Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.4e-136 489.6 239 100.0
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.0e-94 350.5 239 74.1
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 5.4e-72 275.0 156 85.9
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 1.7e-62 243.4 239 53.1
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 2.2e-57 226.5 239 51.5
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 2.5e-53 213.0 241 49.8
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 4.3e-53 212.2 244 49.2
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 2.8e-52 209.5 244 48.4
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 2.8e-52 209.5 244 48.4
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 1.4e-48 197.2 241 44.8
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 1.4e-48 197.2 241 42.7
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 1.9e-48 196.8 233 45.9
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 3.5e-47 192.6 237 47.3
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 6.2e-44 181.8 211 47.9
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 2.3e-38 163.3 226 41.6
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 1.3e-36 157.5 246 41.1
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 4.8e-36 155.6 243 39.9
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 7.6e-34 148.3 237 40.5
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 7.6e-34 148.3 247 38.5
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 2.2e-33 146.7 237 39.2
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 4.6e-31 139.0 240 40.4
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 5.1e-30 135.6 218 38.1
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 6.7e-30 135.2 221 38.9
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.1e-29 134.4 221 38.9
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 1.1e-29 134.4 200 40.0
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.9e-29 133.7 218 37.6
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 2.5e-29 133.3 239 39.3
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 3.3e-29 132.9 218 37.6
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 3.3e-29 132.9 217 39.2
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.6e-28 130.6 226 37.6
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 1.4e-27 127.5 242 35.5
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 6.9e-27 125.2 252 33.7
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 7.6e-26 121.7 191 37.2
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 9.3e-24 114.8 184 35.9
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 2.1e-23 113.6 185 34.6
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 1.1e-21 107.8 175 35.4
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 2.5e-21 106.7 103 51.5
Nitab4.5_0003779g0040 Nicotiana tabacum HOM05D008545 ORTHO05D010341 2.1e-20 103.6 194 35.1
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 1.1e-19 101.3 235 29.4
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 9.0e-19 98.2 103 48.5
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 2.6e-18 96.7 72 63.9
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 3.4e-18 96.3 136 41.2
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 3.2e-16 89.7 166 30.7
Actinidia10102 Actinidia chinensis HOM05D008545 ORTHO05D010341 4.2e-16 89.4 120 45.8
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.6e-15 87.4 174 33.9
DCAR_008649 Daucus carota HOM05D008545 ORTHO05D010341 1.3e-14 84.3 269 31.2
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 9.7e-13 78.2 129 34.9
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 4.1e-11 72.8 107 35.5
Oeu007845.1 Olea europaea HOM05D008545 ORTHO05D010341 1.5e-10 70.9 244 26.6
CANSAT56G3625 Cannabis sativa HOM05D008545 ORTHO05D010341 1.0e-09 68.2 72 45.8
DCAR_016072 Daucus carota HOM05D008545 ORTHO05D010341 3.8e-09 66.2 183 33.3
Cpa.g.sc194.12 Carica papaya HOM05D008545 ORTHO05D010341 6.5e-09 65.5 74 47.3
SalBow3G1564 Salvia bowleyana HOM05D008545 ORTHO05D010341 9.4e-08 61.6 141 29.8
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 4.6e-07 59.3 252 25.0
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 1.0e-06 58.2 276 23.2


User provided reference genes

Program Settings