Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 2.8e-126 455.3 233 100.0
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 1.2e-84 317.0 223 69.5
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.6e-84 316.6 232 69.8
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 2.7e-84 315.8 223 69.5
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 4.6e-84 315.1 223 68.2
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 3.6e-81 305.4 223 68.2
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 4.7e-81 305.1 233 67.4
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 6.2e-81 304.7 223 68.2
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 3.1e-80 302.4 220 69.1
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 7.6e-79 297.7 221 63.8
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 2.9e-78 295.8 222 65.3
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 1.4e-77 293.5 222 65.3
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 2.4e-77 292.7 223 68.6
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 4.1e-77 292.0 223 67.7
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 5.4e-77 291.6 235 63.4
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 1.2e-76 290.4 221 65.2
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 3.0e-75 285.8 223 67.7
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 3.9e-75 285.4 223 67.3
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 6.6e-75 284.6 229 63.8
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 1.5e-74 283.5 223 67.3
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 3.3e-74 282.3 220 63.6
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 9.6e-74 280.8 222 62.6
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.2e-73 280.4 229 65.9
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 1.6e-73 280.0 223 65.0
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 6.2e-73 278.1 222 65.3
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 1.4e-72 276.9 220 61.8
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 4.0e-72 275.4 223 63.2
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 1.5e-71 273.5 220 60.9
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.8e-71 271.6 233 63.9
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 4.9e-70 268.5 222 60.8
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 8.4e-70 267.7 219 60.3
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 1.9e-69 266.5 235 60.0
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 2.4e-69 266.2 220 59.5
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 5.4e-69 265.0 229 58.5
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 7.1e-69 264.6 228 61.4
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 6.0e-68 261.5 220 59.1
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 1.0e-67 260.8 194 65.5
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 1.3e-67 260.4 220 58.6
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.3e-67 260.4 223 60.5
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 6.6e-67 258.1 220 59.5
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.5e-66 256.9 210 62.9
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 3.3e-66 255.8 229 60.3
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.3e-65 253.8 231 58.0
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 1.6e-65 253.4 221 59.7
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.8e-65 252.7 236 60.6
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 4.8e-65 251.9 221 59.3
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 3.1e-64 249.2 231 57.6
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 5.3e-64 248.4 219 59.4
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 6.9e-64 248.1 221 58.8
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 6.9e-64 248.1 221 58.8
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 9.0e-64 247.7 219 57.1
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 1.5e-63 246.9 230 57.8
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 2.0e-63 246.5 220 58.2
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 2.0e-63 246.5 222 58.6
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 4.5e-63 245.4 226 57.5
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 7.6e-63 244.6 230 57.4
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 7.6e-63 244.6 172 69.2
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 9.9e-63 244.2 220 57.7
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 1.9e-61 240.0 223 56.5
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 4.2e-61 238.8 221 55.7
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 5.4e-61 238.4 222 55.9
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 5.4e-61 238.4 222 57.2
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 5.4e-61 238.4 222 55.9
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 7.1e-61 238.0 233 58.8
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 9.3e-61 237.7 222 56.3
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 9.3e-61 237.7 222 55.9
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 9.3e-61 237.7 225 56.9
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 2.7e-60 236.1 222 55.0
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 7.9e-60 234.6 222 55.0
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.8e-59 233.4 220 55.9
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 2.3e-59 233.0 222 55.4
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 3.0e-59 232.6 223 52.0
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 6.7e-59 231.5 259 51.4
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 1.9e-58 229.9 258 51.2
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.4e-56 223.8 231 53.2
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.4e-56 223.8 222 51.8
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 3.1e-56 222.6 210 57.6
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 3.1e-56 222.6 218 52.3
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 3.1e-56 222.6 215 53.0
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 3.4e-55 219.2 228 51.3
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.8e-55 218.4 221 58.8
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 2.2e-54 216.5 142 68.3
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 2.9e-54 216.1 235 49.8
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 6.4e-54 214.9 221 50.7
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 6.4e-54 214.9 193 59.1
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 7.1e-53 211.5 227 51.5
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 6.0e-52 208.4 179 61.5
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 7.9e-52 208.0 221 49.3
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 1.3e-51 207.2 198 54.0
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 5.1e-51 205.3 227 52.4
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 2.4e-48 196.4 217 47.5
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 6.9e-48 194.9 219 50.2
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 1.4e-45 187.2 300 41.7
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 4.2e-45 185.7 198 52.5
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 2.5e-42 176.4 191 50.8
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 8.2e-41 171.4 195 51.3
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 2.0e-39 166.8 250 44.4
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 6.5e-38 161.8 201 45.3
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 8.5e-38 161.4 179 49.7
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 2.5e-37 159.8 277 40.1
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 2.1e-36 156.8 167 49.1
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 4.6e-36 155.6 132 64.4
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 1.8e-35 153.7 306 35.6
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 2.3e-35 153.3 203 43.3
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 1.7e-33 147.1 86 74.4
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 2.8e-33 146.4 297 35.0
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 3.7e-33 146.0 145 52.4
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 5.3e-32 142.1 220 37.7
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 4.5e-31 139.0 210 38.6
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 1.7e-30 137.1 213 39.0
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 3.8e-30 136.0 139 47.5
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 4.2e-29 132.5 140 56.4
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.7e-28 129.8 75 76.0
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 4.7e-28 129.0 72 77.8
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.3e-27 126.7 210 36.7
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 2.8e-25 119.8 240 36.2
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 4.8e-25 119.0 121 54.5
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 1.2e-23 114.4 240 33.3
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 7.2e-21 105.1 194 38.7
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.2e-20 104.4 81 71.6
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 8.0e-20 101.7 196 35.7
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 3.5e-15 86.3 106 48.1
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 1.4e-11 74.3 58 72.4
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 2.0e-10 70.5 166 32.5
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 1.1e-08 64.7 81 50.6


User provided reference genes

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