Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G082300 Populus trichocarpa HOM05D007870 ORTHO05D010015 6.8e-14 80.5 83 100.0
CDE09G0625 Ceratophyllum demersum HOM05D007870 ORTHO05D010015 7.0e-11 70.5 83 63.9
CDE11G0999 Ceratophyllum demersum HOM05D007870 ORTHO05D010015 7.0e-11 70.5 83 68.7
Thecc.01G360900 Theobroma cacao HOM05D007870 ORTHO05D010015 2.0e-10 68.9 83 72.3
Duzib138G1310 Durio zibethinus HOM05D007870 ORTHO05D010015 2.7e-10 68.6 83 84.3
Lalb_Chr04g0256851 Lupinus albus HOM05D007870 ORTHO05D010015 4.5e-10 67.8 83 84.3
Medtr8g031040 Medicago truncatula HOM05D007870 ORTHO05D010015 5.9e-10 67.4 83 83.1
Lalb_Chr10g0097081 Lupinus albus HOM05D007870 ORTHO05D010015 1.0e-09 66.6 83 69.9
Psat4g155360 Pisum sativum HOM05D007870 ORTHO05D010015 1.0e-09 66.6 83 73.5
SalBow3G1909 Salvia bowleyana HOM05D007870 ORTHO05D010015 3.8e-09 64.7 83 74.7
TPR.G39935 Trifolium pratense HOM05D007870 ORTHO05D010015 5.0e-09 64.3 83 86.7
PGR031G0106 Punica granatum HOM05D007870 ORTHO05D010015 6.5e-09 63.9 83 84.3
arahy.Tifrunner.gnm1.ann1.52J70V Arachis hypogaea HOM05D007870 ORTHO05D010015 8.5e-09 63.5 83 49.4
Lj3g0023390 Lotus japonicus HOM05D007870 ORTHO05D010015 8.5e-09 63.5 81 77.8
Nn6g33472 Nelumbo nucifera HOM05D007870 ORTHO05D010015 8.5e-09 63.5 83 75.9
SalBow1G0457 Salvia bowleyana HOM05D007870 ORTHO05D010015 8.5e-09 63.5 83 81.9
arahy.Tifrunner.gnm1.ann1.LLY2P5 Arachis hypogaea HOM05D007870 ORTHO05D010015 1.1e-08 63.2 83 49.4
MBI18_g40941_MAGBIO Magnolia biondii HOM05D007870 ORTHO05D010015 1.1e-08 63.2 83 89.2
Peaxi162Scf00056g00013 Petunia axillaris HOM05D007870 ORTHO05D010015 1.1e-08 63.2 83 81.9
Dinv43804 Davidia involucrata HOM05D007870 ORTHO05D010015 1.5e-08 62.8 83 66.3
vmacro13293 Vaccinium macrocarpon HOM05D007870 ORTHO05D010015 1.5e-08 62.8 84 73.8
vmacro23343 Vaccinium macrocarpon HOM05D007870 ORTHO05D010015 1.5e-08 62.8 84 73.8
TAR375G0654 Trochodendron aralioides HOM05D007870 ORTHO05D010015 1.9e-08 62.4 83 81.9
unitig_8.g3804 Utricularia gibba HOM05D007870 ORTHO05D010015 1.9e-08 62.4 83 47.0
QL08p049047 Quercus lobata HOM05D007870 ORTHO05D010015 3.2e-08 61.6 82 50.0
RcHm_v2.0_Chr1g0354641 Rosa chinensis HOM05D007870 ORTHO05D010015 3.2e-08 61.6 83 63.9
Actinidia10023 Actinidia chinensis HOM05D007870 ORTHO05D010015 5.5e-08 60.8 79 82.3
SGA_v2.0_scaffold4G02333 Striga asiatica HOM05D007870 ORTHO05D010015 5.5e-08 60.8 83 80.7
DCAR_025186 Daucus carota HOM05D007870 ORTHO05D010015 9.4e-08 60.1 83 44.6
FAN01G0023 Fragaria x ananassa HOM05D007870 ORTHO05D010015 9.4e-08 60.1 83 73.5
FAN03G1806 Fragaria x ananassa HOM05D007870 ORTHO05D010015 9.4e-08 60.1 83 71.1
FAN06G2504 Fragaria x ananassa HOM05D007870 ORTHO05D010015 9.4e-08 60.1 83 73.5
Cc02_g37830 Coffea canephora HOM05D007870 ORTHO05D010015 1.2e-07 59.7 83 67.5
Sopen01g038280 Solanum pennellii HOM05D007870 ORTHO05D010015 1.2e-07 59.7 83 44.6
PGSC0003DMG400000161 Solanum tuberosum HOM05D007870 ORTHO05D010015 1.2e-07 59.7 83 44.6
ATR0680G221 Amborella trichopoda HOM05D007870 ORTHO05D010015 1.6e-07 59.3 84 79.8
Aqoxy7G00343 Aquilegia oxysepala HOM05D007870 ORTHO05D010015 1.6e-07 59.3 83 73.5
MBI18_g19072_MAGBIO Magnolia biondii HOM05D007870 ORTHO05D010015 1.6e-07 59.3 83 88.0
MD01G1056300 Malus domestica HOM05D007870 ORTHO05D010015 1.6e-07 59.3 83 72.3
Cpa.g.sc18.241 Carica papaya HOM05D007870 ORTHO05D010015 2.1e-07 58.9 83 89.2
FAN06G1295 Fragaria x ananassa HOM05D007870 ORTHO05D010015 2.1e-07 58.9 83 66.3
FvH4_7g13990 Fragaria vesca HOM05D007870 ORTHO05D010015 3.6e-07 58.2 83 56.6
Gorai.004G158100 Gossypium raimondii HOM05D007870 ORTHO05D010015 4.7e-07 57.8 83 80.7
Phvul.010G097100 Phaseolus vulgaris HOM05D007870 ORTHO05D010015 8.0e-07 57.0 83 47.0
Manes.05G036400 Manihot esculenta HOM05D007870 ORTHO05D010015 1.0e-06 56.6 83 74.7
Os02g0824400 Oryza sativa ssp. japonica HOM05D007870 ORTHO05D010015 1.0e-06 56.6 83 45.8
MELO3C006117.2 Cucumis melo HOM05D007870 ORTHO05D010015 1.8e-06 55.8 83 49.4
Oeu056365.2 Olea europaea HOM05D007870 ORTHO05D010015 1.8e-06 55.8 111 38.7
TWI23G0891 Tripterygium wilfordii HOM05D007870 ORTHO05D010015 1.8e-06 55.8 83 66.3
Zm00001eb190830 Zea mays HOM05D007870 ORTHO05D010015 1.8e-06 55.8 83 59.0
CANSAT56G4347 Cannabis sativa HOM05D007870 ORTHO05D010015 6.8e-06 53.9 83 80.7
Rhsim07G0016800 Rhododendron simsii HOM05D007870 ORTHO05D010015 6.8e-06 53.9 33 84.8


User provided reference genes

Program Settings