Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G095600 Populus trichocarpa HOM05D007041 ORTHO05D008036 9.9e-77 290.0 147 100.0
Sabra14G0070100 Salix brachista HOM05D007041 ORTHO05D008036 2.0e-53 212.6 132 81.1
Potri.002G168300 Populus trichocarpa HOM05D007041 ORTHO05D008036 6.3e-31 137.9 142 62.7
Sabra02G0143600 Salix brachista HOM05D007041 ORTHO05D008036 5.5e-27 124.8 120 64.2
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 1.7e-15 86.7 135 43.0
Manes.01G248300 Manihot esculenta HOM05D007041 ORTHO05D008036 1.4e-14 83.6 117 49.6
Manes.05G025400 Manihot esculenta HOM05D007041 ORTHO05D008036 1.4e-14 83.6 123 42.3
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 1.8e-14 83.2 119 40.3
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 5.4e-14 81.6 103 46.6
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 5.4e-14 81.6 103 46.6
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 5.0e-12 75.1 123 43.9
Lalb_Chr17g0342361 Lupinus albus HOM05D007041 ORTHO05D008036 3.3e-11 72.4 139 33.1
TAR629G2489 Trochodendron aralioides HOM05D007041 ORTHO05D008036 4.3e-11 72.0 117 37.6
Atru.chr5.628 Acer truncatum HOM05D007041 ORTHO05D008036 7.3e-11 71.2 116 40.5
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 7.3e-11 71.2 120 37.5
Cpa.g.sc2382.1 Carica papaya HOM05D007041 ORTHO05D008036 1.6e-10 70.1 74 54.1
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.1e-10 69.7 109 43.1
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.8e-10 69.3 117 36.8
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 2.8e-10 69.3 120 34.2
Nitab4.5_0000305g0050 Nicotiana tabacum HOM05D007041 ORTHO05D008036 2.8e-10 69.3 49 61.2
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 3.6e-10 68.9 133 35.3
Medtr8g027905 Medicago truncatula HOM05D001941 ORTHO05D008036 8.0e-10 67.8 63 52.4
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.4e-09 67.0 120 33.3
Lj3g0003817 Lotus japonicus HOM05D007041 ORTHO05D008036 1.4e-09 67.0 133 33.8
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 1.8e-09 66.6 116 34.5
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.8e-09 66.6 120 33.3
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 1.8e-09 66.6 127 35.4
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 1.8e-09 66.6 58 51.7
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 2.3e-09 66.2 99 40.4
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.3e-09 66.2 104 36.5
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 3.1e-09 65.9 130 39.2
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 5.2e-09 65.1 131 32.8
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 5.2e-09 65.1 113 37.2
TPR.G7659 Trifolium pratense HOM05D007041 ORTHO05D008036 6.8e-09 64.7 132 31.1
A09p53730 Brassica napus HOM05D007041 ORTHO05D008036 8.9e-09 64.3 39 69.2
BraA09t40795Z Brassica rapa HOM05D007041 ORTHO05D008036 8.9e-09 64.3 39 69.2
Gohir.A07G139300 Gossypium hirsutum HOM05D007041 ORTHO05D008036 8.9e-09 64.3 103 39.8
Gohir.D07G144400 Gossypium hirsutum HOM05D007041 ORTHO05D008036 8.9e-09 64.3 103 40.8
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 1.2e-08 63.9 132 32.6
Medtr8g027305 Medicago truncatula HOM05D007041 ORTHO05D008036 1.2e-08 63.9 56 55.4
TPR.G7661 Trifolium pratense HOM05D007041 ORTHO05D008036 1.5e-08 63.5 62 50.0
Nn3g19073 Nelumbo nucifera HOM05D007041 ORTHO05D008036 2.0e-08 63.2 111 38.7
Phvul.010G111500 Phaseolus vulgaris HOM05D007041 ORTHO05D008036 2.0e-08 63.2 122 32.0
CANSAT56G1227 Cannabis sativa HOM05D007041 ORTHO05D008036 2.6e-08 62.8 106 40.6
Gorai.001G156400 Gossypium raimondii HOM05D007041 ORTHO05D008036 2.6e-08 62.8 103 39.8
Medtr8g027915 Medicago truncatula HOM05D007041 ORTHO05D008036 2.6e-08 62.8 57 52.6
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 2.6e-08 62.8 136 32.4
C08p36510 Brassica napus HOM05D007041 ORTHO05D008036 3.4e-08 62.4 39 66.7
BolC8t51234H Brassica oleracea HOM05D007041 ORTHO05D008036 3.4e-08 62.4 39 66.7
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 3.4e-08 62.4 109 35.8
Carub.0005s2835 Capsella rubella HOM05D007041 ORTHO05D008036 5.8e-08 61.6 43 60.5
AUR62023489 Chenopodium quinoa HOM05D007041 ORTHO05D008036 5.8e-08 61.6 39 76.9
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 5.8e-08 61.6 145 30.3
VMungo0331G1585 Vigna mungo HOM05D007041 ORTHO05D008036 5.8e-08 61.6 40 67.5
Thhalv10006386m.g Eutrema salsugineum HOM05D007041 ORTHO05D008036 7.5e-08 61.2 39 64.1
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 9.8e-08 60.8 45 57.8
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 9.8e-08 60.8 135 31.1
AL5G44060 Arabidopsis lyrata HOM05D007041 ORTHO05D008036 1.3e-07 60.5 37 67.6
AT3G61660 Arabidopsis thaliana HOM05D007041 ORTHO05D008036 1.3e-07 60.5 37 67.6
SalBow3G2736 Salvia bowleyana HOM05D007041 ORTHO05D008036 1.3e-07 60.5 45 55.6
Sp5g01745 Schrenkiella parvula HOM05D007041 ORTHO05D008036 1.3e-07 60.5 37 67.6
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 2.2e-07 59.7 65 49.2
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 2.2e-07 59.7 127 35.4
arahy.Tifrunner.gnm1.ann1.LKBY4F Arachis hypogaea HOM05D007041 ORTHO05D008036 2.9e-07 59.3 78 35.9
CARHR171970 Cardamine hirsuta HOM05D007041 ORTHO05D008036 2.9e-07 59.3 34 73.5
Oeu007855.1 Olea europaea HOM05D007041 ORTHO05D008036 2.9e-07 59.3 122 33.6
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 4.9e-07 58.5 90 40.0
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 4.9e-07 58.5 98 41.8
Potri.001G094000 Populus trichocarpa HOM05D007041 ORTHO05D008036 8.3e-07 57.8 63 44.4
Nn2g15118 Nelumbo nucifera HOM05D007041 ORTHO05D008036 1.1e-06 57.4 51 58.8
Glyma.19G254100 Glycine max HOM05D007041 ORTHO05D008036 1.4e-06 57.0 126 32.5
Peaxi162Scf00843g00001 Petunia axillaris HOM05D007041 ORTHO05D008036 1.9e-06 56.6 42 59.5
CsaV3_3G008250 Cucumis sativus L. HOM05D007041 ORTHO05D008036 3.2e-06 55.8 87 35.6
Migut.B01841 Erythranthe guttata HOM05D007041 ORTHO05D008036 4.1e-06 55.5 42 54.8
Rhsim01G0170500 Rhododendron simsii HOM05D007041 ORTHO05D008036 4.1e-06 55.5 128 32.8
TAR636G2915 Trochodendron aralioides HOM05D007041 ORTHO05D008036 4.1e-06 55.5 98 36.7
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 4.1e-06 55.5 115 37.4
Manes.02G012350 Manihot esculenta HOM05D007041 ORTHO05D008036 5.4e-06 55.1 56 53.6
Sopen08g030330 Solanum pennellii HOM05D002045 ORTHO05D002014 5.4e-06 55.1 47 51.1
Medtr7g117120 Medicago truncatula HOM05D007041 ORTHO05D008036 7.0e-06 54.7 54 46.3
Oeu009948.1 Olea europaea HOM05D007041 ORTHO05D008036 7.0e-06 54.7 101 29.7
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 7.0e-06 54.7 44 54.5
Haze_08658 Corylus avellana HOM05D007041 ORTHO05D008036 9.2e-06 54.3 94 36.2


User provided reference genes

Program Settings