Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 1.5e-286 988.8 497 100.0
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 1.3e-258 896.0 498 91.4
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 2.3e-178 629.4 498 66.3
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 7.3e-172 607.8 500 63.6
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 2.1e-171 606.3 480 66.0
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 6.2e-171 604.7 501 62.5
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 1.8e-170 603.2 500 63.4
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 3.1e-170 602.4 478 65.9
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 1.0e-165 587.4 497 60.8
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 1.0e-165 587.4 496 61.9
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 1.3e-165 587.0 495 60.0
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 1.7e-165 586.6 498 61.4
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 3.6e-163 578.9 498 60.6
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 3.6e-163 578.9 498 60.8
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 4.7e-163 578.6 498 62.0
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 1.1e-162 577.4 499 61.3
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.1e-162 577.4 498 60.8
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 1.2e-161 573.9 498 60.4
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 3.4e-161 572.4 498 61.2
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 5.8e-161 571.6 497 60.0
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 5.8e-161 571.6 498 60.2
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.6e-161 571.2 494 60.7
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.9e-159 566.6 494 60.1
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 7.1e-159 564.7 482 60.8
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 7.1e-159 564.7 497 60.2
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 9.2e-159 564.3 498 59.8
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 1.3e-157 560.5 496 58.7
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.3e-157 559.7 498 59.4
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 3.0e-157 559.3 483 59.8
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 6.6e-157 558.1 499 58.5
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 4.3e-156 555.4 497 59.8
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.3e-156 555.4 498 59.2
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 9.6e-156 554.3 497 58.4
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 2.8e-155 552.7 498 59.0
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 1.1e-154 550.8 488 58.8
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 1.5e-153 547.0 500 58.4
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 3.4e-153 545.8 488 58.6
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 7.6e-153 544.7 497 57.5
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 4.6e-150 535.4 484 57.2
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 3.0e-149 532.7 500 57.6
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 8.7e-149 531.2 484 57.9
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 8.7e-149 531.2 486 56.0
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 1.9e-148 530.0 501 56.1
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 1.6e-147 526.9 500 55.8
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 2.8e-147 526.2 481 56.3
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 6.2e-147 525.0 493 55.2
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 1.1e-146 524.2 498 58.0
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 6.9e-146 521.5 500 55.4
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 9.0e-146 521.2 491 55.8
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 1.5e-145 520.4 504 55.2
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 2.0e-145 520.0 478 56.3
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 2.9e-144 516.2 373 69.2
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 6.4e-144 515.0 501 54.5
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 1.4e-143 513.8 480 56.5
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 1.2e-142 510.8 488 53.9
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 1.2e-142 510.8 488 53.9
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 1.2e-142 510.8 498 55.0
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 2.7e-142 509.6 487 53.8
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 3.5e-142 509.2 492 54.9
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 4.6e-142 508.8 483 55.5
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 5.1e-141 505.4 498 54.6
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.5e-140 503.8 492 54.3
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 3.3e-140 502.7 494 53.8
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 1.6e-139 500.4 483 53.2
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 4.8e-139 498.8 494 53.6
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 6.2e-139 498.4 403 62.8
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 5.3e-138 495.4 475 53.3
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 5.3e-138 495.4 494 53.0
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 6.9e-138 495.0 487 52.8
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 9.0e-138 494.6 484 53.9
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 1.5e-137 493.8 484 55.8
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 2.6e-137 493.0 476 54.4
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 4.5e-137 492.3 482 53.9
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 4.5e-137 492.3 487 54.4
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 1.7e-136 490.3 481 52.2
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 6.4e-136 488.4 487 52.2
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.1e-135 487.6 497 51.3
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.9e-135 486.9 483 52.4
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 3.2e-135 486.1 498 53.0
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 9.3e-135 484.6 493 51.5
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.0e-133 481.1 498 51.6
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.8e-133 480.3 486 51.6
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 6.7e-133 478.4 485 51.8
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 1.1e-132 477.6 538 48.0
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 5.6e-132 475.3 496 51.0
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 2.1e-131 473.4 494 51.0
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 2.1e-131 473.4 373 63.3
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 2.4e-130 469.9 500 50.4
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 1.2e-129 467.6 478 52.7
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 3.4e-129 466.1 495 50.7
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 1.3e-128 464.2 489 51.5
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 8.4e-128 461.5 501 51.1
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 8.4e-128 461.5 466 52.6
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 5.5e-127 458.8 489 50.5
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 9.3e-127 458.0 485 53.2
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 3.0e-125 453.0 506 47.4
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 2.5e-124 449.9 499 49.7
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 3.3e-124 449.5 497 49.9
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 3.7e-123 446.0 493 49.9
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 4.8e-123 445.7 497 49.5
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 8.2e-123 444.9 383 58.7
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.4e-122 444.1 496 51.8
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.3e-120 437.6 491 49.5
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 2.9e-120 436.4 488 49.0
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 5.0e-120 435.6 499 48.9
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 9.3e-119 431.4 504 46.8
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 1.1e-114 417.9 486 47.5
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 1.8e-114 417.2 495 48.3
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 3.1e-106 389.8 527 42.9
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 6.9e-106 388.7 443 49.2
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 4.4e-100 369.4 420 47.6
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 3.7e-99 366.3 412 50.5
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 4.1e-98 362.8 376 52.4
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 5.3e-98 362.5 328 57.0
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 2.6e-97 360.1 472 44.5
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 5.5e-95 352.4 479 44.1
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 4.1e-90 336.3 290 58.6
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 5.3e-90 335.9 289 58.1
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 4.2e-87 326.2 414 45.7
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 9.4e-87 325.1 289 57.1
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 4.7e-86 322.8 490 38.8
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 8.0e-86 322.0 497 40.4
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 1.8e-85 320.9 451 42.6
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 8.8e-85 318.5 253 61.7
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 2.5e-79 300.4 394 45.9
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.7e-75 287.7 356 44.7
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 3.1e-74 283.5 293 49.5
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 3.8e-72 276.6 171 81.9
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 1.6e-70 271.2 432 38.4
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 4.7e-70 269.6 184 73.9
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 8.9e-69 265.4 375 41.3
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 5.0e-64 249.6 293 49.5
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 5.6e-63 246.1 254 53.5
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 7.3e-63 245.7 237 54.0
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 6.2e-62 242.7 488 33.2
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.7e-59 233.4 380 38.4
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 4.1e-58 229.9 540 29.8
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 7.0e-58 229.2 160 66.9
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 4.6e-57 226.5 184 63.6
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 1.7e-56 224.6 624 30.4
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.6e-54 218.0 221 50.2
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 1.6e-54 218.0 488 30.5
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 3.6e-54 216.9 324 40.7
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 4.7e-54 216.5 488 31.4
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 1.1e-53 215.3 473 32.6
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 1.2e-52 211.8 578 30.1
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 6.4e-51 206.1 487 30.4
Peaxi162Scf00153g01322 Petunia axillaris HOM05D001952 ORTHO05D004913 8.6e-48 195.7 253 45.1
Sabra14G0053500 Salix brachista HOM05D001952 ORTHO05D004913 1.1e-45 188.7 308 42.9
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 2.3e-45 187.6 427 31.4
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.9e-42 177.9 284 39.8
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 2.4e-42 177.6 212 48.6
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 9.2e-42 175.6 359 33.7
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 9.2e-42 175.6 270 40.4
TPR.G23686 Trifolium pratense HOM05D001952 ORTHO05D012360 5.6e-39 166.4 458 30.1
Oeu061480.1 Olea europaea HOM05D001952 ORTHO05D004913 1.1e-34 152.1 494 29.6
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 3.3e-31 140.6 146 56.2
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.1e-30 137.9 98 64.3
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 3.6e-30 137.1 122 51.6
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 4.0e-29 133.7 128 53.1
Sopen04g024480 Solanum pennellii HOM05D001952 ORTHO05D004913 1.2e-28 132.1 93 67.7
Nitab4.5_0001040g0030 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.3e-27 128.6 115 60.9
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 1.8e-24 118.2 145 49.0
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 1.6e-22 111.7 131 45.0
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 4.8e-22 110.2 130 44.6
Duzib268G0813 Durio zibethinus HOM05D001952 ORTHO05D004913 1.4e-21 108.6 129 49.6
Cre08.g374300 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D004913 1.2e-17 95.5 103 44.7
arahy.Tifrunner.gnm1.ann1.6B0T5V Arachis hypogaea HOM05D001952 ORTHO05D004913 5.1e-16 90.1 147 36.7
MCO07G121 Micromonas commoda HOM05D001952 ORTHO05D004913 4.8e-14 83.6 170 28.2
FAN03G1970 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.5e-10 71.2 72 50.0


User provided reference genes

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