Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.2e-242 842.8 425 100.0
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 5.4e-232 807.4 425 95.5
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 5.9e-231 803.9 415 97.6
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 8.6e-230 800.0 425 93.9
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 3.6e-228 794.7 425 93.2
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 3.6e-228 794.7 425 93.4
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.4e-227 792.7 425 93.2
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.2e-226 789.6 425 92.9
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 1.2e-226 789.6 425 93.2
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 2.8e-225 785.0 424 91.5
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 3.7e-225 784.6 449 89.8
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 8.3e-225 783.5 425 91.3
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 3.1e-224 781.6 422 91.9
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 4.5e-223 777.7 425 90.4
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 1.3e-222 776.2 425 89.9
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 1.1e-221 773.1 425 90.4
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 1.5e-221 772.7 425 89.6
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 1.9e-221 772.3 425 89.9
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 7.3e-221 770.4 425 89.6
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 9.5e-221 770.0 471 85.4
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 1.6e-220 769.2 425 88.5
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 2.8e-220 768.5 417 91.8
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 4.7e-220 767.7 425 89.6
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 6.1e-220 767.3 425 88.9
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 1.0e-219 766.5 425 89.6
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 1.0e-219 766.5 425 88.9
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 5.2e-219 764.2 425 89.2
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 1.5e-218 762.7 425 88.0
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 2.2e-217 758.8 425 87.5
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 2.9e-217 758.4 425 87.3
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.4e-217 757.3 424 87.3
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 1.1e-216 756.5 425 87.3
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 1.8e-216 755.7 425 88.5
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 1.8e-216 755.7 425 87.1
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.4e-216 755.4 424 87.3
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 5.4e-216 754.2 425 87.5
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 1.2e-215 753.1 425 86.4
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.7e-215 751.9 424 86.8
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 3.5e-215 751.5 425 86.8
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 4.6e-215 751.1 425 86.8
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 1.0e-214 750.0 425 86.4
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 1.7e-214 749.2 425 86.1
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.0e-214 748.4 422 86.7
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 5.0e-214 747.7 425 86.4
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 6.6e-214 747.3 425 85.6
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 8.6e-214 746.9 422 86.7
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 3.3e-213 745.0 421 86.7
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 4.3e-213 744.6 422 87.0
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 5.6e-213 744.2 425 86.6
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 7.3e-213 743.8 425 86.4
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 9.5e-213 743.4 438 84.2
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 2.1e-212 742.3 426 87.1
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 4.7e-212 741.1 425 85.4
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 4.7e-212 741.1 425 86.4
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 6.2e-212 740.7 425 86.1
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 6.2e-212 740.7 425 86.1
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 6.2e-212 740.7 425 86.1
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 1.1e-211 740.0 425 86.4
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.1e-211 740.0 414 87.9
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 1.4e-211 739.6 425 86.1
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 1.4e-211 739.6 425 86.1
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 1.8e-211 739.2 425 86.1
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 3.1e-211 738.4 425 84.9
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 5.2e-211 737.6 425 86.1
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 6.8e-211 737.3 425 86.1
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 6.8e-211 737.3 425 85.9
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 8.9e-211 736.9 426 85.9
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 1.2e-210 736.5 425 86.1
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 1.2e-210 736.5 425 85.2
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 2.0e-210 735.7 421 85.5
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 4.4e-210 734.6 425 85.9
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 5.8e-210 734.2 425 85.6
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 7.5e-210 733.8 426 85.4
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 1.7e-209 732.6 420 86.2
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 1.7e-209 732.6 425 84.5
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 1.7e-209 732.6 425 86.4
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 2.9e-209 731.9 438 84.7
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 4.9e-209 731.1 425 83.5
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 4.9e-209 731.1 424 84.7
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 6.4e-209 730.7 420 86.0
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 2.4e-208 728.8 425 83.8
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 9.2e-208 726.9 421 85.0
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 1.7e-206 722.6 415 86.0
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 3.9e-206 721.5 425 82.4
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 2.8e-204 715.3 413 86.2
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 4.7e-204 714.5 425 82.8
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 8.1e-204 713.8 425 84.0
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 1.4e-203 713.0 422 81.3
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 5.2e-203 711.1 425 81.4
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.6e-202 708.8 425 81.2
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 3.4e-202 708.4 425 85.2
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 4.4e-202 708.0 425 81.2
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 3.7e-201 704.9 420 81.9
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 8.3e-201 703.7 422 81.5
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 1.1e-200 703.4 424 80.7
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 3.2e-200 701.8 422 81.3
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 1.7e-198 696.0 424 79.5
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 4.3e-197 691.4 425 81.9
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 2.1e-196 689.1 425 81.6
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 2.0e-194 682.6 422 78.4
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.6e-194 682.2 419 80.2
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 4.9e-193 677.9 425 80.5
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 2.4e-192 675.6 425 79.3
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 5.1e-190 667.9 423 76.1
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 8.7e-190 667.2 423 76.6
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 5.6e-189 664.5 425 78.6
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 7.3e-189 664.1 416 80.0
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.4e-187 659.1 433 77.8
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 4.4e-186 654.8 611 59.4
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 5.8e-186 654.4 423 74.9
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 2.2e-185 652.5 423 74.9
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 6.4e-185 651.0 401 81.8
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 6.4e-185 651.0 413 79.7
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.1e-184 650.2 442 75.8
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 4.2e-184 648.3 422 78.0
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 3.0e-182 642.1 422 74.6
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 9.6e-181 637.1 417 76.7
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.1e-180 636.0 415 77.1
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.1e-180 634.0 412 76.0
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-179 633.3 406 76.8
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.4e-179 633.3 475 70.5
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.4e-179 632.5 416 75.0
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 2.2e-177 625.9 364 84.3
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 3.8e-177 625.2 410 75.6
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 4.9e-177 624.8 353 84.7
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 3.2e-176 622.1 425 71.5
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.7e-172 608.6 413 74.6
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 3.1e-171 605.5 339 87.6
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 4.0e-171 605.1 357 84.6
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 1.7e-169 599.7 340 87.6
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 2.9e-169 599.0 344 84.6
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 2.7e-167 592.4 430 70.0
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 1.8e-166 589.7 410 72.0
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.1e-163 580.5 413 69.2
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 4.0e-163 578.6 431 68.7
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 1.3e-161 573.5 411 66.7
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 3.8e-161 572.0 312 89.1
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 1.8e-158 563.1 415 70.1
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.7e-153 546.6 399 68.9
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 5.3e-147 525.0 303 84.5
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.0e-145 518.5 413 66.1
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 1.9e-144 516.5 423 62.4
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 7.7e-138 494.6 281 85.1
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 2.6e-133 479.6 442 58.8
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 2.6e-133 479.6 286 80.8
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 5.9e-130 468.4 435 57.2
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 8.0e-119 431.4 237 89.5
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 7.5e-117 424.9 431 52.0
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 2.8e-108 396.4 252 77.0
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 6.6e-105 385.2 436 49.1
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 9.8e-93 344.7 465 44.9
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.1e-88 331.3 199 84.4
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 6.2e-87 325.5 171 91.8
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 3.2e-83 313.2 410 42.2
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 4.3e-72 276.2 239 61.5
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 5.8e-69 265.8 168 76.8
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 9.9e-69 265.0 155 80.6
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 1.9e-64 250.8 166 75.3
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 1.1e-59 235.0 158 77.2
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 9.3e-59 231.9 256 56.2
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 4.3e-56 223.0 161 67.7
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 1.2e-37 161.8 96 82.3
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 1.8e-33 147.9 86 83.7
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 5.7e-32 142.9 86 77.9
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 1.8e-30 137.9 235 39.1
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 1.3e-28 131.7 126 58.7
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.1e-24 118.6 72 80.6
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 1.5e-21 108.2 129 49.6
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 1.9e-19 101.3 58 79.3
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 5.5e-19 99.8 95 58.9
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 3.6e-18 97.1 55 80.0
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 6.1e-18 96.3 168 39.9
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 4.8e-15 86.7 230 29.6
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 4.8e-15 86.7 55 69.1
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 7.0e-14 82.8 48 85.4
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 8.0e-10 69.3 47 72.3
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 1.4e-09 68.6 94 42.6
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 2.3e-09 67.8 70 50.0
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 4.0e-09 67.0 42 73.8
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 6.8e-09 66.2 38 84.2
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 2.6e-08 64.3 32 84.4
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 4.4e-08 63.5 44 65.9
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 6.3e-07 59.7 30 86.7


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