Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 3.7e-51 204.5 98 100.0
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 2.0e-25 119.0 99 65.7
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 1.1e-23 113.2 98 59.2
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 2.7e-22 108.6 80 62.5
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 2.7e-22 108.6 96 50.0
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 3.6e-22 108.2 89 58.4
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 3.6e-22 108.2 89 58.4
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 4.7e-22 107.8 95 56.8
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.4e-21 106.3 89 57.3
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 3.0e-21 105.1 85 56.5
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 5.2e-21 104.4 98 51.0
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 5.7e-20 100.9 66 63.6
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 7.4e-20 100.5 97 50.5
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 7.4e-20 100.5 78 56.4
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 1.7e-19 99.4 93 51.6
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 1.7e-19 99.4 93 51.6
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.2e-19 99.0 78 55.1
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 1.1e-18 96.7 81 50.6
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 1.1e-18 96.7 85 50.6
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 4.1e-18 94.7 95 52.6
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 7.0e-18 94.0 71 60.6
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.0e-17 92.4 74 59.5
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 2.0e-17 92.4 82 52.4
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 2.0e-17 92.4 89 51.7
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 2.6e-17 92.0 91 51.6
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.6e-17 92.0 91 51.6
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.6e-17 92.0 74 59.5
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 7.7e-17 90.5 72 59.7
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 1.0e-16 90.1 78 55.1
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 5.0e-16 87.8 95 49.5
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 6.5e-16 87.4 79 49.4
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 1.5e-15 86.3 85 50.6
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 2.5e-15 85.5 65 60.0
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 5.5e-15 84.3 62 56.5
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 1.2e-14 83.2 85 45.9
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 1.0e-13 80.1 80 48.8
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 1.8e-13 79.3 78 44.9
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 2.3e-13 79.0 92 42.4
arahy.Tifrunner.gnm1.ann1.FJCJ23 Arachis hypogaea HOM05D007943 ORTHO05D010047 8.8e-13 77.0 66 45.5
TAR375G0647 Trochodendron aralioides HOM05D007943 ORTHO05D010047 8.8e-13 77.0 73 47.9
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 2.6e-12 75.5 79 45.6
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 3.4e-12 75.1 67 52.2
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 3.4e-12 75.1 75 48.0
Glyma.19G259000 Glycine max HOM05D007943 ORTHO05D010047 4.4e-12 74.7 93 37.6
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 4.4e-12 74.7 77 42.9
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 5.7e-12 74.3 70 47.1
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 9.8e-12 73.6 70 47.1
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 9.8e-12 73.6 64 51.6
AL1G11360 Arabidopsis lyrata HOM05D007943 ORTHO05D010047 1.7e-11 72.8 65 44.6
Carub.0001s0107 Capsella rubella HOM05D007943 ORTHO05D010047 1.7e-11 72.8 73 43.8
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 1.7e-11 72.8 82 43.9
Aqoxy7G00012 Aquilegia oxysepala HOM05D007943 ORTHO05D010047 2.2e-11 72.4 68 45.6
Sc23g0001870 Simmondsia chinensis HOM05D007943 ORTHO05D010047 2.2e-11 72.4 63 52.4
Glyma.03G260100 Glycine max HOM05D007943 ORTHO05D010047 3.7e-11 71.6 76 40.8
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 8.3e-11 70.5 71 45.1
A09p68930 Brassica napus HOM05D007943 ORTHO05D010047 4.1e-10 68.2 83 41.0
BolC8t52866H Brassica oleracea HOM05D007943 ORTHO05D010047 5.4e-10 67.8 71 43.7
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 1.2e-09 66.6 55 47.3
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 2.0e-09 65.9 68 44.1
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 1.3e-08 63.2 60 43.3
CsaV3_3G007690 Cucumis sativus L. HOM05D007943 ORTHO05D010047 2.2e-08 62.4 79 32.9
MELO3C005988.2 Cucumis melo HOM05D007943 ORTHO05D010047 2.9e-08 62.0 79 32.9
CsaV3_3G007710 Cucumis sativus L. HOM05D007943 ORTHO05D010047 1.1e-07 60.1 79 38.0
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 1.5e-07 59.7 78 35.9
Rhsim01G0178600 Rhododendron simsii HOM05D007943 ORTHO05D010047 1.5e-07 59.7 71 43.7
Sed0006019 Sechium edule HOM05D007943 ORTHO05D010047 3.2e-07 58.5 77 36.4
ClCG05G000500 Citrullus lanatus HOM05D007943 ORTHO05D010047 3.6e-06 55.1 64 37.5
Zm00001eb073340 Zea mays HOM05D007943 ORTHO05D010047 3.6e-06 55.1 49 44.9
Os03g0126900 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 4.7e-06 54.7 47 44.7


User provided reference genes

Program Settings