1e-20 100.1 94 57.4
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 9.1e-20 100.1 93 57.0
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 1.2e-19 99.8 89 65.2
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 1.6e-19 99.4 94 58.5
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.6e-19 99.4 94 58.5
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 1.6e-19 99.4 81 64.2
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 2.7e-19 98.6 94 54.3
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 4.5e-19 97.8 81 65.4
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 5.9e-19 97.4 93 55.9
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 7.7e-19 97.1 81 70.4
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 2.2e-18 95.5 93 60.2
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 2.9e-18 95.1 84 63.1
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 3.8e-18 94.7 94 59.6
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 5.0e-18 94.4 92 53.3
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 5.0e-18 94.4 81 65.4
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 6.5e-18 94.0 94 53.2
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 1.1e-17 93.2 76 65.8
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 1.1e-17 93.2 88 59.1
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 1.1e-17 93.2 93 52.7
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 1.5e-17 92.8 80 68.8
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 1.5e-17 92.8 84 60.7
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 3.2e-17 91.7 91 58.2
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 5.5e-17 90.9 83 57.8
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 5.5e-17 90.9 89 58.4
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 7.2e-17 90.5 82 58.5
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 7.2e-17 90.5 82 58.5
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 7.2e-17 90.5 84 59.5
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 9.5e-17 90.1 78 62.8
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 9.5e-17 90.1 78 64.1
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 9.5e-17 90.1 94 55.3
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 1.2e-16 89.7 80 61.2
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 1.2e-16 89.7 89 58.4
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 1.6e-16 89.4 95 49.5
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 2.1e-16 89.0 78 65.4
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 2.1e-16 89.0 91 56.0
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 2.1e-16 89.0 82 57.3
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 2.1e-16 89.0 83 61.4
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 3.6e-16 88.2 91 57.1
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 3.6e-16 88.2 81 63.0
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 4.7e-16 87.8 93 57.0
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 4.7e-16 87.8 82 58.5
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 6.1e-16 87.4 94 57.4
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 1.0e-15 86.7 93 57.0
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 1.0e-15 86.7 80 61.2
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 1.0e-15 86.7 91 56.0
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 1.0e-15 86.7 76 64.5
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 1.0e-15 86.7 86 53.5
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 2.3e-15 85.5 85 58.8
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 4.0e-15 84.7 81 61.7
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 5.2e-15 84.3 76 61.8
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 6.8e-15 84.0 88 55.7
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 8.8e-15 83.6 75 64.0
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 1.5e-14 82.8 87 54.0
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 2.0e-14 82.4 86 54.7
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.6e-14 82.0 79 59.5
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 3.4e-14 81.6 81 60.5
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 3.4e-14 81.6 76 61.8
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 4.4e-14 81.3 74 56.8
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 7.5e-14 80.5 81 59.3
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 7.5e-14 80.5 81 59.3
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 9.8e-14 80.1 73 58.9
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 1.3e-13 79.7 86 52.3
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 1.7e-13 79.3 89 52.8
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 2.2e-13 79.0 91 51.6
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 2.8e-13 78.6 95 51.6
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 3.7e-13 78.2 75 58.7
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 3.7e-13 78.2 90 51.1
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 4.9e-13 77.8 81 55.6
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 6.3e-13 77.4 77 55.8
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-12 76.3 70 52.9
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 2.4e-12 75.5 85 50.6
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 3.1e-12 75.1 75 57.3
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 3.1e-12 75.1 92 51.1
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 3.1e-12 75.1 77 51.9
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 4.1e-12 74.7 75 54.7
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 4.1e-12 74.7 75 56.0
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 7.0e-12 73.9 73 58.9
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 1.2e-11 73.2 75 56.0
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 1.6e-11 72.8 87 50.6
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 2.7e-11 72.0 75 53.3
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 4.5e-11 71.2 55 65.5
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 5.9e-11 70.9 55 65.5
Carub.0001s3677 Capsella rubella HOM05D007627 ORTHO05D009640 5.9e-11 70.9 82 52.4
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 7.8e-11 70.5 79 51.9
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 1.3e-10 69.7 58 67.2
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-09 65.9 61 49.2
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 3.3e-09 65.1 77 50.6
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 4.3e-09 64.7 60 56.7
Carub.0001s3693 Capsella rubella HOM05D007627 ORTHO05D009640 9.5e-09 63.5 81 50.6
Carub.0001s3680 Capsella rubella HOM05D007627 ORTHO05D009640 2.1e-08 62.4 83 50.6
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 3.6e-08 61.6 76 47.4


User provided reference genes

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