Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 1.6e-21 105.1 51 100.0
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 5.1e-12 73.6 51 62.7
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 1.5e-11 72.0 52 67.3
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 5.6e-11 70.1 51 60.8
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 4.8e-10 67.0 52 59.6
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 6.2e-10 66.6 51 62.7
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 6.2e-10 66.6 51 62.7
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 6.2e-10 66.6 51 62.7
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 8.1e-10 66.2 52 59.6
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 1.8e-09 65.1 52 57.7
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 1.8e-09 65.1 52 55.8
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 2.4e-09 64.7 52 57.7
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 5.3e-09 63.5 52 59.6
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 5.3e-09 63.5 44 61.4
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 6.9e-09 63.2 52 63.5
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 6.9e-09 63.2 45 66.7
Gohir.D07G144200 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.2e-08 62.4 44 59.1
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 1.5e-08 62.0 52 55.8
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 1.5e-08 62.0 51 56.9
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 2.0e-08 61.6 52 61.5
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 2.0e-08 61.6 52 53.8
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 2.0e-08 61.6 52 57.7
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 5.8e-08 60.1 52 57.7
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 7.6e-08 59.7 52 57.7
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 9.9e-08 59.3 52 51.9
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 1.3e-07 58.9 52 51.9
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.3e-07 58.9 51 56.9
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 3.8e-07 57.4 52 50.0
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 6.4e-07 56.6 52 51.9
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 1.4e-06 55.5 52 53.8
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 3.2e-06 54.3 52 50.0
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 3.2e-06 54.3 52 53.8
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 5.4e-06 53.5 52 50.0


User provided reference genes

Program Settings