Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 4.6e-91 337.8 164 100.0
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.1e-71 273.5 145 87.6
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.7e-59 232.3 136 78.7
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.4e-58 229.9 138 76.8
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 2.3e-58 229.2 137 75.2
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.0e-58 228.8 143 74.1
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.0e-58 228.8 143 74.1
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 5.2e-58 228.0 137 75.9
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.2e-57 226.9 137 77.4
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.2e-57 226.9 138 76.8
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.2e-57 226.9 137 76.6
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.5e-57 226.5 141 75.9
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.0e-57 226.1 137 75.9
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 2.0e-57 226.1 143 75.5
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.6e-57 225.7 136 76.5
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.8e-57 223.8 137 75.9
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.3e-56 223.4 139 74.1
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 3.7e-56 221.9 139 74.8
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 4.8e-56 221.5 137 73.0
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.8e-55 219.5 156 67.9
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.8e-55 219.5 139 77.0
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 4.1e-55 218.4 139 70.5
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 4.1e-55 218.4 139 73.4
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 7.0e-55 217.6 141 75.2
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.6e-54 216.5 139 73.4
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 2.0e-54 216.1 133 72.9
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 2.0e-54 216.1 139 74.8
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.9e-54 214.5 137 70.1
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.3e-53 213.4 142 69.0
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.3e-53 213.4 137 70.8
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.3e-53 213.4 137 70.8
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.9e-53 212.2 139 70.5
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 3.8e-53 211.8 139 75.5
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 3.8e-53 211.8 139 71.2
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 3.8e-53 211.8 137 70.8
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.0e-53 211.5 132 75.0
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 6.5e-53 211.1 139 71.9
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.1e-52 210.3 139 69.8
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.1e-52 210.3 142 69.7
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.5e-52 209.9 134 74.6
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.5e-52 209.9 137 70.1
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.9e-52 209.5 137 71.5
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.9e-52 209.5 147 68.0
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 2.5e-52 209.1 137 69.3
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.5e-52 209.1 142 70.4
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 3.3e-52 208.8 139 73.4
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.3e-52 208.8 142 69.7
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 3.3e-52 208.8 138 67.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 4.2e-52 208.4 139 72.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 5.5e-52 208.0 137 70.8
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 7.2e-52 207.6 139 68.3
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 7.2e-52 207.6 138 72.5
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 9.5e-52 207.2 136 69.9
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 9.5e-52 207.2 134 68.7
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.6e-51 206.5 137 70.1
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.1e-51 206.1 137 71.5
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 3.6e-51 205.3 136 70.6
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 3.6e-51 205.3 136 70.6
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 4.7e-51 204.9 137 73.7
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 4.7e-51 204.9 133 70.7
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 8.0e-51 204.1 137 69.3
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.8e-50 203.0 139 70.5
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 2.3e-50 202.6 138 63.8
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 2.3e-50 202.6 139 69.8
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.3e-50 202.6 137 70.1
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 3.0e-50 202.2 139 69.1
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 3.0e-50 202.2 136 64.7
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 3.0e-50 202.2 136 64.7
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 3.0e-50 202.2 139 69.8
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 4.0e-50 201.8 138 63.8
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 6.8e-50 201.1 139 69.1
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 8.9e-50 200.7 136 64.0
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 8.9e-50 200.7 136 69.1
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.2e-49 200.3 120 80.0
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 2.0e-49 199.5 136 64.0
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 2.0e-49 199.5 139 70.5
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 4.4e-49 198.4 136 65.4
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 5.7e-49 198.0 136 65.4
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 5.7e-49 198.0 139 64.7
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 5.7e-49 198.0 139 64.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 7.5e-49 197.6 120 78.3
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 2.2e-48 196.1 139 64.0
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 2.2e-48 196.1 139 63.3
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 2.8e-48 195.7 140 62.1
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.8e-48 195.7 139 61.9
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 3.7e-48 195.3 140 62.9
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.4e-47 193.4 138 63.8
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.8e-47 193.0 129 69.8
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.8e-47 193.0 129 69.8
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 9.2e-47 190.7 139 62.6
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.2e-46 190.3 136 62.5
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.6e-46 189.9 135 63.7
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 2.0e-46 189.5 121 76.0
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.0e-46 189.5 121 76.0
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.7e-46 189.1 139 61.9
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 3.5e-46 188.7 131 68.7
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 5.9e-46 188.0 107 78.5
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 5.9e-46 188.0 143 60.1
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 5.9e-46 188.0 121 76.0
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.0e-45 187.2 134 61.9
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.0e-45 187.2 143 64.3
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.1e-44 183.7 118 73.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.5e-44 183.3 120 71.7
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 5.6e-44 181.4 120 70.8
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 8.0e-43 177.6 136 61.8
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 8.0e-43 177.6 138 60.1
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.0e-42 177.2 109 71.6
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 6.8e-42 174.5 137 61.3
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 6.8e-42 174.5 117 70.1
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.5e-41 173.3 119 66.4
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 2.0e-41 172.9 148 56.8
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 3.2e-39 165.6 109 67.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.5e-38 162.2 138 61.6
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.9e-37 158.7 137 55.5
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.1e-34 150.6 130 53.8
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 7.5e-33 144.4 108 57.4
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 9.8e-33 144.1 96 71.9
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 1.3e-32 143.7 121 53.7
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.3e-32 143.7 117 54.7
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.9e-32 142.5 112 63.4
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 8.3e-32 141.0 123 53.7
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 7.0e-31 137.9 93 69.9
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.1e-30 136.3 116 51.7
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 7.8e-30 134.4 117 53.8
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.0e-29 134.0 87 71.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 5.0e-29 131.7 124 50.8
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.4e-26 123.6 83 67.5
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 5.8e-25 118.2 123 46.3
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 9.5e-20 100.9 91 56.0
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 2.9e-16 89.4 89 51.7
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 6.6e-13 78.2 73 54.8
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 6.4e-08 61.6 48 60.4
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 7.8e-06 54.7 50 52.0


User provided reference genes

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